RNA–Protein interactions for RNA: ENST00000526553.5

CD44-223, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 4

Gene CD44, Length 571 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-223ENST00000526553 TLR10Q9BXR5 811 aa6.05□□□□□ -1.44
CD44-223ENST00000526553 KRTAP4-5Q9BYR2 181 aa6.05□□□□□ -1.44
CD44-223ENST00000526553 LMBRD1Q9NUN5 540 aa6.05□□□□□ -1.44
CD44-223ENST00000526553 CFAP97Q9P2B7 532 aa6.05□□□□□ -1.44
CD44-223ENST00000526553 MTO1Q9Y2Z2 717 aaKnown RBP6.05□□□□□ -1.44
CD44-223ENST00000526553 WDR33Q9C0J8 1336 aaKnown RBP6.04□□□□□ -1.44
CD44-223ENST00000526553 ERN1O75460 977 aaKnown RBP6.04□□□□□ -1.44
CD44-223ENST00000526553 EGR2P11161 476 aaPredicted RBP6.04□□□□□ -1.44
CD44-223ENST00000526553 TYRP14679 529 aa6.04□□□□□ -1.44
CD44-223ENST00000526553 HSPA6P17066 643 aa6.04□□□□□ -1.44
CD44-223ENST00000526553 TGM1P22735 817 aa6.04□□□□□ -1.44
CD44-223ENST00000526553 PIK3CGP48736 1102 aa6.04□□□□□ -1.44
CD44-223ENST00000526553 GTF2H3Q13889 308 aa6.04□□□□□ -1.44
CD44-223ENST00000526553 LAIR1Q6GTX8 287 aa6.04□□□□□ -1.44
CD44-223ENST00000526553 PCSK4Q6UW60 755 aa6.04□□□□□ -1.44
CD44-223ENST00000526553 VRK3Q8IV63 474 aa6.04□□□□□ -1.44
CD44-223ENST00000526553 Q8NA96 180 aa6.04□□□□□ -1.44
CD44-223ENST00000526553 TMIEQ8NEW7 156 aa6.04□□□□□ -1.44
CD44-223ENST00000526553 DIS3LQ8TF46 1054 aaKnown RBP6.04□□□□□ -1.44
CD44-223ENST00000526553 SCAMP4Q969E2 229 aa6.04□□□□□ -1.44
CD44-223ENST00000526553 NACC2Q96BF6 587 aa6.04□□□□□ -1.44
CD44-223ENST00000526553 C1GALT1C1Q96EU7 318 aa6.04□□□□□ -1.44
CD44-223ENST00000526553 COQ10AQ96MF6 247 aa6.04□□□□□ -1.44
CD44-223ENST00000526553 BRD9Q9H8M2 597 aa6.04□□□□□ -1.44
CD44-223ENST00000526553 CYP4F11Q9HBI6 524 aa6.04□□□□□ -1.44
CD44-223ENST00000526553 ABCF2Q9UG63 623 aa6.04□□□□□ -1.44
CD44-223ENST00000526553 ZDHHC8Q9ULC8 765 aa6.04□□□□□ -1.44
CD44-223ENST00000526553 SLC45A2Q9UMX9 530 aa6.04□□□□□ -1.44
CD44-223ENST00000526553 CDYLQ9Y232 598 aa6.04□□□□□ -1.44
CD44-223ENST00000526553 NEU2Q9Y3R4 380 aa6.04□□□□□ -1.44
CD44-223ENST00000526553 COL4A3Q01955 1670 aa6.04□□□□□ -1.44
CD44-223ENST00000526553 A0A1W2PS29 197 aa6.03□□□□□ -1.44
CD44-223ENST00000526553 RAMP2O60895 175 aa6.03□□□□□ -1.44
CD44-223ENST00000526553 U2AF1L5P0DN76 240 aaPredicted RBP6.03□□□□□ -1.44
CD44-223ENST00000526553 AVPR1BP47901 424 aa6.03□□□□□ -1.44
CD44-223ENST00000526553 VAV2P52735 878 aa6.03□□□□□ -1.44
CD44-223ENST00000526553 POU6F2P78424 691 aaPredicted RBP6.03□□□□□ -1.44
CD44-223ENST00000526553 U2AF1Q01081 240 aaKnown RBP eCLIP6.03□□□□□ -1.44
CD44-223ENST00000526553 PIGFQ07326 219 aa6.03□□□□□ -1.44
CD44-223ENST00000526553 ZNF844Q08AG5 666 aa6.03□□□□□ -1.44
CD44-223ENST00000526553 ZNF267Q14586 743 aaPredicted RBP6.03□□□□□ -1.44
CD44-223ENST00000526553 NFE2Q16621 373 aaPredicted RBP6.03□□□□□ -1.44
CD44-223ENST00000526553 TPH2Q8IWU9 490 aa6.03□□□□□ -1.44
CD44-223ENST00000526553 COLGALT2Q8IYK4 626 aa6.03□□□□□ -1.44
CD44-223ENST00000526553 GRAMD1CQ8IYS0 662 aa6.03□□□□□ -1.44
CD44-223ENST00000526553 LCORLQ8N3X6 602 aa6.03□□□□□ -1.44
CD44-223ENST00000526553 CHFRQ96EP1 664 aa6.03□□□□□ -1.44
CD44-223ENST00000526553 CDK5RAP3Q96JB5 506 aa6.03□□□□□ -1.44
CD44-223ENST00000526553 TTPALQ9BTX7 342 aa6.03□□□□□ -1.44
CD44-223ENST00000526553 IMPG2Q9BZV3 1241 aa6.03□□□□□ -1.44
CD44-223ENST00000526553 SYBUQ9NX95 663 aa6.03□□□□□ -1.44
CD44-223ENST00000526553 ZFPL1O95159 310 aa6.02□□□□□ -1.45
CD44-223ENST00000526553 MATN4O95460 622 aa6.02□□□□□ -1.45
CD44-223ENST00000526553 CHEK2O96017 543 aa6.02□□□□□ -1.45
CD44-223ENST00000526553 GJB1P08034 283 aa6.02□□□□□ -1.45
CD44-223ENST00000526553 HKR1P10072 659 aa6.02□□□□□ -1.45
CD44-223ENST00000526553 KCNA2P16389 499 aa6.02□□□□□ -1.45
CD44-223ENST00000526553 LPOP22079 712 aaPredicted RBP6.02□□□□□ -1.45
CD44-223ENST00000526553 USP14P54578 494 aa6.02□□□□□ -1.45
CD44-223ENST00000526553 NKX6-1P78426 367 aaPredicted RBP6.02□□□□□ -1.45
CD44-223ENST00000526553 KIF22Q14807 665 aa6.02□□□□□ -1.45
CD44-223ENST00000526553 CXorf57Q6NSI4 855 aaKnown RBP6.02□□□□□ -1.45
CD44-223ENST00000526553 B3GNT9Q6UX72 402 aa6.02□□□□□ -1.45
CD44-223ENST00000526553 CLNKQ7Z7G1 428 aa6.02□□□□□ -1.45
CD44-223ENST00000526553 GPR149Q86SP6 731 aa6.02□□□□□ -1.45
CD44-223ENST00000526553 RAVER1Q8IY67 606 aaKnown RBP6.02□□□□□ -1.45
CD44-223ENST00000526553 CFAP52Q8N1V2 620 aa6.02□□□□□ -1.45
CD44-223ENST00000526553 PDPRQ8NCN5 879 aa6.02□□□□□ -1.45
CD44-223ENST00000526553 SLC17A8Q8NDX2 589 aa6.02□□□□□ -1.45
CD44-223ENST00000526553 JDP2Q8WYK2 163 aa6.02□□□□□ -1.45
CD44-223ENST00000526553 LINC00476Q8WZB0 136 aa6.02□□□□□ -1.45
CD44-223ENST00000526553 C1orf43Q9BWL3 253 aa6.02□□□□□ -1.45
CD44-223ENST00000526553 MRPL46Q9H2W6 279 aaKnown RBP6.02□□□□□ -1.45
CD44-223ENST00000526553 TOR3AQ9H497 397 aa6.02□□□□□ -1.45
CD44-223ENST00000526553 UNKLQ9H9P5 680 aaKnown RBP6.02□□□□□ -1.45
CD44-223ENST00000526553 GPR35Q9HC97 309 aa6.02□□□□□ -1.45
CD44-223ENST00000526553 PNPOQ9NVS9 261 aa6.02□□□□□ -1.45
CD44-223ENST00000526553 CTTNBP2NLQ9P2B4 639 aa6.02□□□□□ -1.45
CD44-223ENST00000526553 STXBP5LQ9Y2K9 1186 aa6.02□□□□□ -1.45
CD44-223ENST00000526553 NR2E3Q9Y5X4 410 aa6.02□□□□□ -1.45
CD44-223ENST00000526553 A0A087X1B8 175 aa6.01□□□□□ -1.45
CD44-223ENST00000526553 PRAMEF33A0A0G2JMD5 474 aa6.01□□□□□ -1.45
CD44-223ENST00000526553 CCDC195A0A1B0GUA6 201 aa6.01□□□□□ -1.45
CD44-223ENST00000526553 PRSS29PA6NIE9 313 aa6.01□□□□□ -1.45
CD44-223ENST00000526553 E9PLN8 166 aa6.01□□□□□ -1.45
CD44-223ENST00000526553 H3BML4 177 aa6.01□□□□□ -1.45
CD44-223ENST00000526553 AP1G1O43747 822 aa6.01□□□□□ -1.45
CD44-223ENST00000526553 PRAMEF10O60809 474 aa6.01□□□□□ -1.45
CD44-223ENST00000526553 RHOBTB3O94955 611 aa6.01□□□□□ -1.45
CD44-223ENST00000526553 GCP02774 474 aa6.01□□□□□ -1.45
CD44-223ENST00000526553 ALDH2P05091 517 aa6.01□□□□□ -1.45
CD44-223ENST00000526553 RARBP10826 455 aa6.01□□□□□ -1.45
CD44-223ENST00000526553 ITGAMP11215 1152 aa6.01□□□□□ -1.45
CD44-223ENST00000526553 FDXRP22570 491 aa6.01□□□□□ -1.45
CD44-223ENST00000526553 PPP2R5AQ15172 486 aa6.01□□□□□ -1.45
CD44-223ENST00000526553 GEN1Q17RS7 908 aa6.01□□□□□ -1.45
CD44-223ENST00000526553 FAM102BQ5T8I3 360 aa6.01□□□□□ -1.45
CD44-223ENST00000526553 HECTD2Q5U5R9 776 aa6.01□□□□□ -1.45
CD44-223ENST00000526553 SP5Q6BEB4 398 aaPredicted RBP6.01□□□□□ -1.45
CD44-223ENST00000526553 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms