RNA–Protein interactions for RNA: ENST00000532029.6

LRRK1-208, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best) BASIC

Gene LRRK1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-208ENST00000532029 CNOT6LQ96LI5 555 aaKnown RBP24■■□□□ 1.43
LRRK1-208ENST00000532029 NSUN3Q9H649 340 aaKnown RBP24■■□□□ 1.43
LRRK1-208ENST00000532029 TMEM8AQ9HCN3 771 aa24■■□□□ 1.43
LRRK1-208ENST00000532029 CHST7Q9NS84 486 aa24■■□□□ 1.43
LRRK1-208ENST00000532029 MAGEC2Q9UBF1 373 aaPredicted RBP24■■□□□ 1.43
LRRK1-208ENST00000532029 PCDHB8Q9UN66 801 aa24■■□□□ 1.43
LRRK1-208ENST00000532029 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP23.99■■□□□ 1.43
LRRK1-208ENST00000532029 KPNA7A9QM74 516 aa23.99■■□□□ 1.43
LRRK1-208ENST00000532029 C2CD2LO14523 706 aa23.99■■□□□ 1.43
LRRK1-208ENST00000532029 SYN3O14994 580 aa23.99■■□□□ 1.43
LRRK1-208ENST00000532029 FGFR3P22607 806 aa23.99■■□□□ 1.43
LRRK1-208ENST00000532029 MARSP56192 900 aaKnown RBP23.99■■□□□ 1.43
LRRK1-208ENST00000532029 ZACNQ401N2 412 aa23.99■■□□□ 1.43
LRRK1-208ENST00000532029 PDXDC1Q6P996 788 aa23.99■■□□□ 1.43
LRRK1-208ENST00000532029 MICALL1Q8N3F8 863 aa23.99■■□□□ 1.43
LRRK1-208ENST00000532029 APPL2Q8NEU8 664 aa23.99■■□□□ 1.43
LRRK1-208ENST00000532029 AUTS2Q8WXX7 1259 aa23.99■■□□□ 1.43
LRRK1-208ENST00000532029 RIN2Q8WYP3 895 aaPredicted RBP23.99■■□□□ 1.43
LRRK1-208ENST00000532029 HPDLQ96IR7 371 aa23.99■■□□□ 1.43
LRRK1-208ENST00000532029 B3GALT6Q96L58 329 aa23.99■■□□□ 1.43
LRRK1-208ENST00000532029 NFE2L3Q9Y4A8 694 aa23.99■■□□□ 1.43
LRRK1-208ENST00000532029 PCDHGC5Q9Y5F6 944 aa23.99■■□□□ 1.43
LRRK1-208ENST00000532029 M0QZQ0 153 aa23.98■■□□□ 1.43
LRRK1-208ENST00000532029 SPTLC1O15269 473 aa23.98■■□□□ 1.43
LRRK1-208ENST00000532029 CST3P01034 146 aaPredicted RBP23.98■■□□□ 1.43
LRRK1-208ENST00000532029 ODC1P11926 461 aa23.98■■□□□ 1.43
LRRK1-208ENST00000532029 TKTP29401 623 aaKnown RBP23.98■■□□□ 1.43
LRRK1-208ENST00000532029 MXI1P50539 228 aa23.98■■□□□ 1.43
LRRK1-208ENST00000532029 MYL5Q02045 173 aa23.98■■□□□ 1.43
LRRK1-208ENST00000532029 NCOA4Q13772 614 aa23.98■■□□□ 1.43
LRRK1-208ENST00000532029 PTPN14Q15678 1187 aa23.98■■□□□ 1.43
LRRK1-208ENST00000532029 RTP2Q5QGT7 225 aa23.98■■□□□ 1.43
LRRK1-208ENST00000532029 KIAA0319Q5VV43 1072 aa23.98■■□□□ 1.43
LRRK1-208ENST00000532029 KRT39Q6A163 491 aa23.98■■□□□ 1.43
LRRK1-208ENST00000532029 GPR65Q8IYL9 337 aa23.98■■□□□ 1.43
LRRK1-208ENST00000532029 MRPL43Q8N983 215 aaKnown RBP23.98■■□□□ 1.43
LRRK1-208ENST00000532029 SLC35C1Q96A29 364 aa23.98■■□□□ 1.43
LRRK1-208ENST00000532029 SENP8Q96LD8 212 aa23.98■■□□□ 1.43
LRRK1-208ENST00000532029 FUCA2Q9BTY2 467 aa23.98■■□□□ 1.43
LRRK1-208ENST00000532029 C2orf71A6NGG8 1288 aa23.97■■□□□ 1.43
LRRK1-208ENST00000532029 HIDE1A8MVS5 230 aa23.97■■□□□ 1.43
LRRK1-208ENST00000532029 CYB561D2O14569 222 aa23.97■■□□□ 1.43
LRRK1-208ENST00000532029 ATICP31939 592 aa23.97■■□□□ 1.43
LRRK1-208ENST00000532029 PIK3CAP42336 1068 aa23.97■■□□□ 1.43
LRRK1-208ENST00000532029 CREMQ03060 361 aa23.97■■□□□ 1.43
LRRK1-208ENST00000532029 SCARA3Q6AZY7 606 aa23.97■■□□□ 1.43
LRRK1-208ENST00000532029 C15orf39Q6ZRI6 1047 aa23.97■■□□□ 1.43
LRRK1-208ENST00000532029 TRIM59Q8IWR1 403 aa23.97■■□□□ 1.43
LRRK1-208ENST00000532029 PIK3R5Q8WYR1 880 aa23.97■■□□□ 1.43
LRRK1-208ENST00000532029 EMILIN2Q9BXX0 1053 aa23.97■■□□□ 1.43
LRRK1-208ENST00000532029 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP23.97■■□□□ 1.43
LRRK1-208ENST00000532029 UTP18Q9Y5J1 556 aaKnown RBP eCLIP23.97■■□□□ 1.43
LRRK1-208ENST00000532029 IRAK3Q9Y616 596 aa23.97■■□□□ 1.43
LRRK1-208ENST00000532029 VNN1O95497 513 aa23.96■■□□□ 1.43
LRRK1-208ENST00000532029 MTIF2P46199 727 aaKnown RBP23.96■■□□□ 1.43
LRRK1-208ENST00000532029 MYL6P60660 151 aa23.96■■□□□ 1.43
LRRK1-208ENST00000532029 PSMD5Q16401 504 aa23.96■■□□□ 1.43
LRRK1-208ENST00000532029 ANKS3Q6ZW76 656 aa23.96■■□□□ 1.43
LRRK1-208ENST00000532029 IRF2BP1Q8IU81 584 aa23.96■■□□□ 1.43
LRRK1-208ENST00000532029 SAMSN1Q9NSI8 373 aaKnown RBP23.96■■□□□ 1.43
LRRK1-208ENST00000532029 DSEQ9UL01 958 aa23.96■■□□□ 1.43
LRRK1-208ENST00000532029 SNX9Q9Y5X1 595 aa23.96■■□□□ 1.43
LRRK1-208ENST00000532029 H7C4K7 107 aa23.95■■□□□ 1.42
LRRK1-208ENST00000532029 HUS1O60921 280 aa23.95■■□□□ 1.42
LRRK1-208ENST00000532029 N4BP1O75113 896 aaKnown RBP23.95■■□□□ 1.42
LRRK1-208ENST00000532029 STAU1O95793 577 aaKnown RBP23.95■■□□□ 1.42
LRRK1-208ENST00000532029 HLA-DRAP01903 254 aa23.95■■□□□ 1.42
LRRK1-208ENST00000532029 TYMPP19971 482 aa23.95■■□□□ 1.42
LRRK1-208ENST00000532029 ZNF699Q32M78 642 aa23.95■■□□□ 1.42
LRRK1-208ENST00000532029 TCEAL5Q5H9L2 206 aa23.95■■□□□ 1.42
LRRK1-208ENST00000532029 VARS2Q5ST30 1063 aaKnown RBP23.95■■□□□ 1.42
LRRK1-208ENST00000532029 PRSS55Q6UWB4 352 aaPredicted RBP23.95■■□□□ 1.42
LRRK1-208ENST00000532029 METTL23Q86XA0 190 aa23.95■■□□□ 1.42
LRRK1-208ENST00000532029 CCDC150Q8NCX0 1101 aa23.95■■□□□ 1.42
LRRK1-208ENST00000532029 BPIFA3Q9BQP9 254 aa23.95■■□□□ 1.42
LRRK1-208ENST00000532029 IMPG2Q9BZV3 1241 aa23.95■■□□□ 1.42
LRRK1-208ENST00000532029 TLE6Q9H808 572 aa23.95■■□□□ 1.42
LRRK1-208ENST00000532029 GDAP2Q9NXN4 497 aa23.95■■□□□ 1.42
LRRK1-208ENST00000532029 TIMM13Q9Y5L4 95 aaPredicted RBP23.95■■□□□ 1.42
LRRK1-208ENST00000532029 SMTNL1A8MU46 457 aa23.94■■□□□ 1.42
LRRK1-208ENST00000532029 LILRB3O75022 631 aa23.94■■□□□ 1.42
LRRK1-208ENST00000532029 ZNF165P49910 485 aa23.94■■□□□ 1.42
LRRK1-208ENST00000532029 TNNC1P63316 161 aa23.94■■□□□ 1.42
LRRK1-208ENST00000532029 YWHAHQ04917 246 aaPredicted RBP23.94■■□□□ 1.42
LRRK1-208ENST00000532029 SGSM1Q2NKQ1 1148 aa23.94■■□□□ 1.42
LRRK1-208ENST00000532029 HSP90AA4PQ58FG1 418 aa23.94■■□□□ 1.42
LRRK1-208ENST00000532029 ADGRD2Q7Z7M1 963 aa23.94■■□□□ 1.42
LRRK1-208ENST00000532029 RBM23Q86U06 439 aaKnown RBP23.94■■□□□ 1.42
LRRK1-208ENST00000532029 AOPEPQ8N6M6 819 aa23.94■■□□□ 1.42
LRRK1-208ENST00000532029 LNX1Q8TBB1 728 aaPredicted RBP23.94■■□□□ 1.42
LRRK1-208ENST00000532029 TAS1R2Q8TE23 839 aa23.94■■□□□ 1.42
LRRK1-208ENST00000532029 TAF4BQ92750 862 aa23.94■■□□□ 1.42
LRRK1-208ENST00000532029 RXFP1Q9HBX9 757 aa23.94■■□□□ 1.42
LRRK1-208ENST00000532029 MYO9BQ13459 2157 aa23.93■■□□□ 1.42
LRRK1-208ENST00000532029 KCNJ18B7U540 433 aa23.93■■□□□ 1.42
LRRK1-208ENST00000532029 AFPP02771 609 aaKnown RBP23.93■■□□□ 1.42
LRRK1-208ENST00000532029 NRIP1P48552 1158 aa23.93■■□□□ 1.42
LRRK1-208ENST00000532029 FMO5P49326 533 aa23.93■■□□□ 1.42
LRRK1-208ENST00000532029 MYL7Q01449 175 aa23.93■■□□□ 1.42
LRRK1-208ENST00000532029 CETN1Q12798 172 aa23.93■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms