RNA–Protein interactions for RNA: ENST00000539548.6

CDH13-204, Transcript of cadherin 13, humanhuman

TSL 2

Gene CDH13, Length 2,199 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-204ENST00000539548 DRICH1Q6PGQ1 229 aaPredicted RBP10.25□□□□□ -0.77
CDH13-204ENST00000539548 SAMD1Q6SPF0 538 aaPredicted RBP10.25□□□□□ -0.77
CDH13-204ENST00000539548 FAM47EQ6ZV65 393 aa10.25□□□□□ -0.77
CDH13-204ENST00000539548 BZW1Q7L1Q6 419 aaKnown RBP10.25□□□□□ -0.77
CDH13-204ENST00000539548 SAMD3Q8N6K7 520 aa10.25□□□□□ -0.77
CDH13-204ENST00000539548 ZNF516Q92618 1163 aa10.25□□□□□ -0.77
CDH13-204ENST00000539548 INPP5DQ92835 1189 aa10.25□□□□□ -0.77
CDH13-204ENST00000539548 UTP4Q969X6 686 aaKnown RBP10.25□□□□□ -0.77
CDH13-204ENST00000539548 TMEM237Q96Q45 408 aa10.25□□□□□ -0.77
CDH13-204ENST00000539548 TRABDQ9H4I3 376 aa10.25□□□□□ -0.77
CDH13-204ENST00000539548 MAP3K20Q9NYL2 800 aaKnown RBP10.25□□□□□ -0.77
CDH13-204ENST00000539548 SENP1Q9P0U3 644 aa10.25□□□□□ -0.77
CDH13-204ENST00000539548 PHTF1Q9UMS5 762 aa10.25□□□□□ -0.77
CDH13-204ENST00000539548 SMG5Q9UPR3 1016 aaKnown RBP10.25□□□□□ -0.77
CDH13-204ENST00000539548 NFASCO94856 1347 aa10.24□□□□□ -0.77
CDH13-204ENST00000539548 EXOC1LA0A1B0GW35 172 aa10.24□□□□□ -0.77
CDH13-204ENST00000539548 WDR64B1ANS9 1081 aa10.24□□□□□ -0.77
CDH13-204ENST00000539548 DNALI1O14645 258 aaPredicted RBP10.24□□□□□ -0.77
CDH13-204ENST00000539548 ATP2A2P16615 1042 aaKnown RBP10.24□□□□□ -0.77
CDH13-204ENST00000539548 ALDH3A1P30838 453 aa10.24□□□□□ -0.77
CDH13-204ENST00000539548 ADCY1Q08828 1119 aa10.24□□□□□ -0.77
CDH13-204ENST00000539548 MAMLD1Q13495 774 aa10.24□□□□□ -0.77
CDH13-204ENST00000539548 RASA2Q15283 850 aa10.24□□□□□ -0.77
CDH13-204ENST00000539548 BRDTQ58F21 947 aaPredicted RBP10.24□□□□□ -0.77
CDH13-204ENST00000539548 WDR44Q5JSH3 913 aa10.24□□□□□ -0.77
CDH13-204ENST00000539548 PLEKHA7Q6IQ23 1121 aa10.24□□□□□ -0.77
CDH13-204ENST00000539548 CYP4F22Q6NT55 531 aa10.24□□□□□ -0.77
CDH13-204ENST00000539548 MIS18BP1Q6P0N0 1132 aa10.24□□□□□ -0.77
CDH13-204ENST00000539548 LLGL2Q6P1M3 1020 aa10.24□□□□□ -0.77
CDH13-204ENST00000539548 GSTA5Q7RTV2 222 aa10.24□□□□□ -0.77
CDH13-204ENST00000539548 PHF13Q86YI8 300 aaPredicted RBP10.24□□□□□ -0.77
CDH13-204ENST00000539548 RCOR2Q8IZ40 523 aa10.24□□□□□ -0.77
CDH13-204ENST00000539548 SYTL5Q8TDW5 730 aaPredicted RBP10.24□□□□□ -0.77
CDH13-204ENST00000539548 BSNDQ8WZ55 320 aa10.24□□□□□ -0.77
CDH13-204ENST00000539548 FAXDC2Q96IV6 333 aa10.24□□□□□ -0.77
CDH13-204ENST00000539548 KIFC3Q9BVG8 833 aa10.24□□□□□ -0.77
CDH13-204ENST00000539548 PPCSQ9HAB8 311 aa10.24□□□□□ -0.77
CDH13-204ENST00000539548 KIAA1586Q9HCI6 787 aa10.24□□□□□ -0.77
CDH13-204ENST00000539548 SAYSD1Q9NPB0 183 aa10.24□□□□□ -0.77
CDH13-204ENST00000539548 CHKBQ9Y259 395 aa10.24□□□□□ -0.77
CDH13-204ENST00000539548 DRG1Q9Y295 367 aaKnown RBP10.24□□□□□ -0.77
CDH13-204ENST00000539548 ALOX15BO15296 676 aa10.24□□□□□ -0.77
CDH13-204ENST00000539548 LIASO43766 372 aa10.24□□□□□ -0.77
CDH13-204ENST00000539548 TBC1D12O60347 775 aa10.24□□□□□ -0.77
CDH13-204ENST00000539548 SPAG7O75391 227 aa10.24□□□□□ -0.77
CDH13-204ENST00000539548 DCTN3O75935 186 aa10.24□□□□□ -0.77
CDH13-204ENST00000539548 CCNE2O96020 404 aa10.24□□□□□ -0.77
CDH13-204ENST00000539548 DSG3P32926 999 aa10.24□□□□□ -0.77
CDH13-204ENST00000539548 KRT76Q01546 638 aa10.24□□□□□ -0.77
CDH13-204ENST00000539548 PDK4Q16654 411 aa10.24□□□□□ -0.77
CDH13-204ENST00000539548 SPDYAQ5MJ70 313 aa10.24□□□□□ -0.77
CDH13-204ENST00000539548 DAB2IPQ5VWQ8 1189 aa10.24□□□□□ -0.77
CDH13-204ENST00000539548 PPP1R2P3Q6NXS1 205 aa10.24□□□□□ -0.77
CDH13-204ENST00000539548 ANO5Q75V66 913 aa10.24□□□□□ -0.77
CDH13-204ENST00000539548 PRUNE1Q86TP1 453 aa10.24□□□□□ -0.77
CDH13-204ENST00000539548 VSIG1Q86XK7 387 aa10.24□□□□□ -0.77
CDH13-204ENST00000539548 KIRREL3Q8IZU9 778 aa10.24□□□□□ -0.77
CDH13-204ENST00000539548 ABRAQ8N0Z2 381 aa10.24□□□□□ -0.77
CDH13-204ENST00000539548 RDM1Q8NG50 284 aa10.24□□□□□ -0.77
CDH13-204ENST00000539548 LRRC37BQ96QE4 947 aa10.24□□□□□ -0.77
CDH13-204ENST00000539548 FAM118BQ9BPY3 351 aa10.24□□□□□ -0.77
CDH13-204ENST00000539548 PAIP2Q9BPZ3 127 aaKnown RBP10.24□□□□□ -0.77
CDH13-204ENST00000539548 SCINQ9Y6U3 715 aa10.24□□□□□ -0.77
CDH13-204ENST00000539548 SPDYE2BA6NHP3 402 aa10.23□□□□□ -0.77
CDH13-204ENST00000539548 LIN7AO14910 233 aaPredicted RBP10.23□□□□□ -0.77
CDH13-204ENST00000539548 EDF1O60869 148 aaKnown RBP10.23□□□□□ -0.77
CDH13-204ENST00000539548 ATP9AO75110 1047 aa10.23□□□□□ -0.77
CDH13-204ENST00000539548 C4BPAP04003 597 aaKnown RBP10.23□□□□□ -0.77
CDH13-204ENST00000539548 SPDYE6P0CI01 402 aa10.23□□□□□ -0.77
CDH13-204ENST00000539548 CD58P19256 250 aa10.23□□□□□ -0.77
CDH13-204ENST00000539548 ACO1P21399 889 aaKnown RBP10.23□□□□□ -0.77
CDH13-204ENST00000539548 PAX7P23759 505 aa10.23□□□□□ -0.77
CDH13-204ENST00000539548 NOMO3P69849 1222 aa10.23□□□□□ -0.77
CDH13-204ENST00000539548 C1QBPQ07021 282 aaKnown RBP10.23□□□□□ -0.77
CDH13-204ENST00000539548 NFX1Q12986 1120 aaKnown RBP10.23□□□□□ -0.77
CDH13-204ENST00000539548 DNAJC3Q13217 504 aa10.23□□□□□ -0.77
CDH13-204ENST00000539548 PKN2Q16513 984 aaKnown RBP10.23□□□□□ -0.77
CDH13-204ENST00000539548 ZACNQ401N2 412 aa10.23□□□□□ -0.77
CDH13-204ENST00000539548 C2CD6Q53TS8 623 aa10.23□□□□□ -0.77
CDH13-204ENST00000539548 EAPPQ56P03 285 aaPredicted RBP10.23□□□□□ -0.77
CDH13-204ENST00000539548 ANKRD20A2Q5SQ80 823 aa10.23□□□□□ -0.77
CDH13-204ENST00000539548 ANKRD20A1Q5TYW2 823 aa10.23□□□□□ -0.77
CDH13-204ENST00000539548 ANKRD20A3Q5VUR7 823 aa10.23□□□□□ -0.77
CDH13-204ENST00000539548 STYK1Q6J9G0 422 aa10.23□□□□□ -0.77
CDH13-204ENST00000539548 KRT27Q7Z3Y8 459 aa10.23□□□□□ -0.77
CDH13-204ENST00000539548 TAAR1Q96RJ0 339 aa10.23□□□□□ -0.77
CDH13-204ENST00000539548 C11orf70Q9BRQ4 267 aa10.23□□□□□ -0.77
CDH13-204ENST00000539548 FAM213AQ9BRX8 229 aa10.23□□□□□ -0.77
CDH13-204ENST00000539548 TRIM6Q9C030 488 aaPredicted RBP10.23□□□□□ -0.77
CDH13-204ENST00000539548 ZNF70Q9UC06 446 aaPredicted RBP10.23□□□□□ -0.77
CDH13-204ENST00000539548 CNTNAP1P78357 1384 aa10.22□□□□□ -0.77
CDH13-204ENST00000539548 E7ENQ6 273 aa10.22□□□□□ -0.77
CDH13-204ENST00000539548 NDC80O14777 642 aa10.22□□□□□ -0.77
CDH13-204ENST00000539548 HGSO14964 777 aaPredicted RBP10.22□□□□□ -0.77
CDH13-204ENST00000539548 EXTL3O43909 919 aa10.22□□□□□ -0.77
CDH13-204ENST00000539548 HLA-DRAP01903 254 aa10.22□□□□□ -0.77
CDH13-204ENST00000539548 GNAZP19086 355 aa10.22□□□□□ -0.77
CDH13-204ENST00000539548 RTP1P59025 263 aa10.22□□□□□ -0.77
CDH13-204ENST00000539548 PSMD6Q15008 389 aa10.22□□□□□ -0.77
CDH13-204ENST00000539548 MORF4L2Q15014 288 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 84 ms