RNA–Protein interactions for RNA: ENST00000538136.1

MSH6-209, Transcript of mutS homolog 6, humanhuman

TSL 2 BASIC

Gene MSH6, Length 4,055 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-209ENST00000538136 LEKR1Q6ZMV7 388 aa7.73□□□□□ -1.17
MSH6-209ENST00000538136 ECHDC2Q86YB7 292 aa7.73□□□□□ -1.17
MSH6-209ENST00000538136 ADGRF2Q8IZF7 708 aa7.73□□□□□ -1.17
MSH6-209ENST00000538136 NME8Q8N427 588 aa7.73□□□□□ -1.17
MSH6-209ENST00000538136 TRAF3IP1Q8TDR0 691 aaPredicted RBP7.73□□□□□ -1.17
MSH6-209ENST00000538136 DNAJC19Q96DA6 116 aa7.73□□□□□ -1.17
MSH6-209ENST00000538136 DHTKD1Q96HY7 919 aaPredicted RBP7.73□□□□□ -1.17
MSH6-209ENST00000538136 PAK6Q9NQU5 681 aaPredicted RBP7.73□□□□□ -1.17
MSH6-209ENST00000538136 RAB20Q9NX57 234 aa7.73□□□□□ -1.17
MSH6-209ENST00000538136 SEL1LQ9UBV2 794 aa7.73□□□□□ -1.17
MSH6-209ENST00000538136 OGDHLQ9ULD0 1010 aa7.73□□□□□ -1.17
MSH6-209ENST00000538136 HSFX4A0A1B0GTS1 333 aaPredicted RBP7.73□□□□□ -1.17
MSH6-209ENST00000538136 HSFX3A0A1B0GWH4 333 aaPredicted RBP7.73□□□□□ -1.17
MSH6-209ENST00000538136 MDM4O15151 490 aa7.73□□□□□ -1.17
MSH6-209ENST00000538136 TSPAN3O60637 253 aa7.73□□□□□ -1.17
MSH6-209ENST00000538136 NSFP46459 744 aaKnown RBP7.73□□□□□ -1.17
MSH6-209ENST00000538136 NTHL1P78549 312 aa7.73□□□□□ -1.17
MSH6-209ENST00000538136 MTM1Q13496 603 aa7.73□□□□□ -1.17
MSH6-209ENST00000538136 PSMD5Q16401 504 aa7.73□□□□□ -1.17
MSH6-209ENST00000538136 POM121L1PQ3SYA9 428 aa7.73□□□□□ -1.17
MSH6-209ENST00000538136 PPM1LQ5SGD2 360 aa7.73□□□□□ -1.17
MSH6-209ENST00000538136 SFMBT2Q5VUG0 894 aa7.73□□□□□ -1.17
MSH6-209ENST00000538136 SAMD3Q8N6K7 520 aa7.73□□□□□ -1.17
MSH6-209ENST00000538136 SLC17A8Q8NDX2 589 aa7.73□□□□□ -1.17
MSH6-209ENST00000538136 SMG7Q92540 1137 aaKnown RBP7.73□□□□□ -1.17
MSH6-209ENST00000538136 C7orf25Q9BPX7 421 aa7.73□□□□□ -1.17
MSH6-209ENST00000538136 SMG9Q9H0W8 520 aaKnown RBP7.73□□□□□ -1.17
MSH6-209ENST00000538136 IL23AQ9NPF7 189 aa7.73□□□□□ -1.17
MSH6-209ENST00000538136 BARX2Q9UMQ3 279 aaPredicted RBP7.73□□□□□ -1.17
MSH6-209ENST00000538136 KPNA7A9QM74 516 aa7.72□□□□□ -1.17
MSH6-209ENST00000538136 F8VP50 259 aa7.72□□□□□ -1.17
MSH6-209ENST00000538136 CREB3O43889 395 aa7.72□□□□□ -1.17
MSH6-209ENST00000538136 EXTL3O43909 919 aa7.72□□□□□ -1.17
MSH6-209ENST00000538136 FGF18O76093 207 aa7.72□□□□□ -1.17
MSH6-209ENST00000538136 CD72P21854 359 aa7.72□□□□□ -1.17
MSH6-209ENST00000538136 TKTP29401 623 aaKnown RBP7.72□□□□□ -1.17
MSH6-209ENST00000538136 AVPR1AP37288 418 aa7.72□□□□□ -1.17
MSH6-209ENST00000538136 MRE11P49959 708 aa7.72□□□□□ -1.17
MSH6-209ENST00000538136 SYCP2LQ5T4T6 812 aa7.72□□□□□ -1.17
MSH6-209ENST00000538136 ZNF410Q86VK4 478 aa7.72□□□□□ -1.17
MSH6-209ENST00000538136 HERC6Q8IVU3 1022 aa7.72□□□□□ -1.17
MSH6-209ENST00000538136 CYFIP2Q96F07 1278 aa7.72□□□□□ -1.17
MSH6-209ENST00000538136 CTAGE1Q96RT6 745 aa7.72□□□□□ -1.17
MSH6-209ENST00000538136 PDZD7Q9H5P4 517 aa7.72□□□□□ -1.17
MSH6-209ENST00000538136 ZWILCHQ9H900 591 aa7.72□□□□□ -1.17
MSH6-209ENST00000538136 EDIL3O43854 480 aa7.72□□□□□ -1.17
MSH6-209ENST00000538136 CYP2F1P24903 491 aa7.72□□□□□ -1.17
MSH6-209ENST00000538136 GUCY2CP25092 1073 aa7.72□□□□□ -1.17
MSH6-209ENST00000538136 GNA15P30679 374 aa7.72□□□□□ -1.17
MSH6-209ENST00000538136 GTF2H1P32780 548 aa7.72□□□□□ -1.17
MSH6-209ENST00000538136 MFAP3P55082 362 aa7.72□□□□□ -1.17
MSH6-209ENST00000538136 TFF2Q03403 129 aa7.72□□□□□ -1.17
MSH6-209ENST00000538136 PPP3CAQ08209 521 aa7.72□□□□□ -1.17
MSH6-209ENST00000538136 MAN2A1Q16706 1144 aa7.72□□□□□ -1.17
MSH6-209ENST00000538136 MAB21L3Q8N8X9 362 aa7.72□□□□□ -1.17
MSH6-209ENST00000538136 SLC2A14Q8TDB8 520 aa7.72□□□□□ -1.17
MSH6-209ENST00000538136 ZNF560Q96MR9 790 aa7.72□□□□□ -1.17
MSH6-209ENST00000538136 CALN1Q9BXU9 219 aa7.72□□□□□ -1.17
MSH6-209ENST00000538136 WNT8AQ9H1J5 351 aa7.72□□□□□ -1.17
MSH6-209ENST00000538136 GOLPH3Q9H4A6 298 aa7.72□□□□□ -1.17
MSH6-209ENST00000538136 SLC38A7Q9NVC3 462 aa7.72□□□□□ -1.17
MSH6-209ENST00000538136 NDRG2Q9UN36 371 aaKnown RBP7.72□□□□□ -1.17
MSH6-209ENST00000538136 ASCC3Q8N3C0 2202 aaKnown RBP7.72□□□□□ -1.17
MSH6-209ENST00000538136 IFNB1P01574 187 aa7.72□□□□□ -1.17
MSH6-209ENST00000538136 SLC11A1P49279 550 aa7.72□□□□□ -1.17
MSH6-209ENST00000538136 NDST1P52848 882 aa7.72□□□□□ -1.17
MSH6-209ENST00000538136 MRPS25P82663 173 aaKnown RBP7.72□□□□□ -1.17
MSH6-209ENST00000538136 MBTD1Q05BQ5 628 aa7.72□□□□□ -1.17
MSH6-209ENST00000538136 EFEMP1Q12805 493 aa7.72□□□□□ -1.17
MSH6-209ENST00000538136 MARCH8Q5T0T0 291 aa7.72□□□□□ -1.17
MSH6-209ENST00000538136 DENND2CQ68D51 928 aa7.72□□□□□ -1.17
MSH6-209ENST00000538136 ADSSL1Q8N142 457 aa7.72□□□□□ -1.17
MSH6-209ENST00000538136 FTHL17Q9BXU8 183 aa7.72□□□□□ -1.17
MSH6-209ENST00000538136 INTS2Q9H0H0 1204 aaKnown RBP7.72□□□□□ -1.17
MSH6-209ENST00000538136 IFT122Q9HBG6 1241 aa7.72□□□□□ -1.17
MSH6-209ENST00000538136 FAM8A1Q9UBU6 413 aa7.72□□□□□ -1.17
MSH6-209ENST00000538136 PAXBP1Q9Y5B6 917 aa7.72□□□□□ -1.17
MSH6-209ENST00000538136 FHOD1Q9Y613 1164 aa7.72□□□□□ -1.17
MSH6-209ENST00000538136 ZBTB24O43167 697 aaPredicted RBP7.71□□□□□ -1.17
MSH6-209ENST00000538136 HOXA2O43364 376 aa7.71□□□□□ -1.17
MSH6-209ENST00000538136 MAGEA1P43355 309 aa7.71□□□□□ -1.17
MSH6-209ENST00000538136 TNNT3P45378 269 aaPredicted RBP7.71□□□□□ -1.17
MSH6-209ENST00000538136 WDR5P61964 334 aaKnown RBP7.71□□□□□ -1.17
MSH6-209ENST00000538136 SLC10A6Q3KNW5 377 aa7.71□□□□□ -1.17
MSH6-209ENST00000538136 ZNF280DQ6N043 979 aa7.71□□□□□ -1.17
MSH6-209ENST00000538136 FUT10Q6P4F1 479 aa7.71□□□□□ -1.17
MSH6-209ENST00000538136 PRR23CQ6ZRP0 262 aa7.71□□□□□ -1.17
MSH6-209ENST00000538136 NPAS4Q8IUM7 802 aa7.71□□□□□ -1.17
MSH6-209ENST00000538136 ARMC5Q96C12 935 aa7.71□□□□□ -1.17
MSH6-209ENST00000538136 MRRFQ96E11 262 aaKnown RBP7.71□□□□□ -1.17
MSH6-209ENST00000538136 GPR62Q9BZJ7 368 aa7.71□□□□□ -1.17
MSH6-209ENST00000538136 CIPCQ9C0C6 399 aa7.71□□□□□ -1.17
MSH6-209ENST00000538136 LUC7LQ9NQ29 371 aaKnown RBP7.71□□□□□ -1.17
MSH6-209ENST00000538136 RASAL2Q9UJF2 1139 aa7.71□□□□□ -1.17
MSH6-209ENST00000538136 MOSPD1Q9UJG1 213 aa7.71□□□□□ -1.17
MSH6-209ENST00000538136 ADGRA2Q96PE1 1338 aa7.71□□□□□ -1.18
MSH6-209ENST00000538136 GRM6O15303 877 aa7.71□□□□□ -1.18
MSH6-209ENST00000538136 KIF4AO95239 1232 aa7.71□□□□□ -1.18
MSH6-209ENST00000538136 FMO5P49326 533 aa7.71□□□□□ -1.18
MSH6-209ENST00000538136 TARBP2Q15633 366 aaKnown RBP7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms