RNA–Protein interactions for RNA: ENST00000533464.5

PHRF1-205, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-205ENST00000533464 HPDLQ96IR7 371 aa18.47■□□□□ 0.55
PHRF1-205ENST00000533464 ECT2Q9H8V3 914 aa18.47■□□□□ 0.55
PHRF1-205ENST00000533464 XPO7Q9UIA9 1087 aaKnown RBP18.47■□□□□ 0.55
PHRF1-205ENST00000533464 CYTH3O43739 400 aa18.46■□□□□ 0.55
PHRF1-205ENST00000533464 C2CD6Q53TS8 623 aa18.46■□□□□ 0.55
PHRF1-205ENST00000533464 CYP4A22Q5TCH4 519 aa18.46■□□□□ 0.55
PHRF1-205ENST00000533464 ZNF473Q8WTR7 871 aaKnown RBP18.46■□□□□ 0.55
PHRF1-205ENST00000533464 ALKBH8Q96BT7 664 aaKnown RBP18.46■□□□□ 0.55
PHRF1-205ENST00000533464 MED15Q96RN5 788 aa18.46■□□□□ 0.55
PHRF1-205ENST00000533464 TRIM62Q9BVG3 475 aa18.46■□□□□ 0.55
PHRF1-205ENST00000533464 ZKSCAN7Q9P0L1 754 aaPredicted RBP18.46■□□□□ 0.55
PHRF1-205ENST00000533464 SMIM22K7EJ46 135 aa18.46■□□□□ 0.55
PHRF1-205ENST00000533464 COILP38432 576 aaPredicted RBP18.46■□□□□ 0.55
PHRF1-205ENST00000533464 SH3BGRP55822 239 aaPredicted RBP18.46■□□□□ 0.55
PHRF1-205ENST00000533464 ZBED2Q9BTP6 218 aa18.46■□□□□ 0.55
PHRF1-205ENST00000533464 SMG5Q9UPR3 1016 aaKnown RBP18.46■□□□□ 0.55
PHRF1-205ENST00000533464 NLRP11P59045 1033 aaKnown RBP18.46■□□□□ 0.55
PHRF1-205ENST00000533464 CXCL9Q07325 125 aa18.46■□□□□ 0.55
PHRF1-205ENST00000533464 RNF135Q8IUD6 432 aa18.46■□□□□ 0.55
PHRF1-205ENST00000533464 NDUFAF2Q8N183 169 aa18.46■□□□□ 0.55
PHRF1-205ENST00000533464 PARK7Q99497 189 aaKnown RBP18.46■□□□□ 0.55
PHRF1-205ENST00000533464 ZSWIM1Q9BR11 485 aa18.46■□□□□ 0.55
PHRF1-205ENST00000533464 MAP3K20Q9NYL2 800 aaKnown RBP18.46■□□□□ 0.55
PHRF1-205ENST00000533464 MEFVO15553 781 aaPredicted RBP18.46■□□□□ 0.55
PHRF1-205ENST00000533464 SLC29A2Q14542 456 aa18.46■□□□□ 0.55
PHRF1-205ENST00000533464 C1orf146Q5VVC0 180 aa18.46■□□□□ 0.55
PHRF1-205ENST00000533464 PAPD7Q5XG87 772 aaKnown RBP18.46■□□□□ 0.55
PHRF1-205ENST00000533464 KRT80Q6KB66 452 aa18.46■□□□□ 0.55
PHRF1-205ENST00000533464 PNMA5Q96PV4 448 aa18.46■□□□□ 0.55
PHRF1-205ENST00000533464 CCL15-CCL14A0A0B4J2E2 113 aa18.46■□□□□ 0.54
PHRF1-205ENST00000533464 VCAM1P19320 739 aa18.46■□□□□ 0.54
PHRF1-205ENST00000533464 CCL15Q16663 113 aa18.46■□□□□ 0.54
PHRF1-205ENST00000533464 TMCO4Q5TGY1 634 aa18.46■□□□□ 0.54
PHRF1-205ENST00000533464 KDELC2Q7Z4H8 507 aa18.46■□□□□ 0.54
PHRF1-205ENST00000533464 ZNF710Q8N1W2 664 aa18.46■□□□□ 0.54
PHRF1-205ENST00000533464 CD4P01730 458 aa18.45■□□□□ 0.54
PHRF1-205ENST00000533464 LSP1P33241 339 aa18.45■□□□□ 0.54
PHRF1-205ENST00000533464 MAGEA4P43358 317 aa18.45■□□□□ 0.54
PHRF1-205ENST00000533464 RECQLP46063 649 aaPredicted RBP18.45■□□□□ 0.54
PHRF1-205ENST00000533464 DEFB132Q7Z7B7 95 aa18.45■□□□□ 0.54
PHRF1-205ENST00000533464 PRPF31Q8WWY3 499 aaKnown RBP18.45■□□□□ 0.54
PHRF1-205ENST00000533464 POP1Q99575 1024 aaKnown RBP18.45■□□□□ 0.54
PHRF1-205ENST00000533464 NUDT12Q9BQG2 462 aa18.45■□□□□ 0.54
PHRF1-205ENST00000533464 SNX2O60749 519 aa18.45■□□□□ 0.54
PHRF1-205ENST00000533464 LMNAP02545 664 aaKnown RBP18.45■□□□□ 0.54
PHRF1-205ENST00000533464 ITGB3P05106 788 aa18.45■□□□□ 0.54
PHRF1-205ENST00000533464 GRIK1P39086 918 aa18.45■□□□□ 0.54
PHRF1-205ENST00000533464 AGBL2Q5U5Z8 902 aa18.45■□□□□ 0.54
PHRF1-205ENST00000533464 SYTL5Q8TDW5 730 aaPredicted RBP18.45■□□□□ 0.54
PHRF1-205ENST00000533464 XPO6Q96QU8 1125 aaKnown RBP18.45■□□□□ 0.54
PHRF1-205ENST00000533464 PDCD2LQ9BRP1 358 aa18.45■□□□□ 0.54
PHRF1-205ENST00000533464 RSAD1Q9HA92 442 aa18.45■□□□□ 0.54
PHRF1-205ENST00000533464 SARS2Q9NP81 518 aaKnown RBP18.45■□□□□ 0.54
PHRF1-205ENST00000533464 CHMP2BQ9UQN3 213 aa18.45■□□□□ 0.54
PHRF1-205ENST00000533464 LAMC2Q13753 1193 aa18.45■□□□□ 0.54
PHRF1-205ENST00000533464 FRA10AC1Q70Z53 315 aa18.45■□□□□ 0.54
PHRF1-205ENST00000533464 ZNF571Q7Z3V5 609 aaPredicted RBP18.45■□□□□ 0.54
PHRF1-205ENST00000533464 FAM163AQ96GL9 167 aaPredicted RBP18.45■□□□□ 0.54
PHRF1-205ENST00000533464 OGTO15294 1046 aa18.45■□□□□ 0.54
PHRF1-205ENST00000533464 ACTN3Q08043 901 aaPredicted RBP18.45■□□□□ 0.54
PHRF1-205ENST00000533464 FASTKD1Q53R41 847 aaKnown RBP18.45■□□□□ 0.54
PHRF1-205ENST00000533464 PIP4K2CQ8TBX8 421 aa18.45■□□□□ 0.54
PHRF1-205ENST00000533464 TRIM33Q9UPN9 1127 aa18.45■□□□□ 0.54
PHRF1-205ENST00000533464 ARL2BPQ9Y2Y0 163 aa18.45■□□□□ 0.54
PHRF1-205ENST00000533464 PRLRP16471 622 aa18.44■□□□□ 0.54
PHRF1-205ENST00000533464 IRAK1P51617 712 aa18.44■□□□□ 0.54
PHRF1-205ENST00000533464 FUT8Q9BYC5 575 aa18.44■□□□□ 0.54
PHRF1-205ENST00000533464 FOXP3Q9BZS1 431 aa18.44■□□□□ 0.54
PHRF1-205ENST00000533464 HSPA8P11142 646 aaKnown RBP18.44■□□□□ 0.54
PHRF1-205ENST00000533464 CYP11B1P15538 503 aa18.44■□□□□ 0.54
PHRF1-205ENST00000533464 SPATA2LQ8IUW3 424 aaPredicted RBP18.44■□□□□ 0.54
PHRF1-205ENST00000533464 AGR3Q8TD06 166 aa18.44■□□□□ 0.54
PHRF1-205ENST00000533464 CASKIN2Q8WXE0 1202 aa18.44■□□□□ 0.54
PHRF1-205ENST00000533464 N4BP2L2Q92802 583 aaPredicted RBP18.44■□□□□ 0.54
PHRF1-205ENST00000533464 ACSF2Q96CM8 615 aaPredicted RBP18.44■□□□□ 0.54
PHRF1-205ENST00000533464 OLFML3Q9NRN5 406 aa18.44■□□□□ 0.54
PHRF1-205ENST00000533464 PSMC3IPQ9P2W1 217 aaPredicted RBP18.44■□□□□ 0.54
PHRF1-205ENST00000533464 SUPT20HL2P0C7V6 817 aa18.44■□□□□ 0.54
PHRF1-205ENST00000533464 HOXD10P28358 340 aa18.44■□□□□ 0.54
PHRF1-205ENST00000533464 SEC24CP53992 1094 aa18.44■□□□□ 0.54
PHRF1-205ENST00000533464 C3orf62Q6ZUJ4 267 aa18.44■□□□□ 0.54
PHRF1-205ENST00000533464 TAS1R2Q8TE23 839 aa18.44■□□□□ 0.54
PHRF1-205ENST00000533464 KATNAL1Q9BW62 490 aa18.44■□□□□ 0.54
PHRF1-205ENST00000533464 METTL5Q9NRN9 209 aaKnown RBP18.44■□□□□ 0.54
PHRF1-205ENST00000533464 STOML1Q9UBI4 398 aa18.44■□□□□ 0.54
PHRF1-205ENST00000533464 FAM86B1E9PN63 330 aa18.44■□□□□ 0.54
PHRF1-205ENST00000533464 FAM86B2P0C5J1 330 aa18.44■□□□□ 0.54
PHRF1-205ENST00000533464 CENPCQ03188 943 aa18.44■□□□□ 0.54
PHRF1-205ENST00000533464 MAPK7Q13164 816 aa18.44■□□□□ 0.54
PHRF1-205ENST00000533464 MORF4L2Q15014 288 aa18.44■□□□□ 0.54
PHRF1-205ENST00000533464 NBPF12Q5TAG4 269 aaPredicted RBP18.44■□□□□ 0.54
PHRF1-205ENST00000533464 WDR93Q6P2C0 686 aa18.44■□□□□ 0.54
PHRF1-205ENST00000533464 CLMNQ96JQ2 1002 aa18.44■□□□□ 0.54
PHRF1-205ENST00000533464 FAM161BQ96MY7 647 aa18.44■□□□□ 0.54
PHRF1-205ENST00000533464 F8VZ95 297 aa18.43■□□□□ 0.54
PHRF1-205ENST00000533464 GPD1P21695 349 aa18.43■□□□□ 0.54
PHRF1-205ENST00000533464 PCNX4Q63HM2 1172 aa18.43■□□□□ 0.54
PHRF1-205ENST00000533464 FAM47DPA6NHR8 397 aa18.43■□□□□ 0.54
PHRF1-205ENST00000533464 GAS2O43903 313 aaKnown RBP18.43■□□□□ 0.54
PHRF1-205ENST00000533464 H2AFXP16104 143 aaPredicted RBP18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms