RNA–Protein interactions for RNA: ENST00000526025.1

CD44-222, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2 BASIC

Gene CD44, Length 1,052 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-222ENST00000526025 BRCC3P46736 316 aa22.35■■□□□ 1.17
CD44-222ENST00000526025 MYL5Q02045 173 aa22.35■■□□□ 1.17
CD44-222ENST00000526025 CREMQ03060 361 aa22.35■■□□□ 1.17
CD44-222ENST00000526025 PPP3CAQ08209 521 aa22.35■■□□□ 1.17
CD44-222ENST00000526025 PTPN14Q15678 1187 aa22.35■■□□□ 1.17
CD44-222ENST00000526025 ANO6Q4KMQ2 910 aa22.35■■□□□ 1.17
CD44-222ENST00000526025 KIAA0319Q5VV43 1072 aa22.35■■□□□ 1.17
CD44-222ENST00000526025 KRT39Q6A163 491 aa22.35■■□□□ 1.17
CD44-222ENST00000526025 TMC7Q7Z402 723 aa22.35■■□□□ 1.17
CD44-222ENST00000526025 IRF2BP1Q8IU81 584 aa22.35■■□□□ 1.17
CD44-222ENST00000526025 TMEM130Q8N3G9 435 aa22.35■■□□□ 1.17
CD44-222ENST00000526025 PIK3R5Q8WYR1 880 aa22.35■■□□□ 1.17
CD44-222ENST00000526025 PPP2R3CQ969Q6 453 aa22.35■■□□□ 1.17
CD44-222ENST00000526025 FAM84AQ96KN4 292 aa22.35■■□□□ 1.17
CD44-222ENST00000526025 CNOT6LQ96LI5 555 aaKnown RBP22.35■■□□□ 1.17
CD44-222ENST00000526025 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP22.35■■□□□ 1.17
CD44-222ENST00000526025 MRPL17Q9NRX2 175 aaKnown RBP22.35■■□□□ 1.17
CD44-222ENST00000526025 GDAP2Q9NXN4 497 aa22.35■■□□□ 1.17
CD44-222ENST00000526025 FSD2A1L4K1 749 aa22.34■■□□□ 1.17
CD44-222ENST00000526025 KPNA7A9QM74 516 aa22.34■■□□□ 1.17
CD44-222ENST00000526025 TULP1O00294 542 aaPredicted RBP22.34■■□□□ 1.17
CD44-222ENST00000526025 SPTLC1O15269 473 aa22.34■■□□□ 1.17
CD44-222ENST00000526025 N4BP1O75113 896 aaKnown RBP22.34■■□□□ 1.17
CD44-222ENST00000526025 PHACTR2O75167 634 aa22.34■■□□□ 1.17
CD44-222ENST00000526025 PRKCSHP14314 528 aaPredicted RBP22.34■■□□□ 1.17
CD44-222ENST00000526025 MXI1P50539 228 aa22.34■■□□□ 1.17
CD44-222ENST00000526025 BIRC3Q13489 604 aa22.34■■□□□ 1.17
CD44-222ENST00000526025 TRPC3Q13507 836 aa22.34■■□□□ 1.17
CD44-222ENST00000526025 MRPL43Q8N983 215 aaKnown RBP22.34■■□□□ 1.17
CD44-222ENST00000526025 APPL2Q8NEU8 664 aa22.34■■□□□ 1.17
CD44-222ENST00000526025 SPATA18Q8TC71 538 aa22.34■■□□□ 1.17
CD44-222ENST00000526025 MYLIPQ8WY64 445 aa22.34■■□□□ 1.17
CD44-222ENST00000526025 TAF4BQ92750 862 aa22.34■■□□□ 1.17
CD44-222ENST00000526025 NSUN3Q9H649 340 aaKnown RBP22.34■■□□□ 1.17
CD44-222ENST00000526025 RXFP1Q9HBX9 757 aa22.34■■□□□ 1.17
CD44-222ENST00000526025 NFE2L3Q9Y4A8 694 aa22.34■■□□□ 1.17
CD44-222ENST00000526025 P4HA2O15460 535 aa22.33■■□□□ 1.17
CD44-222ENST00000526025 VNN1O95497 513 aa22.33■■□□□ 1.17
CD44-222ENST00000526025 CYP11A1P05108 521 aa22.33■■□□□ 1.17
CD44-222ENST00000526025 ODC1P11926 461 aa22.33■■□□□ 1.17
CD44-222ENST00000526025 FOSL2P15408 326 aa22.33■■□□□ 1.17
CD44-222ENST00000526025 EEF1GP26641 437 aaKnown RBP22.33■■□□□ 1.17
CD44-222ENST00000526025 IRS1P35568 1242 aa22.33■■□□□ 1.17
CD44-222ENST00000526025 GCLMP48507 274 aa22.33■■□□□ 1.17
CD44-222ENST00000526025 NCOA4Q13772 614 aa22.33■■□□□ 1.17
CD44-222ENST00000526025 DCAF17Q5H9S7 520 aaPredicted RBP22.33■■□□□ 1.17
CD44-222ENST00000526025 RTP2Q5QGT7 225 aa22.33■■□□□ 1.17
CD44-222ENST00000526025 TCERG1LQ5VWI1 586 aa22.33■■□□□ 1.17
CD44-222ENST00000526025 KIAA1841Q6NSI8 718 aa22.33■■□□□ 1.17
CD44-222ENST00000526025 ANKS3Q6ZW76 656 aa22.33■■□□□ 1.17
CD44-222ENST00000526025 TAS1R1Q7RTX1 841 aa22.33■■□□□ 1.17
CD44-222ENST00000526025 HPDLQ96IR7 371 aa22.33■■□□□ 1.17
CD44-222ENST00000526025 SENP8Q96LD8 212 aa22.33■■□□□ 1.17
CD44-222ENST00000526025 OXCT2Q9BYC2 517 aaPredicted RBP22.33■■□□□ 1.17
CD44-222ENST00000526025 XYLT2Q9H1B5 865 aa22.33■■□□□ 1.17
CD44-222ENST00000526025 FNIP2Q9P278 1114 aa22.33■■□□□ 1.17
CD44-222ENST00000526025 MAGEC2Q9UBF1 373 aaPredicted RBP22.33■■□□□ 1.17
CD44-222ENST00000526025 DSEQ9UL01 958 aa22.33■■□□□ 1.17
CD44-222ENST00000526025 COQ4Q9Y3A0 265 aa22.33■■□□□ 1.17
CD44-222ENST00000526025 C2orf71A6NGG8 1288 aa22.32■■□□□ 1.16
CD44-222ENST00000526025 CXCL14O95715 111 aa22.32■■□□□ 1.16
CD44-222ENST00000526025 C1RP00736 705 aa22.32■■□□□ 1.16
CD44-222ENST00000526025 CST3P01034 146 aaPredicted RBP22.32■■□□□ 1.16
CD44-222ENST00000526025 MRPL58Q14197 206 aaKnown RBP22.32■■□□□ 1.16
CD44-222ENST00000526025 SGSM1Q2NKQ1 1148 aa22.32■■□□□ 1.16
CD44-222ENST00000526025 CDKAL1Q5VV42 579 aa22.32■■□□□ 1.16
CD44-222ENST00000526025 PLPP4Q5VZY2 271 aa22.32■■□□□ 1.16
CD44-222ENST00000526025 DSTYKQ6XUX3 929 aa22.32■■□□□ 1.16
CD44-222ENST00000526025 DPH6Q7L8W6 267 aa22.32■■□□□ 1.16
CD44-222ENST00000526025 MICAL1Q8TDZ2 1067 aa22.32■■□□□ 1.16
CD44-222ENST00000526025 CDCA3Q99618 268 aaPredicted RBP22.32■■□□□ 1.16
CD44-222ENST00000526025 UTP18Q9Y5J1 556 aaKnown RBP eCLIP22.32■■□□□ 1.16
CD44-222ENST00000526025 BACE2Q9Y5Z0 518 aa22.32■■□□□ 1.16
CD44-222ENST00000526025 I3L4J1 428 aa22.31■■□□□ 1.16
CD44-222ENST00000526025 OAZ2O95190 189 aa22.31■■□□□ 1.16
CD44-222ENST00000526025 FAM163BP0C2L3 166 aa22.31■■□□□ 1.16
CD44-222ENST00000526025 IGFBP4P22692 258 aa22.31■■□□□ 1.16
CD44-222ENST00000526025 TKTP29401 623 aaKnown RBP22.31■■□□□ 1.16
CD44-222ENST00000526025 FMO5P49326 533 aa22.31■■□□□ 1.16
CD44-222ENST00000526025 ZNF165P49910 485 aa22.31■■□□□ 1.16
CD44-222ENST00000526025 NCAPHQ15003 741 aa22.31■■□□□ 1.16
CD44-222ENST00000526025 LIMS2Q7Z4I7 341 aa22.31■■□□□ 1.16
CD44-222ENST00000526025 TMEM86AQ8N2M4 240 aa22.31■■□□□ 1.16
CD44-222ENST00000526025 TOP6BLQ8N6T0 577 aa22.31■■□□□ 1.16
CD44-222ENST00000526025 FBXL13Q8NEE6 735 aa22.31■■□□□ 1.16
CD44-222ENST00000526025 RIN2Q8WYP3 895 aaPredicted RBP22.31■■□□□ 1.16
CD44-222ENST00000526025 FAXDC2Q96IV6 333 aa22.31■■□□□ 1.16
CD44-222ENST00000526025 EMILIN2Q9BXX0 1053 aa22.31■■□□□ 1.16
CD44-222ENST00000526025 MTCL1Q9Y4B5 1905 aaKnown RBP22.31■■□□□ 1.16
CD44-222ENST00000526025 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP22.3■■□□□ 1.16
CD44-222ENST00000526025 SMTNL1A8MU46 457 aa22.3■■□□□ 1.16
CD44-222ENST00000526025 H7C4K7 107 aa22.3■■□□□ 1.16
CD44-222ENST00000526025 CYB561D2O14569 222 aa22.3■■□□□ 1.16
CD44-222ENST00000526025 ASS1P00966 412 aaKnown RBP22.3■■□□□ 1.16
CD44-222ENST00000526025 HLA-DRAP01903 254 aa22.3■■□□□ 1.16
CD44-222ENST00000526025 PIK3CAP42336 1068 aa22.3■■□□□ 1.16
CD44-222ENST00000526025 MYL6P60660 151 aa22.3■■□□□ 1.16
CD44-222ENST00000526025 ZNF699Q32M78 642 aa22.3■■□□□ 1.16
CD44-222ENST00000526025 VARS2Q5ST30 1063 aaKnown RBP22.3■■□□□ 1.16
CD44-222ENST00000526025 SCARA3Q6AZY7 606 aa22.3■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms