RNA–Protein interactions for RNA: ENST00000535717.1

CHD4-203, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 660 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-203ENST00000535717 GCLMP48507 274 aa13□□□□□ -0.33
CHD4-203ENST00000535717 TAF6P49848 677 aa13□□□□□ -0.33
CHD4-203ENST00000535717 BMS1Q14692 1282 aaKnown RBP13□□□□□ -0.33
CHD4-203ENST00000535717 CCDC85BQ15834 202 aaPredicted RBP13□□□□□ -0.33
CHD4-203ENST00000535717 ZACNQ401N2 412 aa13□□□□□ -0.33
CHD4-203ENST00000535717 CCDC40Q4G0X9 1142 aa13□□□□□ -0.33
CHD4-203ENST00000535717 TCEAL5Q5H9L2 206 aa13□□□□□ -0.33
CHD4-203ENST00000535717 KIAA1841Q6NSI8 718 aa13□□□□□ -0.33
CHD4-203ENST00000535717 PDZRN4Q6ZMN7 1036 aaPredicted RBP13□□□□□ -0.33
CHD4-203ENST00000535717 C15orf39Q6ZRI6 1047 aa13□□□□□ -0.33
CHD4-203ENST00000535717 SV2AQ7L0J3 742 aa13□□□□□ -0.33
CHD4-203ENST00000535717 FRMD5Q7Z6J6 570 aa13□□□□□ -0.33
CHD4-203ENST00000535717 CEP57Q86XR8 500 aa13□□□□□ -0.33
CHD4-203ENST00000535717 IRF2BP1Q8IU81 584 aa13□□□□□ -0.33
CHD4-203ENST00000535717 LRRC52Q8N7C0 313 aa13□□□□□ -0.33
CHD4-203ENST00000535717 RIN2Q8WYP3 895 aaPredicted RBP13□□□□□ -0.33
CHD4-203ENST00000535717 SENP8Q96LD8 212 aa13□□□□□ -0.33
CHD4-203ENST00000535717 METTL14Q9HCE5 456 aaKnown RBP13□□□□□ -0.33
CHD4-203ENST00000535717 MRPL17Q9NRX2 175 aaKnown RBP13□□□□□ -0.33
CHD4-203ENST00000535717 STXBP5LQ9Y2K9 1186 aa13□□□□□ -0.33
CHD4-203ENST00000535717 KPNA7A9QM74 516 aa12.99□□□□□ -0.33
CHD4-203ENST00000535717 SYN3O14994 580 aa12.99□□□□□ -0.33
CHD4-203ENST00000535717 PHACTR2O75167 634 aa12.99□□□□□ -0.33
CHD4-203ENST00000535717 VNN1O95497 513 aa12.99□□□□□ -0.33
CHD4-203ENST00000535717 FGFR1OPO95684 399 aaKnown RBP12.99□□□□□ -0.33
CHD4-203ENST00000535717 GNA14O95837 355 aa12.99□□□□□ -0.33
CHD4-203ENST00000535717 PNPLA4P41247 253 aa12.99□□□□□ -0.33
CHD4-203ENST00000535717 NRIP1P48552 1158 aa12.99□□□□□ -0.33
CHD4-203ENST00000535717 HYAL1Q12794 435 aa12.99□□□□□ -0.33
CHD4-203ENST00000535717 BIRC3Q13489 604 aa12.99□□□□□ -0.33
CHD4-203ENST00000535717 ZSCAN23Q3MJ62 389 aa12.99□□□□□ -0.33
CHD4-203ENST00000535717 SV2CQ496J9 727 aa12.99□□□□□ -0.33
CHD4-203ENST00000535717 DCAF17Q5H9S7 520 aaPredicted RBP12.99□□□□□ -0.33
CHD4-203ENST00000535717 PRSS55Q6UWB4 352 aaPredicted RBP12.99□□□□□ -0.33
CHD4-203ENST00000535717 DSTYKQ6XUX3 929 aa12.99□□□□□ -0.33
CHD4-203ENST00000535717 RBM23Q86U06 439 aaKnown RBP12.99□□□□□ -0.33
CHD4-203ENST00000535717 GPR65Q8IYL9 337 aa12.99□□□□□ -0.33
CHD4-203ENST00000535717 LNX1Q8TBB1 728 aaPredicted RBP12.99□□□□□ -0.33
CHD4-203ENST00000535717 PIK3R5Q8WYR1 880 aa12.99□□□□□ -0.33
CHD4-203ENST00000535717 SLC35C1Q96A29 364 aa12.99□□□□□ -0.33
CHD4-203ENST00000535717 HPDLQ96IR7 371 aa12.99□□□□□ -0.33
CHD4-203ENST00000535717 ZNF560Q96MR9 790 aa12.99□□□□□ -0.33
CHD4-203ENST00000535717 FUCA2Q9BTY2 467 aa12.99□□□□□ -0.33
CHD4-203ENST00000535717 DNAJC25Q9H1X3 360 aa12.99□□□□□ -0.33
CHD4-203ENST00000535717 TLE6Q9H808 572 aa12.99□□□□□ -0.33
CHD4-203ENST00000535717 PCDHB8Q9UN66 801 aa12.99□□□□□ -0.33
CHD4-203ENST00000535717 SSX2IPQ9Y2D8 614 aa12.99□□□□□ -0.33
CHD4-203ENST00000535717 TIMM13Q9Y5L4 95 aaPredicted RBP12.99□□□□□ -0.33
CHD4-203ENST00000535717 CYB561D2O14569 222 aa12.98□□□□□ -0.33
CHD4-203ENST00000535717 PER2O15055 1255 aa12.98□□□□□ -0.33
CHD4-203ENST00000535717 STX10O60499 249 aa12.98□□□□□ -0.33
CHD4-203ENST00000535717 CNPP09543 421 aaKnown RBP12.98□□□□□ -0.33
CHD4-203ENST00000535717 CCDC192P0DO97 292 aa12.98□□□□□ -0.33
CHD4-203ENST00000535717 RPL17P18621 184 aaKnown RBP12.98□□□□□ -0.33
CHD4-203ENST00000535717 GTF2H1P32780 548 aa12.98□□□□□ -0.33
CHD4-203ENST00000535717 GTF2F1P35269 517 aaKnown RBP eCLIP12.98□□□□□ -0.33
CHD4-203ENST00000535717 MARSP56192 900 aaKnown RBP12.98□□□□□ -0.33
CHD4-203ENST00000535717 MYL6P60660 151 aa12.98□□□□□ -0.33
CHD4-203ENST00000535717 MYO1EQ12965 1108 aa12.98□□□□□ -0.33
CHD4-203ENST00000535717 TRPC3Q13507 836 aa12.98□□□□□ -0.33
CHD4-203ENST00000535717 NCOA4Q13772 614 aa12.98□□□□□ -0.33
CHD4-203ENST00000535717 MRPL58Q14197 206 aaKnown RBP12.98□□□□□ -0.33
CHD4-203ENST00000535717 DUSP6Q16828 381 aa12.98□□□□□ -0.33
CHD4-203ENST00000535717 TPD52L1Q16890 204 aaPredicted RBP12.98□□□□□ -0.33
CHD4-203ENST00000535717 ANO6Q4KMQ2 910 aa12.98□□□□□ -0.33
CHD4-203ENST00000535717 VARS2Q5ST30 1063 aaKnown RBP12.98□□□□□ -0.33
CHD4-203ENST00000535717 TCERG1LQ5VWI1 586 aa12.98□□□□□ -0.33
CHD4-203ENST00000535717 TRIM59Q8IWR1 403 aa12.98□□□□□ -0.33
CHD4-203ENST00000535717 APPL2Q8NEU8 664 aa12.98□□□□□ -0.33
CHD4-203ENST00000535717 ENOX1Q8TC92 643 aaKnown RBP12.98□□□□□ -0.33
CHD4-203ENST00000535717 PPM1EQ8WY54 764 aa12.98□□□□□ -0.33
CHD4-203ENST00000535717 CNOT6LQ96LI5 555 aaKnown RBP12.98□□□□□ -0.33
CHD4-203ENST00000535717 KLHL5Q96PQ7 755 aa12.98□□□□□ -0.33
CHD4-203ENST00000535717 XYLT2Q9H1B5 865 aa12.98□□□□□ -0.33
CHD4-203ENST00000535717 THAP9Q9H5L6 903 aa12.98□□□□□ -0.33
CHD4-203ENST00000535717 MMRN2Q9H8L6 949 aa12.98□□□□□ -0.33
CHD4-203ENST00000535717 RXFP1Q9HBX9 757 aa12.98□□□□□ -0.33
CHD4-203ENST00000535717 TMEM8AQ9HCN3 771 aa12.98□□□□□ -0.33
CHD4-203ENST00000535717 GDAP2Q9NXN4 497 aa12.98□□□□□ -0.33
CHD4-203ENST00000535717 R3HCC1Q9Y3T6 440 aaKnown RBP12.98□□□□□ -0.33
CHD4-203ENST00000535717 TEX28O15482 410 aa12.97□□□□□ -0.33
CHD4-203ENST00000535717 CLASP2O75122 1294 aaKnown RBP12.97□□□□□ -0.33
CHD4-203ENST00000535717 STAU1O95793 577 aaKnown RBP12.97□□□□□ -0.33
CHD4-203ENST00000535717 HLA-DRAP01903 254 aa12.97□□□□□ -0.33
CHD4-203ENST00000535717 CYP11A1P05108 521 aa12.97□□□□□ -0.33
CHD4-203ENST00000535717 ODC1P11926 461 aa12.97□□□□□ -0.33
CHD4-203ENST00000535717 PSMD5Q16401 504 aa12.97□□□□□ -0.33
CHD4-203ENST00000535717 CBWD6Q4V339 395 aa12.97□□□□□ -0.33
CHD4-203ENST00000535717 CBWD3Q5JTY5 395 aa12.97□□□□□ -0.33
CHD4-203ENST00000535717 CBWD5Q5RIA9 395 aa12.97□□□□□ -0.33
CHD4-203ENST00000535717 KRT39Q6A163 491 aa12.97□□□□□ -0.33
CHD4-203ENST00000535717 PDXDC1Q6P996 788 aa12.97□□□□□ -0.33
CHD4-203ENST00000535717 RSPO2Q6UXX9 243 aaPredicted RBP12.97□□□□□ -0.33
CHD4-203ENST00000535717 ANKS3Q6ZW76 656 aa12.97□□□□□ -0.33
CHD4-203ENST00000535717 MAFAQ8NHW3 353 aaPredicted RBP12.97□□□□□ -0.33
CHD4-203ENST00000535717 TAS1R2Q8TE23 839 aa12.97□□□□□ -0.33
CHD4-203ENST00000535717 PPP2R3CQ969Q6 453 aa12.97□□□□□ -0.33
CHD4-203ENST00000535717 ELMO3Q96BJ8 720 aa12.97□□□□□ -0.33
CHD4-203ENST00000535717 CLSTN3Q9BQT9 956 aa12.97□□□□□ -0.33
CHD4-203ENST00000535717 EMILIN2Q9BXX0 1053 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms