RNA–Protein interactions for RNA: ENST00000530567.1

CAPN1-220, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 1,415 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-220ENST00000530567 PTPN14Q15678 1187 aa22.97■■□□□ 1.27
CAPN1-220ENST00000530567 USP41Q3LFD5 358 aa22.97■■□□□ 1.27
CAPN1-220ENST00000530567 CBWD6Q4V339 395 aa22.97■■□□□ 1.27
CAPN1-220ENST00000530567 CBWD3Q5JTY5 395 aa22.97■■□□□ 1.27
CAPN1-220ENST00000530567 CBWD5Q5RIA9 395 aa22.97■■□□□ 1.27
CAPN1-220ENST00000530567 KIAA0319Q5VV43 1072 aa22.97■■□□□ 1.27
CAPN1-220ENST00000530567 TCERG1LQ5VWI1 586 aa22.97■■□□□ 1.27
CAPN1-220ENST00000530567 PLPP4Q5VZY2 271 aa22.97■■□□□ 1.27
CAPN1-220ENST00000530567 TMC7Q7Z402 723 aa22.97■■□□□ 1.27
CAPN1-220ENST00000530567 GAS2L1Q99501 681 aaPredicted RBP22.97■■□□□ 1.27
CAPN1-220ENST00000530567 MMRN2Q9H8L6 949 aa22.97■■□□□ 1.27
CAPN1-220ENST00000530567 ENTPD7Q9NQZ7 604 aa22.97■■□□□ 1.27
CAPN1-220ENST00000530567 HIDE1A8MVS5 230 aa22.96■■□□□ 1.27
CAPN1-220ENST00000530567 PAX3P23760 479 aa22.96■■□□□ 1.27
CAPN1-220ENST00000530567 GLUD2P49448 558 aa22.96■■□□□ 1.27
CAPN1-220ENST00000530567 MXI1P50539 228 aa22.96■■□□□ 1.27
CAPN1-220ENST00000530567 MYL6P60660 151 aa22.96■■□□□ 1.27
CAPN1-220ENST00000530567 NCOA4Q13772 614 aa22.96■■□□□ 1.27
CAPN1-220ENST00000530567 SV2CQ496J9 727 aa22.96■■□□□ 1.27
CAPN1-220ENST00000530567 HSP90AA4PQ58FG1 418 aa22.96■■□□□ 1.27
CAPN1-220ENST00000530567 CDKAL1Q5VV42 579 aa22.96■■□□□ 1.27
CAPN1-220ENST00000530567 PDE12Q6L8Q7 609 aaKnown RBP22.96■■□□□ 1.27
CAPN1-220ENST00000530567 TAS1R2Q8TE23 839 aa22.96■■□□□ 1.27
CAPN1-220ENST00000530567 HPDLQ96IR7 371 aa22.96■■□□□ 1.27
CAPN1-220ENST00000530567 SENP8Q96LD8 212 aa22.96■■□□□ 1.27
CAPN1-220ENST00000530567 TTPALQ9BTX7 342 aa22.96■■□□□ 1.27
CAPN1-220ENST00000530567 HSD3B7Q9H2F3 369 aa22.96■■□□□ 1.27
CAPN1-220ENST00000530567 NGRNQ9NPE2 291 aaKnown RBP22.96■■□□□ 1.27
CAPN1-220ENST00000530567 PCDHB8Q9UN66 801 aa22.96■■□□□ 1.27
CAPN1-220ENST00000530567 IRAK3Q9Y616 596 aa22.96■■□□□ 1.27
CAPN1-220ENST00000530567 C2orf71A6NGG8 1288 aa22.95■■□□□ 1.26
CAPN1-220ENST00000530567 KPNA7A9QM74 516 aa22.95■■□□□ 1.26
CAPN1-220ENST00000530567 SYN3O14994 580 aa22.95■■□□□ 1.26
CAPN1-220ENST00000530567 PHACTR2O75167 634 aa22.95■■□□□ 1.26
CAPN1-220ENST00000530567 STAU1O95793 577 aaKnown RBP22.95■■□□□ 1.26
CAPN1-220ENST00000530567 URODP06132 367 aa22.95■■□□□ 1.26
CAPN1-220ENST00000530567 IGFBP4P22692 258 aa22.95■■□□□ 1.26
CAPN1-220ENST00000530567 SMC1AQ14683 1233 aaKnown RBP22.95■■□□□ 1.26
CAPN1-220ENST00000530567 KRT39Q6A163 491 aa22.95■■□□□ 1.26
CAPN1-220ENST00000530567 DHX40Q8IX18 779 aaKnown RBP22.95■■□□□ 1.26
CAPN1-220ENST00000530567 AOPEPQ8N6M6 819 aa22.95■■□□□ 1.26
CAPN1-220ENST00000530567 MRPL43Q8N983 215 aaKnown RBP22.95■■□□□ 1.26
CAPN1-220ENST00000530567 PIK3R5Q8WYR1 880 aa22.95■■□□□ 1.26
CAPN1-220ENST00000530567 NAT10Q9H0A0 1025 aaKnown RBP22.95■■□□□ 1.26
CAPN1-220ENST00000530567 FANCLQ9NW38 375 aa22.95■■□□□ 1.26
CAPN1-220ENST00000530567 STX10O60499 249 aa22.94■■□□□ 1.26
CAPN1-220ENST00000530567 HLA-DRAP01903 254 aa22.94■■□□□ 1.26
CAPN1-220ENST00000530567 ZNF165P49910 485 aa22.94■■□□□ 1.26
CAPN1-220ENST00000530567 TRPC3Q13507 836 aa22.94■■□□□ 1.26
CAPN1-220ENST00000530567 ADGRD2Q7Z7M1 963 aa22.94■■□□□ 1.26
CAPN1-220ENST00000530567 CEP57Q86XR8 500 aa22.94■■□□□ 1.26
CAPN1-220ENST00000530567 GPR65Q8IYL9 337 aa22.94■■□□□ 1.26
CAPN1-220ENST00000530567 RIN2Q8WYP3 895 aaPredicted RBP22.94■■□□□ 1.26
CAPN1-220ENST00000530567 VRTNQ9H8Y1 702 aa22.94■■□□□ 1.26
CAPN1-220ENST00000530567 GDAP2Q9NXN4 497 aa22.94■■□□□ 1.26
CAPN1-220ENST00000530567 C2CD2LO14523 706 aa22.93■■□□□ 1.26
CAPN1-220ENST00000530567 LRRN2O75325 713 aa22.93■■□□□ 1.26
CAPN1-220ENST00000530567 CXCL14O95715 111 aa22.93■■□□□ 1.26
CAPN1-220ENST00000530567 FOSL2P15408 326 aa22.93■■□□□ 1.26
CAPN1-220ENST00000530567 PIK3CAP42336 1068 aa22.93■■□□□ 1.26
CAPN1-220ENST00000530567 FMO5P49326 533 aa22.93■■□□□ 1.26
CAPN1-220ENST00000530567 IQCB1Q15051 598 aa22.93■■□□□ 1.26
CAPN1-220ENST00000530567 VARS2Q5ST30 1063 aaKnown RBP22.93■■□□□ 1.26
CAPN1-220ENST00000530567 KIAA1841Q6NSI8 718 aa22.93■■□□□ 1.26
CAPN1-220ENST00000530567 PRSS55Q6UWB4 352 aaPredicted RBP22.93■■□□□ 1.26
CAPN1-220ENST00000530567 DSTYKQ6XUX3 929 aa22.93■■□□□ 1.26
CAPN1-220ENST00000530567 FAM114A1Q8IWE2 563 aa22.93■■□□□ 1.26
CAPN1-220ENST00000530567 LNX1Q8TBB1 728 aaPredicted RBP22.93■■□□□ 1.26
CAPN1-220ENST00000530567 MICAL1Q8TDZ2 1067 aa22.93■■□□□ 1.26
CAPN1-220ENST00000530567 SEMA4DQ92854 862 aa22.93■■□□□ 1.26
CAPN1-220ENST00000530567 ELMO3Q96BJ8 720 aa22.93■■□□□ 1.26
CAPN1-220ENST00000530567 MRPL17Q9NRX2 175 aaKnown RBP22.93■■□□□ 1.26
CAPN1-220ENST00000530567 COQ4Q9Y3A0 265 aa22.93■■□□□ 1.26
CAPN1-220ENST00000530567 UTP18Q9Y5J1 556 aaKnown RBP eCLIP22.93■■□□□ 1.263e-6■■■■■ 38.5
CAPN1-220ENST00000530567 TIMM13Q9Y5L4 95 aaPredicted RBP22.93■■□□□ 1.26
CAPN1-220ENST00000530567 REV3LO60673 3130 aa22.93■■□□□ 1.26
CAPN1-220ENST00000530567 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP22.92■■□□□ 1.26
CAPN1-220ENST00000530567 KCNJ18B7U540 433 aa22.92■■□□□ 1.26
CAPN1-220ENST00000530567 CYB561D2O14569 222 aa22.92■■□□□ 1.26
CAPN1-220ENST00000530567 PMM2O15305 246 aa22.92■■□□□ 1.26
CAPN1-220ENST00000530567 ASS1P00966 412 aaKnown RBP22.92■■□□□ 1.26
CAPN1-220ENST00000530567 CYP11A1P05108 521 aa22.92■■□□□ 1.26
CAPN1-220ENST00000530567 ZNF18P17022 549 aa22.92■■□□□ 1.26
CAPN1-220ENST00000530567 ATICP31939 592 aa22.92■■□□□ 1.26
CAPN1-220ENST00000530567 KCNH2Q12809 1159 aa22.92■■□□□ 1.26
CAPN1-220ENST00000530567 MYO1EQ12965 1108 aa22.92■■□□□ 1.26
CAPN1-220ENST00000530567 MRPL58Q14197 206 aaKnown RBP22.92■■□□□ 1.26
CAPN1-220ENST00000530567 KCNJ12Q14500 433 aa22.92■■□□□ 1.26
CAPN1-220ENST00000530567 LIMS2Q7Z4I7 341 aa22.92■■□□□ 1.26
CAPN1-220ENST00000530567 NSUN3Q9H649 340 aaKnown RBP22.92■■□□□ 1.26
CAPN1-220ENST00000530567 RXFP1Q9HBX9 757 aa22.92■■□□□ 1.26
CAPN1-220ENST00000530567 SNX9Q9Y5X1 595 aa22.92■■□□□ 1.26
CAPN1-220ENST00000530567 ODC1P11926 461 aa22.91■■□□□ 1.26
CAPN1-220ENST00000530567 TYMPP19971 482 aa22.91■■□□□ 1.26
CAPN1-220ENST00000530567 ZNF699Q32M78 642 aa22.91■■□□□ 1.26
CAPN1-220ENST00000530567 TCP11X2Q5H9J9 407 aa22.91■■□□□ 1.26
CAPN1-220ENST00000530567 TCEAL5Q5H9L2 206 aa22.91■■□□□ 1.26
CAPN1-220ENST00000530567 APPL2Q8NEU8 664 aa22.91■■□□□ 1.26
CAPN1-220ENST00000530567 PI4K2AQ9BTU6 479 aa22.91■■□□□ 1.26
CAPN1-220ENST00000530567 MTRRQ9UBK8 725 aa22.91■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms