RNA–Protein interactions for RNA: ENST00000517138.1

SCARNA1-201, small Cajal body-specific RNA 1, humanhuman

BASIC

Gene SCARNA1, Length 166 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA1-201ENST00000517138 TGM1P22735 817 aa6.79□□□□□ -1.32
SCARNA1-201ENST00000517138 MAP2K6P52564 334 aa6.79□□□□□ -1.32
SCARNA1-201ENST00000517138 PSMC1P62191 440 aaKnown RBP6.79□□□□□ -1.32
SCARNA1-201ENST00000517138 IGBP1P78318 339 aa6.79□□□□□ -1.32
SCARNA1-201ENST00000517138 MXRA7P84157 204 aa6.79□□□□□ -1.32
SCARNA1-201ENST00000517138 NOGQ13253 232 aa6.79□□□□□ -1.32
SCARNA1-201ENST00000517138 OLFML1Q6UWY5 402 aa6.79□□□□□ -1.32
SCARNA1-201ENST00000517138 RAVER1Q8IY67 606 aaKnown RBP6.79□□□□□ -1.32
SCARNA1-201ENST00000517138 C3orf20Q8ND61 904 aa6.79□□□□□ -1.32
SCARNA1-201ENST00000517138 RTFDC1Q9BY42 306 aaPredicted RBP6.79□□□□□ -1.32
SCARNA1-201ENST00000517138 SLAMF7Q9NQ25 335 aa6.79□□□□□ -1.32
SCARNA1-201ENST00000517138 AGAP1Q9UPQ3 857 aa6.79□□□□□ -1.32
SCARNA1-201ENST00000517138 BMP5P22003 454 aa6.78□□□□□ -1.32
SCARNA1-201ENST00000517138 FDXRP22570 491 aa6.78□□□□□ -1.32
SCARNA1-201ENST00000517138 PRDX5P30044 214 aa6.78□□□□□ -1.32
SCARNA1-201ENST00000517138 INHBEP58166 350 aa6.78□□□□□ -1.32
SCARNA1-201ENST00000517138 TAP1Q03518 808 aa6.78□□□□□ -1.32
SCARNA1-201ENST00000517138 SMN1Q16637 294 aaKnown RBP6.78□□□□□ -1.32
SCARNA1-201ENST00000517138 CD300EQ496F6 205 aaPredicted RBP6.78□□□□□ -1.32
SCARNA1-201ENST00000517138 ARMC6Q6NXE6 501 aa6.78□□□□□ -1.32
SCARNA1-201ENST00000517138 CFAP52Q8N1V2 620 aa6.78□□□□□ -1.32
SCARNA1-201ENST00000517138 SSH3Q8TE77 659 aa6.78□□□□□ -1.32
SCARNA1-201ENST00000517138 TMEM125Q96AQ2 219 aa6.78□□□□□ -1.32
SCARNA1-201ENST00000517138 RGMAQ96B86 450 aa6.78□□□□□ -1.32
SCARNA1-201ENST00000517138 PTCD3Q96EY7 689 aaKnown RBP6.78□□□□□ -1.32
SCARNA1-201ENST00000517138 COQ10AQ96MF6 247 aa6.78□□□□□ -1.32
SCARNA1-201ENST00000517138 RHOBTB2Q9BYZ6 727 aa6.78□□□□□ -1.32
SCARNA1-201ENST00000517138 PRDM13Q9H4Q3 707 aa6.78□□□□□ -1.32
SCARNA1-201ENST00000517138 TCF7L1Q9HCS4 588 aa6.78□□□□□ -1.32
SCARNA1-201ENST00000517138 ALG13Q9NP73 1137 aaKnown RBP6.78□□□□□ -1.32
SCARNA1-201ENST00000517138 ABCF2Q9UG63 623 aa6.78□□□□□ -1.32
SCARNA1-201ENST00000517138 ZBTB32Q9Y2Y4 487 aaPredicted RBP6.78□□□□□ -1.32
SCARNA1-201ENST00000517138 COL11A2P13942 1736 aaPredicted RBP6.77□□□□□ -1.33
SCARNA1-201ENST00000517138 SUN1O94901 812 aa6.77□□□□□ -1.33
SCARNA1-201ENST00000517138 LMNAP02545 664 aaKnown RBP6.77□□□□□ -1.33
SCARNA1-201ENST00000517138 FTLP02792 175 aaPredicted RBP6.77□□□□□ -1.33
SCARNA1-201ENST00000517138 GATA3P23771 443 aa6.77□□□□□ -1.33
SCARNA1-201ENST00000517138 PTH2RP49190 550 aa6.77□□□□□ -1.33
SCARNA1-201ENST00000517138 CLK3P49761 638 aaKnown RBP6.77□□□□□ -1.33
SCARNA1-201ENST00000517138 HK3P52790 923 aa6.77□□□□□ -1.33
SCARNA1-201ENST00000517138 ZNF267Q14586 743 aaPredicted RBP6.77□□□□□ -1.33
SCARNA1-201ENST00000517138 HEATR3Q7Z4Q2 680 aa6.77□□□□□ -1.33
SCARNA1-201ENST00000517138 PPP1R3BQ86XI6 285 aa6.77□□□□□ -1.33
SCARNA1-201ENST00000517138 FAM90A1Q86YD7 464 aa6.77□□□□□ -1.33
SCARNA1-201ENST00000517138 SH2D3CQ8N5H7 860 aa6.77□□□□□ -1.33
SCARNA1-201ENST00000517138 MED15Q96RN5 788 aa6.77□□□□□ -1.33
SCARNA1-201ENST00000517138 CASS4Q9NQ75 786 aa6.77□□□□□ -1.33
SCARNA1-201ENST00000517138 TYW1Q9NV66 732 aaKnown RBP6.77□□□□□ -1.33
SCARNA1-201ENST00000517138 MAST3O60307 1309 aa6.76□□□□□ -1.33
SCARNA1-201ENST00000517138 MYADML2A6NDP7 307 aa6.76□□□□□ -1.33
SCARNA1-201ENST00000517138 ZNF785A8K8V0 405 aa6.76□□□□□ -1.33
SCARNA1-201ENST00000517138 OVOL3O00110 214 aa6.76□□□□□ -1.33
SCARNA1-201ENST00000517138 MGST3O14880 152 aa6.76□□□□□ -1.33
SCARNA1-201ENST00000517138 AKAP10O43572 662 aa6.76□□□□□ -1.33
SCARNA1-201ENST00000517138 MATN4O95460 622 aa6.76□□□□□ -1.33
SCARNA1-201ENST00000517138 ESRRBO95718 433 aa6.76□□□□□ -1.33
SCARNA1-201ENST00000517138 AHSGP02765 367 aa6.76□□□□□ -1.33
SCARNA1-201ENST00000517138 RPLP2P05387 115 aaKnown RBP6.76□□□□□ -1.33
SCARNA1-201ENST00000517138 GJB1P08034 283 aa6.76□□□□□ -1.33
SCARNA1-201ENST00000517138 KCNA2P16389 499 aa6.76□□□□□ -1.33
SCARNA1-201ENST00000517138 LPOP22079 712 aaPredicted RBP6.76□□□□□ -1.33
SCARNA1-201ENST00000517138 SMARCA1P28370 1054 aa6.76□□□□□ -1.33
SCARNA1-201ENST00000517138 AVPR1BP47901 424 aa6.76□□□□□ -1.33
SCARNA1-201ENST00000517138 RAB27AP51159 221 aa6.76□□□□□ -1.33
SCARNA1-201ENST00000517138 SF3B3Q15393 1217 aaKnown RBP6.76□□□□□ -1.33
SCARNA1-201ENST00000517138 PGS1Q32NB8 556 aa6.76□□□□□ -1.33
SCARNA1-201ENST00000517138 SLC30A10Q6XR72 485 aa6.76□□□□□ -1.33
SCARNA1-201ENST00000517138 Q6ZNX1 250 aa6.76□□□□□ -1.33
SCARNA1-201ENST00000517138 ZG16BQ96DA0 208 aa6.76□□□□□ -1.33
SCARNA1-201ENST00000517138 MVB12AQ96EY5 273 aa6.76□□□□□ -1.33
SCARNA1-201ENST00000517138 TBCCD1Q9NVR7 557 aa6.76□□□□□ -1.33
SCARNA1-201ENST00000517138 THRAP3Q9Y2W1 955 aaKnown RBP6.76□□□□□ -1.33
SCARNA1-201ENST00000517138 SHROOM4Q9ULL8 1493 aa6.75□□□□□ -1.33
SCARNA1-201ENST00000517138 PRAMEF33A0A0G2JMD5 474 aa6.75□□□□□ -1.33
SCARNA1-201ENST00000517138 A0A1W2PS29 197 aa6.75□□□□□ -1.33
SCARNA1-201ENST00000517138 KIAA0355O15063 1070 aa6.75□□□□□ -1.33
SCARNA1-201ENST00000517138 PRAMEF10O60809 474 aa6.75□□□□□ -1.33
SCARNA1-201ENST00000517138 RHOBTB3O94955 611 aa6.75□□□□□ -1.33
SCARNA1-201ENST00000517138 ALDH2P05091 517 aa6.75□□□□□ -1.33
SCARNA1-201ENST00000517138 NANOS3P60323 173 aaKnown RBP6.75□□□□□ -1.33
SCARNA1-201ENST00000517138 MPP3Q13368 585 aa6.75□□□□□ -1.33
SCARNA1-201ENST00000517138 TAPT1Q6NXT6 567 aa6.75□□□□□ -1.33
SCARNA1-201ENST00000517138 TSHZ1Q6ZSZ6 1077 aa6.75□□□□□ -1.33
SCARNA1-201ENST00000517138 TMPRSS9Q7Z410 1059 aa6.75□□□□□ -1.33
SCARNA1-201ENST00000517138 TPH2Q8IWU9 490 aa6.75□□□□□ -1.33
SCARNA1-201ENST00000517138 CELF5Q8N6W0 485 aaKnown RBP6.75□□□□□ -1.33
SCARNA1-201ENST00000517138 HPS3Q969F9 1004 aa6.75□□□□□ -1.33
SCARNA1-201ENST00000517138 AIFM2Q9BRQ8 373 aa6.75□□□□□ -1.33
SCARNA1-201ENST00000517138 BRD9Q9H8M2 597 aa6.75□□□□□ -1.33
SCARNA1-201ENST00000517138 MAN1C1Q9NR34 630 aa6.75□□□□□ -1.33
SCARNA1-201ENST00000517138 ANKRD6Q9Y2G4 727 aa6.75□□□□□ -1.33
SCARNA1-201ENST00000517138 PCDHA1Q9Y5I3 950 aa6.75□□□□□ -1.33
SCARNA1-201ENST00000517138 TRGV11A0A075B6L2 103 aa6.74□□□□□ -1.33
SCARNA1-201ENST00000517138 DTNBO60941 627 aa6.74□□□□□ -1.33
SCARNA1-201ENST00000517138 PIK3CGP48736 1102 aa6.74□□□□□ -1.33
SCARNA1-201ENST00000517138 PURAQ00577 322 aaKnown RBP6.74□□□□□ -1.33
SCARNA1-201ENST00000517138 ZNF844Q08AG5 666 aa6.74□□□□□ -1.33
SCARNA1-201ENST00000517138 PIN1Q13526 163 aaPredicted RBP6.74□□□□□ -1.33
SCARNA1-201ENST00000517138 GRAMD1CQ8IYS0 662 aa6.74□□□□□ -1.33
SCARNA1-201ENST00000517138 ADGRG5Q8IZF4 528 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms