RNA–Protein interactions for RNA: ENST00000538253.5

PTPN22-211, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

TSL 1 (best) BASIC

Gene PTPN22, Length 3,575 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-211ENST00000538253 ARMC3Q5W041 872 aa3.83□□□□□ -1.8
PTPN22-211ENST00000538253 MYLK4Q86YV6 388 aaPredicted RBP3.83□□□□□ -1.8
PTPN22-211ENST00000538253 FUBP3Q96I24 572 aaKnown RBP eCLIP3.83□□□□□ -1.8
PTPN22-211ENST00000538253 PLIN2Q99541 437 aa3.83□□□□□ -1.8
PTPN22-211ENST00000538253 TTPALQ9BTX7 342 aa3.83□□□□□ -1.8
PTPN22-211ENST00000538253 ZNF576Q9H609 170 aa3.83□□□□□ -1.8
PTPN22-211ENST00000538253 ZDHHC7Q9NXF8 308 aa3.83□□□□□ -1.8
PTPN22-211ENST00000538253 KIAA1522Q9P206 1035 aaPredicted RBP3.83□□□□□ -1.8
PTPN22-211ENST00000538253 PRKAG3Q9UGI9 489 aa3.83□□□□□ -1.8
PTPN22-211ENST00000538253 ADAM28Q9UKQ2 775 aa3.83□□□□□ -1.8
PTPN22-211ENST00000538253 INPP5FQ9Y2H2 1132 aa3.83□□□□□ -1.8
PTPN22-211ENST00000538253 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP3.83□□□□□ -1.8
PTPN22-211ENST00000538253 IRAK3Q9Y616 596 aa3.83□□□□□ -1.8
PTPN22-211ENST00000538253 BAZ2BQ9UIF8 2168 aaKnown RBP3.83□□□□□ -1.8
PTPN22-211ENST00000538253 PPP1R37O75864 691 aa3.83□□□□□ -1.8
PTPN22-211ENST00000538253 UPP2O95045 317 aa3.83□□□□□ -1.8
PTPN22-211ENST00000538253 AFPP02771 609 aaKnown RBP3.83□□□□□ -1.8
PTPN22-211ENST00000538253 ADRB2P07550 413 aa3.83□□□□□ -1.8
PTPN22-211ENST00000538253 CTSAP10619 480 aa3.83□□□□□ -1.8
PTPN22-211ENST00000538253 HARSP12081 509 aaKnown RBP3.83□□□□□ -1.8
PTPN22-211ENST00000538253 FOSL2P15408 326 aa3.83□□□□□ -1.8
PTPN22-211ENST00000538253 VAMP7P51809 220 aa3.83□□□□□ -1.8
PTPN22-211ENST00000538253 ZNF200P98182 395 aaPredicted RBP3.83□□□□□ -1.8
PTPN22-211ENST00000538253 BFSP1Q12934 665 aa3.83□□□□□ -1.8
PTPN22-211ENST00000538253 MAPK7Q13164 816 aa3.83□□□□□ -1.8
PTPN22-211ENST00000538253 SHHQ15465 462 aa3.83□□□□□ -1.8
PTPN22-211ENST00000538253 SNRNP35Q16560 246 aaKnown RBP3.83□□□□□ -1.8
PTPN22-211ENST00000538253 MAN2A1Q16706 1144 aa3.83□□□□□ -1.8
PTPN22-211ENST00000538253 TBC1D25Q3MII6 688 aa3.83□□□□□ -1.8
PTPN22-211ENST00000538253 TCERG1LQ5VWI1 586 aa3.83□□□□□ -1.8
PTPN22-211ENST00000538253 CEP135Q66GS9 1140 aa3.83□□□□□ -1.8
PTPN22-211ENST00000538253 NAIF1Q69YI7 327 aaPredicted RBP3.83□□□□□ -1.8
PTPN22-211ENST00000538253 CENPPQ6IPU0 288 aa3.83□□□□□ -1.8
PTPN22-211ENST00000538253 TRIM72Q6ZMU5 477 aa3.83□□□□□ -1.8
PTPN22-211ENST00000538253 CCDC117Q8IWD4 279 aaPredicted RBP3.83□□□□□ -1.8
PTPN22-211ENST00000538253 ADSSL1Q8N142 457 aa3.83□□□□□ -1.8
PTPN22-211ENST00000538253 SLC39A11Q8N1S5 342 aa3.83□□□□□ -1.8
PTPN22-211ENST00000538253 NELFBQ8WX92 580 aa3.83□□□□□ -1.8
PTPN22-211ENST00000538253 FBXL18Q96ME1 805 aa3.83□□□□□ -1.8
PTPN22-211ENST00000538253 DDX50Q9BQ39 737 aaKnown RBP3.83□□□□□ -1.8
PTPN22-211ENST00000538253 TLE6Q9H808 572 aa3.83□□□□□ -1.8
PTPN22-211ENST00000538253 INTS13Q9NVM9 706 aa3.83□□□□□ -1.8
PTPN22-211ENST00000538253 MKS1Q9NXB0 559 aa3.83□□□□□ -1.8
PTPN22-211ENST00000538253 CPSF3Q9UKF6 684 aaKnown RBP3.83□□□□□ -1.8
PTPN22-211ENST00000538253 ITM2BQ9Y287 266 aa3.83□□□□□ -1.8
PTPN22-211ENST00000538253 PP2D1A8MPX8 630 aa3.83□□□□□ -1.8
PTPN22-211ENST00000538253 PODXLO00592 558 aa3.83□□□□□ -1.8
PTPN22-211ENST00000538253 RTN3O95197 1032 aaPredicted RBP3.83□□□□□ -1.8
PTPN22-211ENST00000538253 GLUD1P00367 558 aa3.83□□□□□ -1.8
PTPN22-211ENST00000538253 LRG1P02750 347 aa3.83□□□□□ -1.8
PTPN22-211ENST00000538253 ACRP10323 421 aa3.83□□□□□ -1.8
PTPN22-211ENST00000538253 MSNP26038 577 aaKnown RBP3.83□□□□□ -1.8
PTPN22-211ENST00000538253 POLR2BP30876 1174 aaKnown RBP3.83□□□□□ -1.8
PTPN22-211ENST00000538253 CA8P35219 290 aa3.83□□□□□ -1.8
PTPN22-211ENST00000538253 PIK3CAP42336 1068 aa3.83□□□□□ -1.8
PTPN22-211ENST00000538253 KPNA1P52294 538 aaPredicted RBP3.83□□□□□ -1.8
PTPN22-211ENST00000538253 EPHB3P54753 998 aa3.83□□□□□ -1.8
PTPN22-211ENST00000538253 TFAMQ00059 246 aaKnown RBP3.83□□□□□ -1.8
PTPN22-211ENST00000538253 ADCY2Q08462 1091 aa3.83□□□□□ -1.8
PTPN22-211ENST00000538253 TMEM62Q0P6H9 643 aa3.83□□□□□ -1.8
PTPN22-211ENST00000538253 MORC3Q14149 939 aa3.83□□□□□ -1.8
PTPN22-211ENST00000538253 ATAT1Q5SQI0 421 aa3.83□□□□□ -1.8
PTPN22-211ENST00000538253 CYP4A22Q5TCH4 519 aa3.83□□□□□ -1.8
PTPN22-211ENST00000538253 VSTM1Q6UX27 236 aa3.83□□□□□ -1.8
PTPN22-211ENST00000538253 EPM2AIP1Q7L775 607 aaPredicted RBP3.83□□□□□ -1.8
PTPN22-211ENST00000538253 ENGASEQ8NFI3 743 aa3.83□□□□□ -1.8
PTPN22-211ENST00000538253 HELQQ8TDG4 1101 aa3.83□□□□□ -1.8
PTPN22-211ENST00000538253 ZNF689Q96CS4 500 aaPredicted RBP3.83□□□□□ -1.8
PTPN22-211ENST00000538253 TRIM11Q96F44 468 aa3.83□□□□□ -1.8
PTPN22-211ENST00000538253 IGSF21Q96ID5 467 aa3.83□□□□□ -1.8
PTPN22-211ENST00000538253 SUSD3Q96L08 255 aa3.83□□□□□ -1.8
PTPN22-211ENST00000538253 MFSD14AQ96MC6 490 aa3.83□□□□□ -1.8
PTPN22-211ENST00000538253 PCMTD1Q96MG8 357 aaPredicted RBP3.83□□□□□ -1.8
PTPN22-211ENST00000538253 PPP1R9BQ96SB3 815 aa3.83□□□□□ -1.8
PTPN22-211ENST00000538253 APOL6Q9BWW8 343 aa3.83□□□□□ -1.8
PTPN22-211ENST00000538253 RSPH9Q9H1X1 276 aaPredicted RBP3.83□□□□□ -1.8
PTPN22-211ENST00000538253 NKX2-4Q9H2Z4 354 aa3.83□□□□□ -1.8
PTPN22-211ENST00000538253 TSPY26PQ9H489 355 aa3.83□□□□□ -1.8
PTPN22-211ENST00000538253 VRTNQ9H8Y1 702 aa3.83□□□□□ -1.8
PTPN22-211ENST00000538253 SFXN1Q9H9B4 322 aa3.83□□□□□ -1.8
PTPN22-211ENST00000538253 KIF9Q9HAQ2 790 aa3.83□□□□□ -1.8
PTPN22-211ENST00000538253 PIDD1Q9HB75 910 aa3.83□□□□□ -1.8
PTPN22-211ENST00000538253 TBC1D13Q9NVG8 400 aa3.83□□□□□ -1.8
PTPN22-211ENST00000538253 HAUS2Q9NVX0 235 aa3.83□□□□□ -1.8
PTPN22-211ENST00000538253 DPP3Q9NY33 737 aa3.83□□□□□ -1.8
PTPN22-211ENST00000538253 UTP6Q9NYH9 597 aaKnown RBP3.83□□□□□ -1.8
PTPN22-211ENST00000538253 CDH9Q9ULB4 789 aa3.83□□□□□ -1.8
PTPN22-211ENST00000538253 STXBP5LQ9Y2K9 1186 aa3.83□□□□□ -1.8
PTPN22-211ENST00000538253 PCDHA5Q9Y5H7 936 aa3.83□□□□□ -1.8
PTPN22-211ENST00000538253 BZW2Q9Y6E2 419 aaKnown RBP3.83□□□□□ -1.8
PTPN22-211ENST00000538253 KAT6AQ92794 2004 aa3.83□□□□□ -1.8
PTPN22-211ENST00000538253 TRIM66O15016 1216 aa3.82□□□□□ -1.8
PTPN22-211ENST00000538253 TACC1O75410 805 aa3.82□□□□□ -1.8
PTPN22-211ENST00000538253 GFPT2O94808 682 aa3.82□□□□□ -1.8
PTPN22-211ENST00000538253 MICAL2O94851 1124 aa3.82□□□□□ -1.8
PTPN22-211ENST00000538253 CDC25CP30307 473 aa3.82□□□□□ -1.8
PTPN22-211ENST00000538253 ACADSBP45954 432 aa3.82□□□□□ -1.8
PTPN22-211ENST00000538253 CYP2J2P51589 502 aa3.82□□□□□ -1.8
PTPN22-211ENST00000538253 MARSP56192 900 aaKnown RBP3.82□□□□□ -1.8
PTPN22-211ENST00000538253 BCAR1P56945 870 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms