RNA–Protein interactions for RNA: ENST00000531873.5

CD44-234, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 584 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-234ENST00000531873 MRI1Q9BV20 369 aa3.61□□□□□ -1.83
CD44-234ENST00000531873 STK33Q9BYT3 514 aa3.61□□□□□ -1.83
CD44-234ENST00000531873 TMEM168Q9H0V1 697 aa3.61□□□□□ -1.83
CD44-234ENST00000531873 AGO4Q9HCK5 861 aaKnown RBP3.61□□□□□ -1.83
CD44-234ENST00000531873 IL23AQ9NPF7 189 aa3.61□□□□□ -1.83
CD44-234ENST00000531873 SLAMF7Q9NQ25 335 aa3.61□□□□□ -1.83
CD44-234ENST00000531873 ST6GALNAC1Q9NSC7 600 aaPredicted RBP3.61□□□□□ -1.83
CD44-234ENST00000531873 MOCS1Q9NZB8 636 aa3.61□□□□□ -1.83
CD44-234ENST00000531873 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP3.61□□□□□ -1.83
CD44-234ENST00000531873 PNPLA7Q6ZV29 1317 aa3.61□□□□□ -1.83
CD44-234ENST00000531873 A0A087WZ62 844 aa3.6□□□□□ -1.83
CD44-234ENST00000531873 C9orf118A6NHY6 69 aa3.6□□□□□ -1.83
CD44-234ENST00000531873 TMEM233B4DJY2 109 aa3.6□□□□□ -1.83
CD44-234ENST00000531873 SLC26A4O43511 780 aa3.6□□□□□ -1.83
CD44-234ENST00000531873 PLA2G6O60733 806 aa3.6□□□□□ -1.83
CD44-234ENST00000531873 SASH1O94885 1247 aa3.6□□□□□ -1.83
CD44-234ENST00000531873 MT-ND5P03915 603 aa3.6□□□□□ -1.83
CD44-234ENST00000531873 CSTBP04080 98 aaKnown RBP3.6□□□□□ -1.83
CD44-234ENST00000531873 CYP1A1P04798 512 aaPredicted RBP3.6□□□□□ -1.83
CD44-234ENST00000531873 RARBP10826 455 aa3.6□□□□□ -1.83
CD44-234ENST00000531873 EEF1GP26641 437 aaKnown RBP3.6□□□□□ -1.83
CD44-234ENST00000531873 TECP42680 631 aa3.6□□□□□ -1.83
CD44-234ENST00000531873 ALDH9A1P49189 494 aa3.6□□□□□ -1.83
CD44-234ENST00000531873 APBA1Q02410 837 aa3.6□□□□□ -1.83
CD44-234ENST00000531873 ICA1Q05084 483 aa3.6□□□□□ -1.83
CD44-234ENST00000531873 CTBP1Q13363 440 aa3.6□□□□□ -1.83
CD44-234ENST00000531873 MRPL49Q13405 166 aaKnown RBP3.6□□□□□ -1.83
CD44-234ENST00000531873 BLMHQ13867 455 aa3.6□□□□□ -1.83
CD44-234ENST00000531873 PUM3Q15397 648 aaKnown RBP3.6□□□□□ -1.83
CD44-234ENST00000531873 ELF2Q15723 593 aa3.6□□□□□ -1.83
CD44-234ENST00000531873 FAM214AQ32MH5 1076 aa3.6□□□□□ -1.83
CD44-234ENST00000531873 ARL13BQ3SXY8 428 aa3.6□□□□□ -1.83
CD44-234ENST00000531873 FAM26FQ5R3K3 315 aa3.6□□□□□ -1.83
CD44-234ENST00000531873 ERICH6BQ5W0A0 696 aa3.6□□□□□ -1.83
CD44-234ENST00000531873 ANKS6Q68DC2 871 aa3.6□□□□□ -1.83
CD44-234ENST00000531873 ZNF783Q6ZMS7 281 aa3.6□□□□□ -1.83
CD44-234ENST00000531873 ZNF365Q70YC5 407 aa3.6□□□□□ -1.83
CD44-234ENST00000531873 ZNF761Q86XN6 746 aaPredicted RBP3.6□□□□□ -1.83
CD44-234ENST00000531873 TMEM151BQ8IW70 566 aa3.6□□□□□ -1.83
CD44-234ENST00000531873 SMAP1Q8IYB5 467 aaPredicted RBP3.6□□□□□ -1.83
CD44-234ENST00000531873 SYTL1Q8IYJ3 562 aa3.6□□□□□ -1.83
CD44-234ENST00000531873 CACNA2D3Q8IZS8 1091 aa3.6□□□□□ -1.83
CD44-234ENST00000531873 CARFQ8N187 725 aa3.6□□□□□ -1.83
CD44-234ENST00000531873 MYCT1Q8N699 235 aa3.6□□□□□ -1.83
CD44-234ENST00000531873 FANCBQ8NB91 859 aa3.6□□□□□ -1.83
CD44-234ENST00000531873 PCSK9Q8NBP7 692 aaKnown RBP3.6□□□□□ -1.83
CD44-234ENST00000531873 OR5M3Q8NGP4 307 aa3.6□□□□□ -1.83
CD44-234ENST00000531873 OR56A3Q8NH54 315 aa3.6□□□□□ -1.83
CD44-234ENST00000531873 RABGGTAQ92696 567 aa3.6□□□□□ -1.83
CD44-234ENST00000531873 SNX22Q96L94 193 aa3.6□□□□□ -1.83
CD44-234ENST00000531873 SCLT1Q96NL6 688 aa3.6□□□□□ -1.83
CD44-234ENST00000531873 GDF15Q99988 308 aa3.6□□□□□ -1.83
CD44-234ENST00000531873 ISCA1Q9BUE6 129 aa3.6□□□□□ -1.83
CD44-234ENST00000531873 BARX1Q9HBU1 254 aaPredicted RBP3.6□□□□□ -1.83
CD44-234ENST00000531873 RLIMQ9NVW2 624 aa3.6□□□□□ -1.83
CD44-234ENST00000531873 FBXO34Q9NWN3 711 aa3.6□□□□□ -1.83
CD44-234ENST00000531873 JKAMPQ9P055 326 aa3.6□□□□□ -1.83
CD44-234ENST00000531873 SLC45A2Q9UMX9 530 aa3.6□□□□□ -1.83
CD44-234ENST00000531873 A0A087WWL8 130 aa3.59□□□□□ -1.83
CD44-234ENST00000531873 hCG_1642624A0A1W2PR95 340 aa3.59□□□□□ -1.83
CD44-234ENST00000531873 PMS2P1A4D2B8 440 aa3.59□□□□□ -1.83
CD44-234ENST00000531873 CLCA1A8K7I4 914 aa3.59□□□□□ -1.83
CD44-234ENST00000531873 KIAA0391O15091 583 aaKnown RBP3.59□□□□□ -1.83
CD44-234ENST00000531873 NPHP1O15259 732 aa3.59□□□□□ -1.83
CD44-234ENST00000531873 PJA2O43164 708 aa3.59□□□□□ -1.83
CD44-234ENST00000531873 EIF5BO60841 1220 aaKnown RBP3.59□□□□□ -1.83
CD44-234ENST00000531873 WDHD1O75717 1129 aaPredicted RBP3.59□□□□□ -1.83
CD44-234ENST00000531873 HAUS5O94927 633 aa3.59□□□□□ -1.83
CD44-234ENST00000531873 UNC5CO95185 931 aa3.59□□□□□ -1.83
CD44-234ENST00000531873 THP07101 528 aa3.59□□□□□ -1.83
CD44-234ENST00000531873 ANXA2P07355 339 aaKnown RBP3.59□□□□□ -1.83
CD44-234ENST00000531873 GJB1P08034 283 aa3.59□□□□□ -1.83
CD44-234ENST00000531873 GNAI3P08754 354 aa3.59□□□□□ -1.83
CD44-234ENST00000531873 MTHFD1P11586 935 aaKnown RBP3.59□□□□□ -1.83
CD44-234ENST00000531873 ATP5JP18859 108 aa3.59□□□□□ -1.83
CD44-234ENST00000531873 KCNJ5P48544 419 aa3.59□□□□□ -1.83
CD44-234ENST00000531873 SLC11A2P49281 568 aa3.59□□□□□ -1.83
CD44-234ENST00000531873 GNAI1P63096 354 aa3.59□□□□□ -1.83
CD44-234ENST00000531873 NOMO3P69849 1222 aa3.59□□□□□ -1.83
CD44-234ENST00000531873 CREMQ03060 361 aa3.59□□□□□ -1.83
CD44-234ENST00000531873 EFEMP1Q12805 493 aa3.59□□□□□ -1.83
CD44-234ENST00000531873 RIN1Q13671 783 aa3.59□□□□□ -1.83
CD44-234ENST00000531873 HABP2Q14520 560 aaPredicted RBP3.59□□□□□ -1.83
CD44-234ENST00000531873 PDCD2Q16342 344 aaPredicted RBP3.59□□□□□ -1.83
CD44-234ENST00000531873 CSRP2Q16527 193 aa3.59□□□□□ -1.83
CD44-234ENST00000531873 CCDC38Q502W7 563 aa3.59□□□□□ -1.83
CD44-234ENST00000531873 ZNF385BQ569K4 471 aa3.59□□□□□ -1.83
CD44-234ENST00000531873 CRB2Q5IJ48 1285 aa3.59□□□□□ -1.83
CD44-234ENST00000531873 ZNF529Q6P280 563 aa3.59□□□□□ -1.83
CD44-234ENST00000531873 UBE3BQ7Z3V4 1068 aa3.59□□□□□ -1.83
CD44-234ENST00000531873 ZNF527Q8NB42 609 aa3.59□□□□□ -1.83
CD44-234ENST00000531873 SPATA5Q8NB90 893 aa3.59□□□□□ -1.83
CD44-234ENST00000531873 CCT6BQ92526 530 aa3.59□□□□□ -1.83
CD44-234ENST00000531873 DACT3Q96B18 629 aaPredicted RBP3.59□□□□□ -1.83
CD44-234ENST00000531873 IQCDQ96DY2 449 aa3.59□□□□□ -1.83
CD44-234ENST00000531873 NELL2Q99435 816 aa3.59□□□□□ -1.83
CD44-234ENST00000531873 LSM14BQ9BX40 385 aaKnown RBP3.59□□□□□ -1.83
CD44-234ENST00000531873 PACSIN1Q9BY11 444 aa3.59□□□□□ -1.83
CD44-234ENST00000531873 TINAGL1Q9GZM7 467 aaPredicted RBP3.59□□□□□ -1.83
CD44-234ENST00000531873 MYLK2Q9H1R3 596 aa3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms