RNA–Protein interactions for RNA: ENST00000537925.5

SNHG1-206, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 1 (best) BASIC

Gene SNHG1, Length 1,487 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-206ENST00000537925 ACOT2P49753 483 aa12.43□□□□□ -0.42
SNHG1-206ENST00000537925 SNRPFP62306 86 aaKnown RBP12.43□□□□□ -0.42
SNHG1-206ENST00000537925 PPP2R3AQ06190 1150 aa12.43□□□□□ -0.42
SNHG1-206ENST00000537925 CCDC85BQ15834 202 aaPredicted RBP12.43□□□□□ -0.42
SNHG1-206ENST00000537925 PDE12Q6L8Q7 609 aaKnown RBP12.43□□□□□ -0.42
SNHG1-206ENST00000537925 FOXR2Q6PJQ5 311 aa12.43□□□□□ -0.42
SNHG1-206ENST00000537925 CYP26C1Q6V0L0 522 aa12.43□□□□□ -0.42
SNHG1-206ENST00000537925 RAD9BQ6WBX8 426 aa12.43□□□□□ -0.42
SNHG1-206ENST00000537925 NELFCDQ8IXH7 590 aa12.43□□□□□ -0.42
SNHG1-206ENST00000537925 SMYD4Q8IYR2 804 aaPredicted RBP12.43□□□□□ -0.42
SNHG1-206ENST00000537925 RNF168Q8IYW5 571 aaPredicted RBP12.43□□□□□ -0.42
SNHG1-206ENST00000537925 MICALL1Q8N3F8 863 aa12.43□□□□□ -0.42
SNHG1-206ENST00000537925 WDR24Q96S15 920 aa12.43□□□□□ -0.42
SNHG1-206ENST00000537925 TSPAN18Q96SJ8 248 aa12.43□□□□□ -0.42
SNHG1-206ENST00000537925 ARID3AQ99856 593 aa12.43□□□□□ -0.42
SNHG1-206ENST00000537925 CBWD1Q9BRT8 395 aa12.43□□□□□ -0.42
SNHG1-206ENST00000537925 COLEC11Q9BWP8 271 aa12.43□□□□□ -0.42
SNHG1-206ENST00000537925 CARD6Q9BX69 1037 aa12.43□□□□□ -0.42
SNHG1-206ENST00000537925 NSUN3Q9H649 340 aaKnown RBP12.43□□□□□ -0.42
SNHG1-206ENST00000537925 RPF1Q9H9Y2 349 aaKnown RBP12.43□□□□□ -0.42
SNHG1-206ENST00000537925 ABHD10Q9NUJ1 306 aa12.43□□□□□ -0.42
SNHG1-206ENST00000537925 ZNF446Q9NWS9 450 aa12.43□□□□□ -0.42
SNHG1-206ENST00000537925 CACNG4Q9UBN1 327 aa12.43□□□□□ -0.42
SNHG1-206ENST00000537925 STK39Q9UEW8 545 aa12.43□□□□□ -0.42
SNHG1-206ENST00000537925 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.43□□□□□ -0.42
SNHG1-206ENST00000537925 V9GYY5 206 aaPredicted RBP12.43□□□□□ -0.42
SNHG1-206ENST00000537925 BICDL2A1A5D9 508 aa12.42□□□□□ -0.42
SNHG1-206ENST00000537925 CASTOR2A6NHX0 329 aa12.42□□□□□ -0.42
SNHG1-206ENST00000537925 SOWAHDA6NJG2 315 aa12.42□□□□□ -0.42
SNHG1-206ENST00000537925 LACTBL1A8MY62 500 aa12.42□□□□□ -0.42
SNHG1-206ENST00000537925 KIAA0391O15091 583 aaKnown RBP12.42□□□□□ -0.42
SNHG1-206ENST00000537925 HOXD11P31277 338 aaPredicted RBP12.42□□□□□ -0.42
SNHG1-206ENST00000537925 CASP14P31944 242 aa12.42□□□□□ -0.42
SNHG1-206ENST00000537925 PRCPP42785 496 aa12.42□□□□□ -0.42
SNHG1-206ENST00000537925 SOX4Q06945 474 aaPredicted RBP12.42□□□□□ -0.42
SNHG1-206ENST00000537925 ZBTB6Q15916 424 aa12.42□□□□□ -0.42
SNHG1-206ENST00000537925 KNOP1Q1ED39 458 aaKnown RBP12.42□□□□□ -0.42
SNHG1-206ENST00000537925 TMCO3Q6UWJ1 677 aa12.42□□□□□ -0.42
SNHG1-206ENST00000537925 CD302Q8IX05 232 aa12.42□□□□□ -0.42
SNHG1-206ENST00000537925 CEP112Q8N8E3 955 aa12.42□□□□□ -0.42
SNHG1-206ENST00000537925 LRRN4CLQ8ND94 238 aa12.42□□□□□ -0.42
SNHG1-206ENST00000537925 ZSWIM2Q8NEG5 633 aa12.42□□□□□ -0.42
SNHG1-206ENST00000537925 PPM1EQ8WY54 764 aa12.42□□□□□ -0.42
SNHG1-206ENST00000537925 GOLGA1Q92805 767 aa12.42□□□□□ -0.42
SNHG1-206ENST00000537925 SAAL1Q96ER3 474 aa12.42□□□□□ -0.42
SNHG1-206ENST00000537925 UROC1Q96N76 676 aa12.42□□□□□ -0.42
SNHG1-206ENST00000537925 ZBP1Q9H171 429 aa12.42□□□□□ -0.42
SNHG1-206ENST00000537925 GOLGA2P5Q9HBQ8 144 aa12.42□□□□□ -0.42
SNHG1-206ENST00000537925 NGRNQ9NPE2 291 aaKnown RBP12.42□□□□□ -0.42
SNHG1-206ENST00000537925 AGPAT3Q9NRZ7 376 aa12.42□□□□□ -0.42
SNHG1-206ENST00000537925 SLC38A7Q9NVC3 462 aa12.42□□□□□ -0.42
SNHG1-206ENST00000537925 RAPGEFL1Q9UHV5 662 aa12.42□□□□□ -0.42
SNHG1-206ENST00000537925 PRDM4Q9UKN5 801 aa12.42□□□□□ -0.42
SNHG1-206ENST00000537925 TMEM189-UBE2V1I3L0A0 370 aa12.41□□□□□ -0.42
SNHG1-206ENST00000537925 EXTL3O43909 919 aa12.41□□□□□ -0.42
SNHG1-206ENST00000537925 KIF4AO95239 1232 aa12.41□□□□□ -0.42
SNHG1-206ENST00000537925 TUBBP07437 444 aa12.41□□□□□ -0.42
SNHG1-206ENST00000537925 CTSAP10619 480 aa12.41□□□□□ -0.42
SNHG1-206ENST00000537925 CLCNKBP51801 687 aa12.41□□□□□ -0.42
SNHG1-206ENST00000537925 UPP1Q16831 310 aa12.41□□□□□ -0.42
SNHG1-206ENST00000537925 TCEAL5Q5H9L2 206 aa12.41□□□□□ -0.42
SNHG1-206ENST00000537925 TMC7Q7Z402 723 aa12.41□□□□□ -0.42
SNHG1-206ENST00000537925 FAM114A1Q8IWE2 563 aa12.41□□□□□ -0.42
SNHG1-206ENST00000537925 C12orf56Q8IXR9 622 aa12.41□□□□□ -0.42
SNHG1-206ENST00000537925 VPS52Q8N1B4 723 aa12.41□□□□□ -0.42
SNHG1-206ENST00000537925 GPD1LQ8N335 351 aa12.41□□□□□ -0.42
SNHG1-206ENST00000537925 TMEM174Q8WUU8 243 aa12.41□□□□□ -0.42
SNHG1-206ENST00000537925 C18orf25Q96B23 403 aaPredicted RBP12.41□□□□□ -0.42
SNHG1-206ENST00000537925 TCF25Q9BQ70 676 aa12.41□□□□□ -0.42
SNHG1-206ENST00000537925 FAM213AQ9BRX8 229 aa12.41□□□□□ -0.42
SNHG1-206ENST00000537925 NUP58Q9BVL2 599 aa12.41□□□□□ -0.42
SNHG1-206ENST00000537925 KCTD10Q9H3F6 313 aa12.41□□□□□ -0.42
SNHG1-206ENST00000537925 PCIF1Q9H4Z3 704 aa12.41□□□□□ -0.42
SNHG1-206ENST00000537925 ASB7Q9H672 318 aa12.41□□□□□ -0.42
SNHG1-206ENST00000537925 HSPBP1Q9NZL4 362 aa12.41□□□□□ -0.42
SNHG1-206ENST00000537925 ADAM28Q9UKQ2 775 aa12.41□□□□□ -0.42
SNHG1-206ENST00000537925 PCDHGC5Q9Y5F6 944 aa12.41□□□□□ -0.42
SNHG1-206ENST00000537925 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.41□□□□□ -0.42
SNHG1-206ENST00000537925 CSPG5O95196 566 aa12.4□□□□□ -0.42
SNHG1-206ENST00000537925 SOD2P04179 222 aa12.4□□□□□ -0.42
SNHG1-206ENST00000537925 CYP3A5P20815 502 aa12.4□□□□□ -0.42
SNHG1-206ENST00000537925 RPL9P32969 192 aaKnown RBP12.4□□□□□ -0.42
SNHG1-206ENST00000537925 SMC1AQ14683 1233 aaKnown RBP12.4□□□□□ -0.42
SNHG1-206ENST00000537925 MTF1Q14872 753 aa12.4□□□□□ -0.42
SNHG1-206ENST00000537925 COL19A1Q14993 1142 aa12.4□□□□□ -0.42
SNHG1-206ENST00000537925 PTPN21Q16825 1174 aa12.4□□□□□ -0.42
SNHG1-206ENST00000537925 FIGNQ5HY92 759 aa12.4□□□□□ -0.42
SNHG1-206ENST00000537925 PLPP4Q5VZY2 271 aa12.4□□□□□ -0.42
SNHG1-206ENST00000537925 TTI2Q6NXR4 508 aa12.4□□□□□ -0.42
SNHG1-206ENST00000537925 FUT10Q6P4F1 479 aa12.4□□□□□ -0.42
SNHG1-206ENST00000537925 DCLRE1AQ6PJP8 1040 aa12.4□□□□□ -0.42
SNHG1-206ENST00000537925 CD300LGQ6UXG3 332 aa12.4□□□□□ -0.42
SNHG1-206ENST00000537925 HS2ST1Q7LGA3 356 aa12.4□□□□□ -0.42
SNHG1-206ENST00000537925 ADGRD2Q7Z7M1 963 aa12.4□□□□□ -0.42
SNHG1-206ENST00000537925 IRF2BP1Q8IU81 584 aa12.4□□□□□ -0.42
SNHG1-206ENST00000537925 BRSK2Q8IWQ3 736 aa12.4□□□□□ -0.42
SNHG1-206ENST00000537925 GUF1Q8N442 669 aaKnown RBP12.4□□□□□ -0.42
SNHG1-206ENST00000537925 MRPL43Q8N983 215 aaKnown RBP12.4□□□□□ -0.42
SNHG1-206ENST00000537925 MICAL1Q8TDZ2 1067 aa12.4□□□□□ -0.42
SNHG1-206ENST00000537925 KIF12Q96FN5 646 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms