RNA–Protein interactions for RNA: ENST00000520953.5

SREK1-209, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 5

Gene SREK1, Length 2,172 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-209ENST00000520953 PGBD4Q96DM1 585 aa16.15■□□□□ 0.18
SREK1-209ENST00000520953 IQCDQ96DY2 449 aa16.15■□□□□ 0.18
SREK1-209ENST00000520953 LAMA3Q16787 3333 aa16.15■□□□□ 0.18
SREK1-209ENST00000520953 A0A0U1RQJ8 604 aa16.14■□□□□ 0.17
SREK1-209ENST00000520953 ANO9A1A5B4 782 aa16.14■□□□□ 0.17
SREK1-209ENST00000520953 TDRD15B5MCY1 1934 aaKnown RBP16.14■□□□□ 0.17
SREK1-209ENST00000520953 CTIFO43310 598 aaKnown RBP16.14■□□□□ 0.17
SREK1-209ENST00000520953 THP07101 528 aa16.14■□□□□ 0.17
SREK1-209ENST00000520953 CLCNKBP51801 687 aa16.14■□□□□ 0.17
SREK1-209ENST00000520953 GCNT1Q02742 428 aa16.14■□□□□ 0.17
SREK1-209ENST00000520953 ORC1Q13415 861 aa16.14■□□□□ 0.17
SREK1-209ENST00000520953 ASIC2Q16515 512 aa16.14■□□□□ 0.17
SREK1-209ENST00000520953 MFSD5Q6N075 450 aa16.14■□□□□ 0.17
SREK1-209ENST00000520953 ZNF280BQ86YH2 543 aa16.14■□□□□ 0.17
SREK1-209ENST00000520953 CRIPAKQ8N1N5 446 aa16.14■□□□□ 0.17
SREK1-209ENST00000520953 OLIG1Q8TAK6 271 aa16.14■□□□□ 0.17
SREK1-209ENST00000520953 ATRIPQ8WXE1 791 aa16.14■□□□□ 0.17
SREK1-209ENST00000520953 APBB2Q92870 758 aa16.14■□□□□ 0.17
SREK1-209ENST00000520953 AIPL1Q9NZN9 384 aa16.14■□□□□ 0.17
SREK1-209ENST00000520953 KIF2AO00139 706 aaPredicted RBP16.14■□□□□ 0.17
SREK1-209ENST00000520953 PIRO00625 290 aa16.14■□□□□ 0.17
SREK1-209ENST00000520953 CYP26A1O43174 497 aa16.14■□□□□ 0.17
SREK1-209ENST00000520953 UPP2O95045 317 aa16.14■□□□□ 0.17
SREK1-209ENST00000520953 STAT1P42224 750 aa16.14■□□□□ 0.17
SREK1-209ENST00000520953 PAN2Q504Q3 1202 aaKnown RBP16.14■□□□□ 0.17
SREK1-209ENST00000520953 C16orf59Q7L2K0 433 aa16.14■□□□□ 0.17
SREK1-209ENST00000520953 IMPG2Q9BZV3 1241 aa16.14■□□□□ 0.17
SREK1-209ENST00000520953 NIF3L1Q9GZT8 377 aa16.14■□□□□ 0.17
SREK1-209ENST00000520953 HAUS4Q9H6D7 363 aa16.14■□□□□ 0.17
SREK1-209ENST00000520953 TMEM161AQ9NX61 479 aa16.14■□□□□ 0.17
SREK1-209ENST00000520953 HMGXB4Q9UGU5 601 aa16.14■□□□□ 0.17
SREK1-209ENST00000520953 CEP290O15078 2479 aa16.14■□□□□ 0.17
SREK1-209ENST00000520953 DDHD2O94830 711 aa16.13■□□□□ 0.17
SREK1-209ENST00000520953 EOMESO95936 686 aa16.13■□□□□ 0.17
SREK1-209ENST00000520953 SKIP12755 728 aa16.13■□□□□ 0.17
SREK1-209ENST00000520953 KRT5P13647 590 aa16.13■□□□□ 0.17
SREK1-209ENST00000520953 EIF4A3P38919 411 aaKnown RBP16.13■□□□□ 0.17
SREK1-209ENST00000520953 EPHB4P54760 987 aa16.13■□□□□ 0.17
SREK1-209ENST00000520953 MFAP3P55082 362 aa16.13■□□□□ 0.17
SREK1-209ENST00000520953 ZNF571Q7Z3V5 609 aaPredicted RBP16.13■□□□□ 0.17
SREK1-209ENST00000520953 SLC47A2Q86VL8 602 aa16.13■□□□□ 0.17
SREK1-209ENST00000520953 DNAAF5Q86Y56 855 aa16.13■□□□□ 0.17
SREK1-209ENST00000520953 UBR7Q8N806 425 aa16.13■□□□□ 0.17
SREK1-209ENST00000520953 SLC20A1Q8WUM9 679 aa16.13■□□□□ 0.17
SREK1-209ENST00000520953 BADQ92934 168 aa16.13■□□□□ 0.17
SREK1-209ENST00000520953 ABHD8Q96I13 439 aa16.13■□□□□ 0.17
SREK1-209ENST00000520953 NHEJ1Q9H9Q4 299 aaPredicted RBP16.13■□□□□ 0.17
SREK1-209ENST00000520953 CCP110O43303 1012 aa16.13■□□□□ 0.17
SREK1-209ENST00000520953 HCRTO43612 131 aa16.13■□□□□ 0.17
SREK1-209ENST00000520953 DEFB103AP81534 67 aa16.13■□□□□ 0.17
SREK1-209ENST00000520953 PTK2Q05397 1052 aa16.13■□□□□ 0.17
SREK1-209ENST00000520953 ZNF394Q53GI3 561 aa16.13■□□□□ 0.17
SREK1-209ENST00000520953 TDRD12Q587J7 1177 aaKnown RBP16.13■□□□□ 0.17
SREK1-209ENST00000520953 ZNF667Q5HYK9 610 aa16.13■□□□□ 0.17
SREK1-209ENST00000520953 CNKSR3Q6P9H4 555 aa16.13■□□□□ 0.17
SREK1-209ENST00000520953 REXO1L1PQ8IX06 675 aa16.13■□□□□ 0.17
SREK1-209ENST00000520953 FAM71AQ8IYT1 594 aa16.13■□□□□ 0.17
SREK1-209ENST00000520953 ACRBPQ8NEB7 543 aa16.13■□□□□ 0.17
SREK1-209ENST00000520953 TFR2Q9UP52 801 aa16.13■□□□□ 0.17
SREK1-209ENST00000520953 NME7Q9Y5B8 376 aa16.13■□□□□ 0.17
SREK1-209ENST00000520953 SNX9Q9Y5X1 595 aa16.13■□□□□ 0.17
SREK1-209ENST00000520953 ITGB1P05556 798 aa16.12■□□□□ 0.17
SREK1-209ENST00000520953 RFX1P22670 979 aa16.12■□□□□ 0.17
SREK1-209ENST00000520953 SSTR3P32745 418 aaPredicted RBP16.12■□□□□ 0.17
SREK1-209ENST00000520953 TSR1Q2NL82 804 aaKnown RBP16.12■□□□□ 0.17
SREK1-209ENST00000520953 FAM117BQ6P1L5 589 aa16.12■□□□□ 0.17
SREK1-209ENST00000520953 GLB1LQ6UWU2 654 aa16.12■□□□□ 0.17
SREK1-209ENST00000520953 CYP26C1Q6V0L0 522 aa16.12■□□□□ 0.17
SREK1-209ENST00000520953 KIF18AQ8NI77 898 aa16.12■□□□□ 0.17
SREK1-209ENST00000520953 HASPINQ8TF76 798 aa16.12■□□□□ 0.17
SREK1-209ENST00000520953 SYN2Q92777 582 aaPredicted RBP16.12■□□□□ 0.17
SREK1-209ENST00000520953 TWNKQ96RR1 684 aa16.12■□□□□ 0.17
SREK1-209ENST00000520953 CISHQ9NSE2 258 aa16.12■□□□□ 0.17
SREK1-209ENST00000520953 TBC1D13Q9NVG8 400 aa16.12■□□□□ 0.17
SREK1-209ENST00000520953 ZNHIT6Q9NWK9 470 aaKnown RBP16.12■□□□□ 0.17
SREK1-209ENST00000520953 DNAJB4Q9UDY4 337 aa16.12■□□□□ 0.17
SREK1-209ENST00000520953 ZMYND8Q9ULU4 1186 aaPredicted RBP16.12■□□□□ 0.17
SREK1-209ENST00000520953 PCDHB7Q9Y5E2 793 aa16.12■□□□□ 0.17
SREK1-209ENST00000520953 LTBP2Q14767 1821 aa16.12■□□□□ 0.17
SREK1-209ENST00000520953 I3L4J1 428 aa16.11■□□□□ 0.17
SREK1-209ENST00000520953 ZNF263O14978 683 aa16.11■□□□□ 0.17
SREK1-209ENST00000520953 PARNO95453 639 aaKnown RBP16.11■□□□□ 0.17
SREK1-209ENST00000520953 CAPN2P17655 700 aa16.11■□□□□ 0.17
SREK1-209ENST00000520953 CYP3A5P20815 502 aa16.11■□□□□ 0.17
SREK1-209ENST00000520953 LRPAP1P30533 357 aa16.11■□□□□ 0.17
SREK1-209ENST00000520953 KLHL30Q0D2K2 578 aa16.11■□□□□ 0.17
SREK1-209ENST00000520953 NOMO2Q5JPE7 1267 aa16.11■□□□□ 0.17
SREK1-209ENST00000520953 TMEM270Q6UE05 265 aa16.11■□□□□ 0.17
SREK1-209ENST00000520953 OTOP2Q7RTS6 562 aa16.11■□□□□ 0.17
SREK1-209ENST00000520953 PALB2Q86YC2 1186 aa16.11■□□□□ 0.17
SREK1-209ENST00000520953 TMTC1Q8IUR5 882 aa16.11■□□□□ 0.17
SREK1-209ENST00000520953 CASD1Q96PB1 797 aa16.11■□□□□ 0.17
SREK1-209ENST00000520953 BCO2Q9BYV7 579 aa16.11■□□□□ 0.17
SREK1-209ENST00000520953 VRTNQ9H8Y1 702 aa16.11■□□□□ 0.17
SREK1-209ENST00000520953 MYO6Q9UM54 1294 aa16.11■□□□□ 0.17
SREK1-209ENST00000520953 PPP2R2CQ9Y2T4 447 aa16.11■□□□□ 0.17
SREK1-209ENST00000520953 REXO2Q9Y3B8 237 aaKnown RBP16.11■□□□□ 0.17
SREK1-209ENST00000520953 PCDHB4Q9Y5E5 795 aa16.11■□□□□ 0.17
SREK1-209ENST00000520953 PODXLO00592 558 aa16.11■□□□□ 0.17
SREK1-209ENST00000520953 SERPING1P05155 500 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms