RNA–Protein interactions for RNA: ENST00000516847.1

RN7SKP88-201, Transcript of RNA, 7SK small nuclear pseudogene 88, humanhuman

BASIC

Gene RN7SKP88, Length 250 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP88-201ENST00000516847 PRDM7Q9NQW5 492 aa1.55□□□□□ -2.16
RN7SKP88-201ENST00000516847 ITM2CQ9NQX7 267 aa1.55□□□□□ -2.16
RN7SKP88-201ENST00000516847 TLR9Q9NR96 1032 aa1.55□□□□□ -2.16
RN7SKP88-201ENST00000516847 ST6GALNAC1Q9NSC7 600 aaPredicted RBP1.55□□□□□ -2.16
RN7SKP88-201ENST00000516847 SACM1LQ9NTJ5 587 aa1.55□□□□□ -2.16
RN7SKP88-201ENST00000516847 TBC1D22BQ9NU19 505 aa1.55□□□□□ -2.16
RN7SKP88-201ENST00000516847 MBNL3Q9NUK0 354 aaKnown RBP1.55□□□□□ -2.16
RN7SKP88-201ENST00000516847 RGL1Q9NZL6 768 aa1.55□□□□□ -2.16
RN7SKP88-201ENST00000516847 JKAMPQ9P055 326 aa1.55□□□□□ -2.16
RN7SKP88-201ENST00000516847 LRFN1Q9P244 771 aa1.55□□□□□ -2.16
RN7SKP88-201ENST00000516847 RBPJLQ9UBG7 517 aa1.55□□□□□ -2.16
RN7SKP88-201ENST00000516847 ZNF212Q9UDV6 495 aa1.55□□□□□ -2.16
RN7SKP88-201ENST00000516847 CPA4Q9UI42 421 aa1.55□□□□□ -2.16
RN7SKP88-201ENST00000516847 HERC5Q9UII4 1024 aaKnown RBP1.55□□□□□ -2.16
RN7SKP88-201ENST00000516847 AJAP1Q9UKB5 411 aaPredicted RBP1.55□□□□□ -2.16
RN7SKP88-201ENST00000516847 ADAMTS6Q9UKP5 1117 aa1.55□□□□□ -2.16
RN7SKP88-201ENST00000516847 HDAC9Q9UKV0 1011 aa1.55□□□□□ -2.16
RN7SKP88-201ENST00000516847 PCDHA6Q9UN73 950 aa1.55□□□□□ -2.16
RN7SKP88-201ENST00000516847 MAN2B2Q9Y2E5 1009 aa1.55□□□□□ -2.16
RN7SKP88-201ENST00000516847 RABGAP1Q9Y3P9 1069 aa1.55□□□□□ -2.16
RN7SKP88-201ENST00000516847 PLEKHM1Q9Y4G2 1056 aa1.55□□□□□ -2.16
RN7SKP88-201ENST00000516847 CTDP1Q9Y5B0 961 aaPredicted RBP1.55□□□□□ -2.16
RN7SKP88-201ENST00000516847 PCDHA1Q9Y5I3 950 aa1.55□□□□□ -2.16
RN7SKP88-201ENST00000516847 HCFC2Q9Y5Z7 792 aa1.55□□□□□ -2.16
RN7SKP88-201ENST00000516847 SLC4A7Q9Y6M7 1214 aa1.55□□□□□ -2.16
RN7SKP88-201ENST00000516847 ATRNL1Q5VV63 1379 aa1.55□□□□□ -2.16
RN7SKP88-201ENST00000516847 SETD1BQ9UPS6 1966 aaKnown RBP1.54□□□□□ -2.16
RN7SKP88-201ENST00000516847 A0A087WZ62 844 aa1.54□□□□□ -2.16
RN7SKP88-201ENST00000516847 A0A087X0M5 115 aa1.54□□□□□ -2.16
RN7SKP88-201ENST00000516847 A0A1B0GX30 115 aa1.54□□□□□ -2.16
RN7SKP88-201ENST00000516847 FAM234BA2RU67 622 aa1.54□□□□□ -2.16
RN7SKP88-201ENST00000516847 PMS2P1A4D2B8 440 aa1.54□□□□□ -2.16
RN7SKP88-201ENST00000516847 OR2W5A6NFC9 320 aa1.54□□□□□ -2.16
RN7SKP88-201ENST00000516847 PRSS29PA6NIE9 313 aa1.54□□□□□ -2.16
RN7SKP88-201ENST00000516847 IPO5O00410 1097 aaKnown RBP1.54□□□□□ -2.16
RN7SKP88-201ENST00000516847 TRIM38O00635 465 aa1.54□□□□□ -2.16
RN7SKP88-201ENST00000516847 GRM6O15303 877 aa1.54□□□□□ -2.16
RN7SKP88-201ENST00000516847 ZNF500O60304 480 aaPredicted RBP1.54□□□□□ -2.16
RN7SKP88-201ENST00000516847 PEX10O60683 326 aa1.54□□□□□ -2.16
RN7SKP88-201ENST00000516847 SOAT2O75908 522 aa1.54□□□□□ -2.16
RN7SKP88-201ENST00000516847 DNAJB5O75953 348 aa1.54□□□□□ -2.16
RN7SKP88-201ENST00000516847 TMEM63AO94886 807 aa1.54□□□□□ -2.16
RN7SKP88-201ENST00000516847 MED26O95402 600 aa1.54□□□□□ -2.16
RN7SKP88-201ENST00000516847 AHSGP02765 367 aa1.54□□□□□ -2.16
RN7SKP88-201ENST00000516847 HMGCRP04035 888 aa1.54□□□□□ -2.16
RN7SKP88-201ENST00000516847 A1BGP04217 495 aa1.54□□□□□ -2.16
RN7SKP88-201ENST00000516847 RNASE1P07998 156 aaKnown RBP1.54□□□□□ -2.16
RN7SKP88-201ENST00000516847 SNRPA1P09661 255 aaKnown RBP1.54□□□□□ -2.16
RN7SKP88-201ENST00000516847 VSIG10L2P0DP72 767 aa1.54□□□□□ -2.16
RN7SKP88-201ENST00000516847 CYP2C9P11712 490 aa1.54□□□□□ -2.16
RN7SKP88-201ENST00000516847 CKMT1AP12532 417 aa1.54□□□□□ -2.16
RN7SKP88-201ENST00000516847 XRCC6P12956 609 aaKnown RBP eCLIP1.54□□□□□ -2.16
RN7SKP88-201ENST00000516847 ALAS1P13196 640 aa1.54□□□□□ -2.16
RN7SKP88-201ENST00000516847 NPPBP16860 134 aa1.54□□□□□ -2.16
RN7SKP88-201ENST00000516847 PFKLP17858 780 aa1.54□□□□□ -2.16
RN7SKP88-201ENST00000516847 XBP1P17861 261 aa1.54□□□□□ -2.16
RN7SKP88-201ENST00000516847 FPR1P21462 350 aa1.54□□□□□ -2.16
RN7SKP88-201ENST00000516847 SDHBP21912 280 aa1.54□□□□□ -2.16
RN7SKP88-201ENST00000516847 RPS6KB1P23443 525 aa1.54□□□□□ -2.16
RN7SKP88-201ENST00000516847 IGFBP6P24592 240 aaPredicted RBP1.54□□□□□ -2.16
RN7SKP88-201ENST00000516847 ACVR2AP27037 513 aa1.54□□□□□ -2.16
RN7SKP88-201ENST00000516847 SLC5A2P31639 672 aa1.54□□□□□ -2.16
RN7SKP88-201ENST00000516847 TRHRP34981 398 aaPredicted RBP1.54□□□□□ -2.16
RN7SKP88-201ENST00000516847 KRT9P35527 623 aa1.54□□□□□ -2.16
RN7SKP88-201ENST00000516847 ADD2P35612 726 aa1.54□□□□□ -2.16
RN7SKP88-201ENST00000516847 ADCY8P40145 1251 aa1.54□□□□□ -2.16
RN7SKP88-201ENST00000516847 VIPR2P41587 438 aa1.54□□□□□ -2.16
RN7SKP88-201ENST00000516847 ALDH1A3P47895 512 aa1.54□□□□□ -2.16
RN7SKP88-201ENST00000516847 GLRBP48167 497 aa1.54□□□□□ -2.16
RN7SKP88-201ENST00000516847 KCNJ5P48544 419 aa1.54□□□□□ -2.16
RN7SKP88-201ENST00000516847 SLC11A2P49281 568 aa1.54□□□□□ -2.16
RN7SKP88-201ENST00000516847 MCM2P49736 904 aa1.54□□□□□ -2.16
RN7SKP88-201ENST00000516847 GSK3AP49840 483 aa1.54□□□□□ -2.16
RN7SKP88-201ENST00000516847 MEOX1P50221 254 aa1.54□□□□□ -2.16
RN7SKP88-201ENST00000516847 CDK7P50613 346 aa1.54□□□□□ -2.16
RN7SKP88-201ENST00000516847 NAP1L1P55209 391 aaKnown RBP1.54□□□□□ -2.16
RN7SKP88-201ENST00000516847 CAP1Q01518 475 aa1.54□□□□□ -2.16
RN7SKP88-201ENST00000516847 POU5F1Q01860 360 aaKnown RBP1.54□□□□□ -2.16
RN7SKP88-201ENST00000516847 CREMQ03060 361 aa1.54□□□□□ -2.16
RN7SKP88-201ENST00000516847 PTH1RQ03431 593 aa1.54□□□□□ -2.16
RN7SKP88-201ENST00000516847 EXOSC9Q06265 439 aaKnown RBP1.54□□□□□ -2.16
RN7SKP88-201ENST00000516847 NSUN2Q08J23 767 aaKnown RBP eCLIP1.54□□□□□ -2.16
RN7SKP88-201ENST00000516847 G3BP1Q13283 466 aaKnown RBP eCLIP1.54□□□□□ -2.16
RN7SKP88-201ENST00000516847 CTBP1Q13363 440 aa1.54□□□□□ -2.16
RN7SKP88-201ENST00000516847 SMAD4Q13485 552 aaKnown RBP1.54□□□□□ -2.16
RN7SKP88-201ENST00000516847 DOC2BQ14184 412 aa1.54□□□□□ -2.16
RN7SKP88-201ENST00000516847 RTP5Q14D33 572 aa1.54□□□□□ -2.16
RN7SKP88-201ENST00000516847 PLCL1Q15111 1095 aa1.54□□□□□ -2.16
RN7SKP88-201ENST00000516847 FAM110CQ1W6H9 321 aa1.54□□□□□ -2.16
RN7SKP88-201ENST00000516847 SLC5A9Q2M3M2 681 aa1.54□□□□□ -2.16
RN7SKP88-201ENST00000516847 NBPF8Q3BBV2 869 aa1.54□□□□□ -2.16
RN7SKP88-201ENST00000516847 FAM47AQ5JRC9 791 aa1.54□□□□□ -2.16
RN7SKP88-201ENST00000516847 PRR31Q5SQ13 230 aa1.54□□□□□ -2.16
RN7SKP88-201ENST00000516847 PRAMEF14Q5SWL7 426 aa1.54□□□□□ -2.16
RN7SKP88-201ENST00000516847 VPS53Q5VIR6 699 aa1.54□□□□□ -2.16
RN7SKP88-201ENST00000516847 MRNIPQ6NTE8 343 aa1.54□□□□□ -2.16
RN7SKP88-201ENST00000516847 JMJD6Q6NYC1 403 aaPredicted RBP1.54□□□□□ -2.16
RN7SKP88-201ENST00000516847 FAM180BQ6P0A1 224 aa1.54□□□□□ -2.16
RN7SKP88-201ENST00000516847 C4orf50Q6ZRC1 276 aa1.54□□□□□ -2.16
RN7SKP88-201ENST00000516847 KIAA0408Q6ZU52 694 aa1.54□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms