RNA–Protein interactions for RNA: ENST00000532313.5

CSRP1-215, Transcript of cysteine and glycine rich protein 1, humanhuman

TSL 1 (best)

Gene CSRP1, Length 5,239 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSRP1-215ENST00000532313 ZNF697Q5TEC3 545 aa12.29□□□□□ -0.44
CSRP1-215ENST00000532313 LMBRD2Q68DH5 695 aaPredicted RBP12.29□□□□□ -0.44
CSRP1-215ENST00000532313 DCUN1D1Q96GG9 259 aa12.29□□□□□ -0.44
CSRP1-215ENST00000532313 KCNK9Q9NPC2 374 aa12.29□□□□□ -0.44
CSRP1-215ENST00000532313 NCKAP1Q9Y2A7 1128 aa12.29□□□□□ -0.44
CSRP1-215ENST00000532313 ALS2Q96Q42 1657 aa12.29□□□□□ -0.44
CSRP1-215ENST00000532313 DNM1LO00429 736 aa12.29□□□□□ -0.44
CSRP1-215ENST00000532313 CPB2Q96IY4 423 aa12.29□□□□□ -0.44
CSRP1-215ENST00000532313 ATXN3LQ9H3M9 355 aa12.29□□□□□ -0.44
CSRP1-215ENST00000532313 POLD4Q9HCU8 107 aa12.29□□□□□ -0.44
CSRP1-215ENST00000532313 SNTG2Q9NY99 539 aa12.29□□□□□ -0.44
CSRP1-215ENST00000532313 C4BP0C0L5 1744 aa12.29□□□□□ -0.44
CSRP1-215ENST00000532313 CASTOR2A6NHX0 329 aa12.29□□□□□ -0.44
CSRP1-215ENST00000532313 I3L4J1 428 aa12.29□□□□□ -0.44
CSRP1-215ENST00000532313 AGPAT3Q9NRZ7 376 aa12.29□□□□□ -0.44
CSRP1-215ENST00000532313 BTBD7Q9P203 1132 aa12.29□□□□□ -0.44
CSRP1-215ENST00000532313 ZMYM5Q9UJ78 669 aa12.29□□□□□ -0.44
CSRP1-215ENST00000532313 ZKSCAN5Q9Y2L8 839 aa12.29□□□□□ -0.44
CSRP1-215ENST00000532313 PTCH2Q9Y6C5 1203 aa12.29□□□□□ -0.44
CSRP1-215ENST00000532313 CYP3A7-CYP3A51PA0A087WV96 503 aa12.29□□□□□ -0.44
CSRP1-215ENST00000532313 NPHP3-ACAD11A0A0J9YXS1 232 aa12.29□□□□□ -0.44
CSRP1-215ENST00000532313 A0A1W2PQC6 194 aa12.29□□□□□ -0.44
CSRP1-215ENST00000532313 OR6C75A6NL08 312 aa12.29□□□□□ -0.44
CSRP1-215ENST00000532313 PHF20L1A8MW92 1017 aa12.29□□□□□ -0.44
CSRP1-215ENST00000532313 H0Y626 953 aa12.29□□□□□ -0.44
CSRP1-215ENST00000532313 PODXLO00592 558 aa12.29□□□□□ -0.44
CSRP1-215ENST00000532313 MED24O75448 989 aa12.29□□□□□ -0.44
CSRP1-215ENST00000532313 SLC4A1P02730 911 aa12.29□□□□□ -0.44
CSRP1-215ENST00000532313 RALBP11234 206 aa12.29□□□□□ -0.44
CSRP1-215ENST00000532313 CYP3A7P24462 503 aa12.29□□□□□ -0.44
CSRP1-215ENST00000532313 CACNB2Q08289 660 aaPredicted RBP12.29□□□□□ -0.44
CSRP1-215ENST00000532313 IQCB1Q15051 598 aa12.29□□□□□ -0.44
CSRP1-215ENST00000532313 DCLRE1AQ6PJP8 1040 aa12.29□□□□□ -0.44
CSRP1-215ENST00000532313 VPS52Q8N1B4 723 aa12.29□□□□□ -0.44
CSRP1-215ENST00000532313 SYT15Q9BQS2 421 aa12.29□□□□□ -0.44
CSRP1-215ENST00000532313 MRPS23Q9Y3D9 190 aaKnown RBP12.29□□□□□ -0.44
CSRP1-215ENST00000532313 MYBP10242 640 aa12.28□□□□□ -0.44
CSRP1-215ENST00000532313 EIF4A3P38919 411 aaKnown RBP12.28□□□□□ -0.44
CSRP1-215ENST00000532313 GOLGA7BQ2TAP0 167 aa12.28□□□□□ -0.44
CSRP1-215ENST00000532313 LDLRAD1Q5T700 205 aa12.28□□□□□ -0.44
CSRP1-215ENST00000532313 SDCCAG8Q86SQ7 713 aaPredicted RBP12.28□□□□□ -0.44
CSRP1-215ENST00000532313 ANKLE1Q8NAG6 615 aa12.28□□□□□ -0.44
CSRP1-215ENST00000532313 DHX35Q9H5Z1 703 aaKnown RBP12.28□□□□□ -0.44
CSRP1-215ENST00000532313 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.28□□□□□ -0.447e-12■■■■□ 23.5
CSRP1-215ENST00000532313 RBPJLQ9UBG7 517 aa12.28□□□□□ -0.44
CSRP1-215ENST00000532313 TNFSF13BQ9Y275 285 aa12.28□□□□□ -0.44
CSRP1-215ENST00000532313 ASTN2O75129 1339 aaPredicted RBP12.28□□□□□ -0.44
CSRP1-215ENST00000532313 CFAP99D6REC4 459 aa12.28□□□□□ -0.44
CSRP1-215ENST00000532313 BUB1O43683 1085 aa12.28□□□□□ -0.44
CSRP1-215ENST00000532313 FYB2Q5VWT5 728 aa12.28□□□□□ -0.44
CSRP1-215ENST00000532313 IL31Q6EBC2 164 aa12.28□□□□□ -0.44
CSRP1-215ENST00000532313 SHC4Q6S5L8 630 aa12.28□□□□□ -0.44
CSRP1-215ENST00000532313 TSHZ1Q6ZSZ6 1077 aa12.28□□□□□ -0.44
CSRP1-215ENST00000532313 PASD1Q8IV76 773 aa12.28□□□□□ -0.44
CSRP1-215ENST00000532313 FOPNLQ96NB1 174 aa12.28□□□□□ -0.44
CSRP1-215ENST00000532313 PANX2Q96RD6 677 aa12.28□□□□□ -0.44
CSRP1-215ENST00000532313 AGXT2Q9BYV1 514 aa12.28□□□□□ -0.44
CSRP1-215ENST00000532313 PDE11AQ9HCR9 933 aa12.28□□□□□ -0.44
CSRP1-215ENST00000532313 ST3GAL5Q9UNP4 418 aa12.28□□□□□ -0.44
CSRP1-215ENST00000532313 CSH1P0DML2 217 aa12.28□□□□□ -0.44
CSRP1-215ENST00000532313 CSH2P0DML3 217 aa12.28□□□□□ -0.44
CSRP1-215ENST00000532313 KRT15P19012 456 aa12.28□□□□□ -0.44
CSRP1-215ENST00000532313 BCAR1P56945 870 aa12.28□□□□□ -0.44
CSRP1-215ENST00000532313 NAA35Q5VZE5 725 aa12.28□□□□□ -0.44
CSRP1-215ENST00000532313 HEATR6Q6AI08 1181 aaKnown RBP12.28□□□□□ -0.44
CSRP1-215ENST00000532313 PCGF5Q86SE9 256 aa12.28□□□□□ -0.44
CSRP1-215ENST00000532313 RHOT1Q8IXI2 618 aa12.28□□□□□ -0.44
CSRP1-215ENST00000532313 MAGOHBQ96A72 148 aaKnown RBP12.28□□□□□ -0.44
CSRP1-215ENST00000532313 PEAK1Q9H792 1746 aa12.28□□□□□ -0.44
CSRP1-215ENST00000532313 TMEM63CQ9P1W3 806 aa12.28□□□□□ -0.44
CSRP1-215ENST00000532313 PCDHA2Q9Y5H9 948 aa12.28□□□□□ -0.44
CSRP1-215ENST00000532313 ECEL1O95672 775 aa12.28□□□□□ -0.44
CSRP1-215ENST00000532313 IRF5Q13568 498 aa12.28□□□□□ -0.44
CSRP1-215ENST00000532313 SPDYE1Q8NFV5 336 aaPredicted RBP12.28□□□□□ -0.44
CSRP1-215ENST00000532313 RUSC1Q9BVN2 902 aa12.28□□□□□ -0.44
CSRP1-215ENST00000532313 PLCH1Q4KWH8 1693 aa12.28□□□□□ -0.44
CSRP1-215ENST00000532313 NCK2O43639 380 aa12.27□□□□□ -0.44
CSRP1-215ENST00000532313 PIGHQ14442 188 aaPredicted RBP12.27□□□□□ -0.44
CSRP1-215ENST00000532313 CNKSR3Q6P9H4 555 aa12.27□□□□□ -0.44
CSRP1-215ENST00000532313 SRRM1Q8IYB3 904 aaKnown RBP12.27□□□□□ -0.44
CSRP1-215ENST00000532313 COPS5Q92905 334 aa12.27□□□□□ -0.44
CSRP1-215ENST00000532313 TRIM54Q9BYV2 358 aa12.27□□□□□ -0.44
CSRP1-215ENST00000532313 SAMSN1Q9NSI8 373 aaKnown RBP12.27□□□□□ -0.44
CSRP1-215ENST00000532313 INSL6Q9Y581 213 aa12.27□□□□□ -0.44
CSRP1-215ENST00000532313 SALL3Q9BXA9 1300 aa12.27□□□□□ -0.44
CSRP1-215ENST00000532313 ARHGAP42A6NI28 874 aa12.27□□□□□ -0.44
CSRP1-215ENST00000532313 PGRMC1O00264 195 aaKnown RBP12.27□□□□□ -0.44
CSRP1-215ENST00000532313 CXCL14O95715 111 aa12.27□□□□□ -0.44
CSRP1-215ENST00000532313 TLE2Q04725 743 aa12.27□□□□□ -0.44
CSRP1-215ENST00000532313 GPIHBP1Q8IV16 184 aa12.27□□□□□ -0.44
CSRP1-215ENST00000532313 SMARCD1Q96GM5 515 aa12.27□□□□□ -0.44
CSRP1-215ENST00000532313 SELENOSQ9BQE4 189 aa12.27□□□□□ -0.44
CSRP1-215ENST00000532313 TRIM31Q9BZY9 425 aa12.27□□□□□ -0.44
CSRP1-215ENST00000532313 ZNF518BQ9C0D4 1074 aa12.27□□□□□ -0.44
CSRP1-215ENST00000532313 HMBSP08397 361 aa12.27□□□□□ -0.45
CSRP1-215ENST00000532313 PDGFRAP16234 1089 aa12.27□□□□□ -0.45
CSRP1-215ENST00000532313 CDC25CP30307 473 aa12.27□□□□□ -0.45
CSRP1-215ENST00000532313 GLUD2P49448 558 aa12.27□□□□□ -0.45
CSRP1-215ENST00000532313 YWHAGP61981 247 aaKnown RBP eCLIP12.27□□□□□ -0.45
CSRP1-215ENST00000532313 GRB14Q14449 540 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms