RNA–Protein interactions for RNA: ENST00000525469.1

CD44-218, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 705 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-218ENST00000525469 KCT2Q8NC54 265 aa5.47□□□□□ -1.53
CD44-218ENST00000525469 SMRP1Q8NCR6 262 aa5.47□□□□□ -1.53
CD44-218ENST00000525469 TRIM58Q8NG06 486 aa5.47□□□□□ -1.53
CD44-218ENST00000525469 FAM81AQ8TBF8 368 aa5.47□□□□□ -1.53
CD44-218ENST00000525469 PPP1R13LQ8WUF5 828 aa5.47□□□□□ -1.53
CD44-218ENST00000525469 PPP1R13BQ96KQ4 1090 aa5.47□□□□□ -1.53
CD44-218ENST00000525469 FGD4Q96M96 766 aa5.47□□□□□ -1.53
CD44-218ENST00000525469 GDAP1L1Q96MZ0 367 aa5.47□□□□□ -1.53
CD44-218ENST00000525469 WDR11Q9BZH6 1224 aa5.47□□□□□ -1.53
CD44-218ENST00000525469 CRNKL1Q9BZJ0 848 aaKnown RBP5.47□□□□□ -1.53
CD44-218ENST00000525469 API5Q9BZZ5 524 aaKnown RBP5.47□□□□□ -1.53
CD44-218ENST00000525469 LRRCC1Q9C099 1032 aa5.47□□□□□ -1.53
CD44-218ENST00000525469 LNPKQ9C0E8 428 aa5.47□□□□□ -1.53
CD44-218ENST00000525469 CLSTN2Q9H4D0 955 aa5.47□□□□□ -1.53
CD44-218ENST00000525469 ACAD9Q9H845 621 aa5.47□□□□□ -1.53
CD44-218ENST00000525469 KANSL2Q9H9L4 492 aa5.47□□□□□ -1.53
CD44-218ENST00000525469 LRRC4CQ9HCJ2 640 aa5.47□□□□□ -1.53
CD44-218ENST00000525469 VTA1Q9NP79 307 aa5.47□□□□□ -1.53
CD44-218ENST00000525469 LUC7LQ9NQ29 371 aaKnown RBP5.47□□□□□ -1.53
CD44-218ENST00000525469 PDGFCQ9NRA1 345 aa5.47□□□□□ -1.53
CD44-218ENST00000525469 KLC4Q9NSK0 619 aa5.47□□□□□ -1.53
CD44-218ENST00000525469 TUBA8Q9NY65 449 aaPredicted RBP5.47□□□□□ -1.53
CD44-218ENST00000525469 UTP6Q9NYH9 597 aaKnown RBP5.47□□□□□ -1.53
CD44-218ENST00000525469 DLL3Q9NYJ7 618 aa5.47□□□□□ -1.53
CD44-218ENST00000525469 MAGEC2Q9UBF1 373 aaPredicted RBP5.47□□□□□ -1.53
CD44-218ENST00000525469 HOOK1Q9UJC3 728 aaKnown RBP5.47□□□□□ -1.53
CD44-218ENST00000525469 CFAP45Q9UL16 551 aa5.47□□□□□ -1.53
CD44-218ENST00000525469 CORO1CQ9ULV4 474 aaPredicted RBP5.47□□□□□ -1.53
CD44-218ENST00000525469 USP15Q9Y4E8 981 aaPredicted RBP5.47□□□□□ -1.53
CD44-218ENST00000525469 PCDHGC5Q9Y5F6 944 aa5.47□□□□□ -1.53
CD44-218ENST00000525469 GMEB1Q9Y692 573 aa5.47□□□□□ -1.53
CD44-218ENST00000525469 CEP250Q9BV73 2442 aa5.47□□□□□ -1.53
CD44-218ENST00000525469 CFAP47Q6ZTR5 3102 aa5.47□□□□□ -1.53
CD44-218ENST00000525469 RALGAPA1Q6GYQ0 2036 aa5.47□□□□□ -1.53
CD44-218ENST00000525469 FANCMQ8IYD8 2048 aa5.47□□□□□ -1.53
CD44-218ENST00000525469 TARSL2A2RTX5 802 aaKnown RBP5.46□□□□□ -1.54
CD44-218ENST00000525469 FAM170BA6NMN3 283 aa5.46□□□□□ -1.54
CD44-218ENST00000525469 TMEM232C9JQI7 657 aa5.46□□□□□ -1.54
CD44-218ENST00000525469 ENC1O14682 589 aa5.46□□□□□ -1.54
CD44-218ENST00000525469 LINC01565O15544 149 aa5.46□□□□□ -1.54
CD44-218ENST00000525469 PRC1O43663 620 aa5.46□□□□□ -1.54
CD44-218ENST00000525469 NBNO60934 754 aa5.46□□□□□ -1.54
CD44-218ENST00000525469 URI1O94763 535 aaPredicted RBP5.46□□□□□ -1.54
CD44-218ENST00000525469 MED26O95402 600 aa5.46□□□□□ -1.54
CD44-218ENST00000525469 PRNPP04156 253 aa5.46□□□□□ -1.54
CD44-218ENST00000525469 SRGAP2BP0DMP2 458 aa5.46□□□□□ -1.54
CD44-218ENST00000525469 CKBP12277 381 aa5.46□□□□□ -1.54
CD44-218ENST00000525469 AKR1B1P15121 316 aa5.46□□□□□ -1.54
CD44-218ENST00000525469 ATF7P17544 494 aaPredicted RBP5.46□□□□□ -1.54
CD44-218ENST00000525469 ATP5JP18859 108 aa5.46□□□□□ -1.54
CD44-218ENST00000525469 SCP2P22307 547 aa5.46□□□□□ -1.54
CD44-218ENST00000525469 HSPA4P34932 840 aa5.46□□□□□ -1.54
CD44-218ENST00000525469 ADMP35318 185 aa5.46□□□□□ -1.54
CD44-218ENST00000525469 CLCN5P51795 746 aa5.46□□□□□ -1.54
CD44-218ENST00000525469 OAZ1P54368 228 aa5.46□□□□□ -1.54
CD44-218ENST00000525469 CCZ1BP86790 482 aa5.46□□□□□ -1.54
CD44-218ENST00000525469 CCZ1P86791 482 aaPredicted RBP5.46□□□□□ -1.54
CD44-218ENST00000525469 GABPAQ06546 454 aa5.46□□□□□ -1.54
CD44-218ENST00000525469 ZNF252P-AS1Q0IIN9 211 aa5.46□□□□□ -1.54
CD44-218ENST00000525469 MYBPC2Q14324 1141 aa5.46□□□□□ -1.54
CD44-218ENST00000525469 NAA25Q14CX7 972 aa5.46□□□□□ -1.54
CD44-218ENST00000525469 ANKRD1Q15327 319 aa5.46□□□□□ -1.54
CD44-218ENST00000525469 ANGPT1Q15389 498 aa5.46□□□□□ -1.54
CD44-218ENST00000525469 WHAMMP3Q1A5X7 153 aa5.46□□□□□ -1.54
CD44-218ENST00000525469 MSMPQ1L6U9 139 aa5.46□□□□□ -1.54
CD44-218ENST00000525469 ANO6Q4KMQ2 910 aa5.46□□□□□ -1.54
CD44-218ENST00000525469 ACBD5Q5T8D3 534 aaPredicted RBP5.46□□□□□ -1.54
CD44-218ENST00000525469 VPS53Q5VIR6 699 aa5.46□□□□□ -1.54
CD44-218ENST00000525469 CAPRIN2Q6IMN6 1127 aaKnown RBP5.46□□□□□ -1.54
CD44-218ENST00000525469 TAPT1Q6NXT6 567 aa5.46□□□□□ -1.54
CD44-218ENST00000525469 ZC3H14Q6PJT7 736 aaKnown RBP5.46□□□□□ -1.54
CD44-218ENST00000525469 LIN28BQ6ZN17 250 aaKnown RBP eCLIP5.46□□□□□ -1.54
CD44-218ENST00000525469 CCDC80Q76M96 950 aa5.46□□□□□ -1.54
CD44-218ENST00000525469 SV2BQ7L1I2 683 aa5.46□□□□□ -1.54
CD44-218ENST00000525469 ZNF765Q7L2R6 523 aa5.46□□□□□ -1.54
CD44-218ENST00000525469 SPATA21Q7Z572 469 aa5.46□□□□□ -1.54
CD44-218ENST00000525469 SIAH1Q8IUQ4 282 aa5.46□□□□□ -1.54
CD44-218ENST00000525469 FAM114A1Q8IWE2 563 aa5.46□□□□□ -1.54
CD44-218ENST00000525469 TMTC2Q8N394 836 aa5.46□□□□□ -1.54
CD44-218ENST00000525469 SDR16C5Q8N3Y7 309 aa5.46□□□□□ -1.54
CD44-218ENST00000525469 ARFGAP2Q8N6H7 521 aa5.46□□□□□ -1.54
CD44-218ENST00000525469 FAM133AQ8N9E0 248 aa5.46□□□□□ -1.54
CD44-218ENST00000525469 KREMEN2Q8NCW0 462 aa5.46□□□□□ -1.54
CD44-218ENST00000525469 AGBL5Q8NDL9 886 aa5.46□□□□□ -1.54
CD44-218ENST00000525469 FLCNQ8NFG4 579 aa5.46□□□□□ -1.54
CD44-218ENST00000525469 CFAP61Q8NHU2 1237 aa5.46□□□□□ -1.54
CD44-218ENST00000525469 SMARCC2Q8TAQ2 1214 aa5.46□□□□□ -1.54
CD44-218ENST00000525469 CYP2W1Q8TAV3 490 aa5.46□□□□□ -1.54
CD44-218ENST00000525469 MICAL1Q8TDZ2 1067 aa5.46□□□□□ -1.54
CD44-218ENST00000525469 MISP3Q96FF7 219 aa5.46□□□□□ -1.54
CD44-218ENST00000525469 MSLNLQ96KJ4 702 aa5.46□□□□□ -1.54
CD44-218ENST00000525469 LZTS2Q9BRK4 669 aa5.46□□□□□ -1.54
CD44-218ENST00000525469 NAA15Q9BXJ9 866 aaKnown RBP5.46□□□□□ -1.54
CD44-218ENST00000525469 OSBPL7Q9BZF2 842 aa5.46□□□□□ -1.54
CD44-218ENST00000525469 NRDE2Q9H7Z3 1164 aa5.46□□□□□ -1.54
CD44-218ENST00000525469 CIDEBQ9UHD4 219 aa5.46□□□□□ -1.54
CD44-218ENST00000525469 RALYQ9UKM9 306 aaKnown RBP5.46□□□□□ -1.54
CD44-218ENST00000525469 SORCS3Q9UPU3 1222 aa5.46□□□□□ -1.54
CD44-218ENST00000525469 TMA7Q9Y2S6 64 aaKnown RBP5.46□□□□□ -1.54
CD44-218ENST00000525469 NR2E1Q9Y466 385 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms