RNA–Protein interactions for RNA: ENST00000519684.5

HMGB4-203, Transcript of high mobility group box 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB4, Length 2,343 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4-203ENST00000519684 GRB14Q14449 540 aa8.98□□□□□ -0.97
HMGB4-203ENST00000519684 TRADDQ15628 312 aa8.98□□□□□ -0.97
HMGB4-203ENST00000519684 MAMDC4Q6UXC1 1216 aa8.98□□□□□ -0.97
HMGB4-203ENST00000519684 SCARA5Q6ZMJ2 495 aa8.98□□□□□ -0.97
HMGB4-203ENST00000519684 MMS22LQ6ZRQ5 1243 aa8.98□□□□□ -0.97
HMGB4-203ENST00000519684 PHLDB2Q86SQ0 1253 aa8.98□□□□□ -0.97
HMGB4-203ENST00000519684 CDR2LQ86X02 465 aaPredicted RBP8.98□□□□□ -0.97
HMGB4-203ENST00000519684 DDX42Q86XP3 938 aaKnown RBP eCLIP8.98□□□□□ -0.97
HMGB4-203ENST00000519684 SLC13A5Q86YT5 568 aaPredicted RBP8.98□□□□□ -0.97
HMGB4-203ENST00000519684 UBR7Q8N806 425 aa8.98□□□□□ -0.97
HMGB4-203ENST00000519684 FAM76AQ8TAV0 307 aa8.98□□□□□ -0.97
HMGB4-203ENST00000519684 NLRP7Q8WX94 980 aa8.98□□□□□ -0.97
HMGB4-203ENST00000519684 ZIM3Q96PE6 472 aa8.98□□□□□ -0.97
HMGB4-203ENST00000519684 PPP1R16BQ96T49 567 aa8.98□□□□□ -0.97
HMGB4-203ENST00000519684 FDXACB1Q9BRP7 624 aaPredicted RBP8.98□□□□□ -0.97
HMGB4-203ENST00000519684 TRIM51Q9BSJ1 452 aa8.98□□□□□ -0.97
HMGB4-203ENST00000519684 ERVK-5Q9HDB9 667 aa8.98□□□□□ -0.97
HMGB4-203ENST00000519684 CISHQ9NSE2 258 aa8.98□□□□□ -0.97
HMGB4-203ENST00000519684 PARVAQ9NVD7 372 aa8.98□□□□□ -0.97
HMGB4-203ENST00000519684 ZHX1Q9UKY1 873 aaPredicted RBP8.98□□□□□ -0.97
HMGB4-203ENST00000519684 NR2E1Q9Y466 385 aa8.98□□□□□ -0.97
HMGB4-203ENST00000519684 EVPLQ92817 2033 aa8.97□□□□□ -0.97
HMGB4-203ENST00000519684 GOLGA6L10A6NI86 522 aa8.97□□□□□ -0.97
HMGB4-203ENST00000519684 H3BRB1 525 aa8.97□□□□□ -0.97
HMGB4-203ENST00000519684 PROSCO94903 275 aa8.97□□□□□ -0.97
HMGB4-203ENST00000519684 SNAI1O95863 264 aaPredicted RBP8.97□□□□□ -0.97
HMGB4-203ENST00000519684 CALB1P05937 261 aa8.97□□□□□ -0.97
HMGB4-203ENST00000519684 CXCL8P10145 99 aa8.97□□□□□ -0.97
HMGB4-203ENST00000519684 POU5F1Q01860 360 aaKnown RBP8.97□□□□□ -0.97
HMGB4-203ENST00000519684 FAM110CQ1W6H9 321 aa8.97□□□□□ -0.97
HMGB4-203ENST00000519684 SPRYD7Q5W111 196 aa8.97□□□□□ -0.97
HMGB4-203ENST00000519684 MTHFD1LQ6UB35 978 aa8.97□□□□□ -0.97
HMGB4-203ENST00000519684 JAMLQ86YT9 394 aa8.97□□□□□ -0.97
HMGB4-203ENST00000519684 IFNLR1Q8IU57 520 aaPredicted RBP8.97□□□□□ -0.97
HMGB4-203ENST00000519684 EFCAB13Q8IY85 973 aa8.97□□□□□ -0.97
HMGB4-203ENST00000519684 TMEM35BQ8NCS4 154 aa8.97□□□□□ -0.97
HMGB4-203ENST00000519684 ZNF606Q8WXB4 792 aa8.97□□□□□ -0.97
HMGB4-203ENST00000519684 MAML3Q96JK9 1138 aa8.97□□□□□ -0.97
HMGB4-203ENST00000519684 SH3GL2Q99962 352 aa8.97□□□□□ -0.97
HMGB4-203ENST00000519684 ERP44Q9BS26 406 aa8.97□□□□□ -0.97
HMGB4-203ENST00000519684 TRIM31Q9BZY9 425 aa8.97□□□□□ -0.97
HMGB4-203ENST00000519684 TUT1Q9H6E5 874 aaKnown RBP8.97□□□□□ -0.97
HMGB4-203ENST00000519684 MINDY3Q9H8M7 445 aa8.97□□□□□ -0.97
HMGB4-203ENST00000519684 IFT122Q9HBG6 1241 aa8.97□□□□□ -0.97
HMGB4-203ENST00000519684 LCMT1Q9UIC8 334 aa8.97□□□□□ -0.97
HMGB4-203ENST00000519684 C11orf97A0A1B0GVM6 126 aaPredicted RBP8.97□□□□□ -0.97
HMGB4-203ENST00000519684 ERICH4A6NGS2 130 aa8.97□□□□□ -0.97
HMGB4-203ENST00000519684 SLC15A5A6NIM6 579 aa8.97□□□□□ -0.97
HMGB4-203ENST00000519684 PODXLO00592 558 aa8.97□□□□□ -0.97
HMGB4-203ENST00000519684 MED7O43513 233 aa8.97□□□□□ -0.97
HMGB4-203ENST00000519684 CELF2O95319 508 aaKnown RBP8.97□□□□□ -0.97
HMGB4-203ENST00000519684 VTNP04004 478 aa8.97□□□□□ -0.97
HMGB4-203ENST00000519684 CFHP08603 1231 aa8.97□□□□□ -0.97
HMGB4-203ENST00000519684 STAG3L1P0CL83 205 aa8.97□□□□□ -0.97
HMGB4-203ENST00000519684 SSR1P43307 286 aaKnown RBP8.97□□□□□ -0.97
HMGB4-203ENST00000519684 ACVR2BQ13705 512 aa8.97□□□□□ -0.97
HMGB4-203ENST00000519684 GRIK4Q16099 956 aa8.97□□□□□ -0.97
HMGB4-203ENST00000519684 DGKDQ16760 1214 aa8.97□□□□□ -0.97
HMGB4-203ENST00000519684 DUSP28Q4G0W2 176 aa8.97□□□□□ -0.97
HMGB4-203ENST00000519684 ZNF667Q5HYK9 610 aa8.97□□□□□ -0.97
HMGB4-203ENST00000519684 IQSEC1Q6DN90 963 aa8.97□□□□□ -0.97
HMGB4-203ENST00000519684 CCDC137Q6PK04 289 aaKnown RBP8.97□□□□□ -0.97
HMGB4-203ENST00000519684 APBB1IPQ7Z5R6 666 aaPredicted RBP8.97□□□□□ -0.97
HMGB4-203ENST00000519684 CPNE8Q86YQ8 564 aa8.97□□□□□ -0.97
HMGB4-203ENST00000519684 LINC01465Q8N7H1 131 aa8.97□□□□□ -0.97
HMGB4-203ENST00000519684 PRELID2Q8N945 189 aa8.97□□□□□ -0.97
HMGB4-203ENST00000519684 CEP120Q8N960 986 aa8.97□□□□□ -0.97
HMGB4-203ENST00000519684 SEC14L1Q92503 715 aa8.97□□□□□ -0.97
HMGB4-203ENST00000519684 C18orf8Q96DM3 657 aa8.97□□□□□ -0.97
HMGB4-203ENST00000519684 ADPGKQ9BRR6 497 aa8.97□□□□□ -0.97
HMGB4-203ENST00000519684 TINF2Q9BSI4 451 aa8.97□□□□□ -0.97
HMGB4-203ENST00000519684 C16orf70Q9BSU1 422 aa8.97□□□□□ -0.97
HMGB4-203ENST00000519684 ZNF518BQ9C0D4 1074 aa8.97□□□□□ -0.97
HMGB4-203ENST00000519684 KATNBL1Q9H079 304 aa8.97□□□□□ -0.97
HMGB4-203ENST00000519684 ABHD16BQ9H3Z7 469 aa8.97□□□□□ -0.97
HMGB4-203ENST00000519684 PDZD7Q9H5P4 517 aa8.97□□□□□ -0.97
HMGB4-203ENST00000519684 NXF1Q9UBU9 619 aaKnown RBP8.97□□□□□ -0.97
HMGB4-203ENST00000519684 PARP2Q9UGN5 583 aa8.97□□□□□ -0.97
HMGB4-203ENST00000519684 PCYOX1Q9UHG3 505 aa8.97□□□□□ -0.97
HMGB4-203ENST00000519684 ZNF236Q9UL36 1845 aa8.97□□□□□ -0.97
HMGB4-203ENST00000519684 LACTBL1A8MY62 500 aa8.96□□□□□ -0.97
HMGB4-203ENST00000519684 PSTPIP1O43586 416 aa8.96□□□□□ -0.97
HMGB4-203ENST00000519684 MMP3P08254 477 aa8.96□□□□□ -0.97
HMGB4-203ENST00000519684 WEE2P0C1S8 567 aa8.96□□□□□ -0.97
HMGB4-203ENST00000519684 P4HA1P13674 534 aa8.96□□□□□ -0.97
HMGB4-203ENST00000519684 SMPD1P17405 629 aa8.96□□□□□ -0.97
HMGB4-203ENST00000519684 ECHS1P30084 290 aa8.96□□□□□ -0.97
HMGB4-203ENST00000519684 CETN2P41208 172 aa8.96□□□□□ -0.97
HMGB4-203ENST00000519684 ASPAP45381 313 aa8.96□□□□□ -0.97
HMGB4-203ENST00000519684 FNTAP49354 379 aa8.96□□□□□ -0.97
HMGB4-203ENST00000519684 LACTBP83111 547 aaPredicted RBP8.96□□□□□ -0.97
HMGB4-203ENST00000519684 MAMLD1Q13495 774 aa8.96□□□□□ -0.97
HMGB4-203ENST00000519684 CYP1B1Q16678 543 aa8.96□□□□□ -0.97
HMGB4-203ENST00000519684 ZNF394Q53GI3 561 aa8.96□□□□□ -0.97
HMGB4-203ENST00000519684 C2CD6Q53TS8 623 aa8.96□□□□□ -0.97
HMGB4-203ENST00000519684 PLEKHA7Q6IQ23 1121 aa8.96□□□□□ -0.97
HMGB4-203ENST00000519684 LRIG3Q6UXM1 1119 aa8.96□□□□□ -0.97
HMGB4-203ENST00000519684 LEKR1Q6ZMV7 388 aa8.96□□□□□ -0.97
HMGB4-203ENST00000519684 CCDC50Q8IVM0 306 aa8.96□□□□□ -0.97
HMGB4-203ENST00000519684 RHOT1Q8IXI2 618 aa8.96□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms