RNA–Protein interactions for RNA: ENST00000513989.5

NEDD9-214, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 4

Gene NEDD9, Length 587 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-214ENST00000513989 PIRO00625 290 aa10.92□□□□□ -0.66
NEDD9-214ENST00000513989 ZC3H11AO75152 810 aaKnown RBP eCLIP10.92□□□□□ -0.66
NEDD9-214ENST00000513989 B3GAT3O94766 335 aa10.92□□□□□ -0.66
NEDD9-214ENST00000513989 ITGB3P05106 788 aa10.92□□□□□ -0.66
NEDD9-214ENST00000513989 LINC00271P0C7V0 271 aa10.92□□□□□ -0.66
NEDD9-214ENST00000513989 POLR2BP30876 1174 aaKnown RBP10.92□□□□□ -0.66
NEDD9-214ENST00000513989 GATMP50440 423 aa10.92□□□□□ -0.66
NEDD9-214ENST00000513989 AFF1P51825 1210 aaKnown RBP10.92□□□□□ -0.66
NEDD9-214ENST00000513989 KRT17Q04695 432 aa10.92□□□□□ -0.66
NEDD9-214ENST00000513989 ELAVL2Q12926 359 aaKnown RBP10.92□□□□□ -0.66
NEDD9-214ENST00000513989 GSE1Q14687 1217 aa10.92□□□□□ -0.66
NEDD9-214ENST00000513989 BMS1Q14692 1282 aaKnown RBP10.92□□□□□ -0.66
NEDD9-214ENST00000513989 NR1I3Q14994 352 aa10.92□□□□□ -0.66
NEDD9-214ENST00000513989 UPP1Q16831 310 aa10.92□□□□□ -0.66
NEDD9-214ENST00000513989 C1orf220Q5T0J3 134 aa10.92□□□□□ -0.66
NEDD9-214ENST00000513989 TDRD10Q5VZ19 366 aaKnown RBP10.92□□□□□ -0.66
NEDD9-214ENST00000513989 C9orf57Q5W0N0 161 aa10.92□□□□□ -0.66
NEDD9-214ENST00000513989 SARM1Q6SZW1 724 aa10.92□□□□□ -0.66
NEDD9-214ENST00000513989 ZNF280BQ86YH2 543 aa10.92□□□□□ -0.66
NEDD9-214ENST00000513989 COLGALT2Q8IYK4 626 aa10.92□□□□□ -0.66
NEDD9-214ENST00000513989 LRRC52Q8N7C0 313 aa10.92□□□□□ -0.66
NEDD9-214ENST00000513989 C1orf127Q8N9H9 656 aa10.92□□□□□ -0.66
NEDD9-214ENST00000513989 HPDLQ96IR7 371 aa10.92□□□□□ -0.66
NEDD9-214ENST00000513989 FAXDC2Q96IV6 333 aa10.92□□□□□ -0.66
NEDD9-214ENST00000513989 ZNF558Q96NG5 402 aa10.92□□□□□ -0.66
NEDD9-214ENST00000513989 TGS1Q96RS0 853 aaKnown RBP10.92□□□□□ -0.66
NEDD9-214ENST00000513989 C17orf80Q9BSJ5 609 aa10.92□□□□□ -0.66
NEDD9-214ENST00000513989 NRDE2Q9H7Z3 1164 aa10.92□□□□□ -0.66
NEDD9-214ENST00000513989 RTN4Q9NQC3 1192 aaKnown RBP10.92□□□□□ -0.66
NEDD9-214ENST00000513989 LMCD1Q9NZU5 365 aa10.92□□□□□ -0.66
NEDD9-214ENST00000513989 IFNKQ9P0W0 207 aa10.92□□□□□ -0.66
NEDD9-214ENST00000513989 TUBGCP4Q9UGJ1 667 aa10.92□□□□□ -0.66
NEDD9-214ENST00000513989 COG5Q9UP83 839 aa10.92□□□□□ -0.66
NEDD9-214ENST00000513989 COQ4Q9Y3A0 265 aa10.92□□□□□ -0.66
NEDD9-214ENST00000513989 PIEZO1Q92508 2521 aa10.92□□□□□ -0.66
NEDD9-214ENST00000513989 MYH11P35749 1972 aa10.92□□□□□ -0.66
NEDD9-214ENST00000513989 ZNF318Q5VUA4 2279 aa10.91□□□□□ -0.66
NEDD9-214ENST00000513989 ANO9A1A5B4 782 aa10.91□□□□□ -0.66
NEDD9-214ENST00000513989 MEFVO15553 781 aaPredicted RBP10.91□□□□□ -0.66
NEDD9-214ENST00000513989 ABCB7O75027 752 aa10.91□□□□□ -0.66
NEDD9-214ENST00000513989 DDHD2O94830 711 aa10.91□□□□□ -0.66
NEDD9-214ENST00000513989 HLA-DRAP01903 254 aa10.91□□□□□ -0.66
NEDD9-214ENST00000513989 GALTP07902 379 aa10.91□□□□□ -0.66
NEDD9-214ENST00000513989 PPM1AP35813 382 aa10.91□□□□□ -0.66
NEDD9-214ENST00000513989 TAF6P49848 677 aa10.91□□□□□ -0.66
NEDD9-214ENST00000513989 MRE11P49959 708 aa10.91□□□□□ -0.66
NEDD9-214ENST00000513989 CLCNKBP51801 687 aa10.91□□□□□ -0.66
NEDD9-214ENST00000513989 WNT7BP56706 349 aa10.91□□□□□ -0.66
NEDD9-214ENST00000513989 BCAR1P56945 870 aa10.91□□□□□ -0.66
NEDD9-214ENST00000513989 DSC1Q08554 894 aa10.91□□□□□ -0.66
NEDD9-214ENST00000513989 AAK1Q2M2I8 961 aa10.91□□□□□ -0.66
NEDD9-214ENST00000513989 SV2CQ496J9 727 aa10.91□□□□□ -0.66
NEDD9-214ENST00000513989 CBWD6Q4V339 395 aa10.91□□□□□ -0.66
NEDD9-214ENST00000513989 CBWD3Q5JTY5 395 aa10.91□□□□□ -0.66
NEDD9-214ENST00000513989 MIIPQ5JXC2 388 aa10.91□□□□□ -0.66
NEDD9-214ENST00000513989 CBWD5Q5RIA9 395 aa10.91□□□□□ -0.66
NEDD9-214ENST00000513989 C15orf39Q6ZRI6 1047 aa10.91□□□□□ -0.66
NEDD9-214ENST00000513989 TTC39CQ8N584 583 aa10.91□□□□□ -0.66
NEDD9-214ENST00000513989 TAS1R2Q8TE23 839 aa10.91□□□□□ -0.66
NEDD9-214ENST00000513989 HLA-CQ95604 372 aa10.91□□□□□ -0.66
NEDD9-214ENST00000513989 NAP1L5Q96NT1 182 aaPredicted RBP10.91□□□□□ -0.66
NEDD9-214ENST00000513989 SAMD11Q96NU1 681 aa10.91□□□□□ -0.66
NEDD9-214ENST00000513989 CD320Q9NPF0 282 aa10.91□□□□□ -0.66
NEDD9-214ENST00000513989 SPG21Q9NZD8 308 aa10.91□□□□□ -0.66
NEDD9-214ENST00000513989 GCNT4Q9P109 453 aa10.91□□□□□ -0.66
NEDD9-214ENST00000513989 PUF60Q9UHX1 559 aaKnown RBP10.91□□□□□ -0.66
NEDD9-214ENST00000513989 DSEQ9UL01 958 aa10.91□□□□□ -0.66
NEDD9-214ENST00000513989 PLAGL2Q9UPG8 496 aa10.91□□□□□ -0.66
NEDD9-214ENST00000513989 DAAM1Q9Y4D1 1078 aa10.91□□□□□ -0.66
NEDD9-214ENST00000513989 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.9□□□□□ -0.66
NEDD9-214ENST00000513989 KPNA7A9QM74 516 aa10.9□□□□□ -0.66
NEDD9-214ENST00000513989 NRP1O14786 923 aa10.9□□□□□ -0.66
NEDD9-214ENST00000513989 HUS1O60921 280 aa10.9□□□□□ -0.66
NEDD9-214ENST00000513989 STAU1O95793 577 aaKnown RBP10.9□□□□□ -0.66
NEDD9-214ENST00000513989 CST3P01034 146 aaPredicted RBP10.9□□□□□ -0.66
NEDD9-214ENST00000513989 TPM1P09493 284 aa10.9□□□□□ -0.66
NEDD9-214ENST00000513989 FAM163BP0C2L3 166 aa10.9□□□□□ -0.66
NEDD9-214ENST00000513989 ATXN8OSP0DMR3 200 aa10.9□□□□□ -0.66
NEDD9-214ENST00000513989 TRIM21P19474 475 aaKnown RBP10.9□□□□□ -0.66
NEDD9-214ENST00000513989 LILRA4P59901 499 aa10.9□□□□□ -0.66
NEDD9-214ENST00000513989 YWHAEP62258 255 aaKnown RBP10.9□□□□□ -0.66
NEDD9-214ENST00000513989 TNNC1P63316 161 aa10.9□□□□□ -0.66
NEDD9-214ENST00000513989 NAB2Q15742 525 aa10.9□□□□□ -0.66
NEDD9-214ENST00000513989 ZNF699Q32M78 642 aa10.9□□□□□ -0.66
NEDD9-214ENST00000513989 WDR72Q3MJ13 1102 aa10.9□□□□□ -0.66
NEDD9-214ENST00000513989 ZNF667Q5HYK9 610 aa10.9□□□□□ -0.66
NEDD9-214ENST00000513989 KCNT2Q6UVM3 1135 aa10.9□□□□□ -0.66
NEDD9-214ENST00000513989 DSTYKQ6XUX3 929 aa10.9□□□□□ -0.66
NEDD9-214ENST00000513989 ENOSF1Q7L5Y1 443 aa10.9□□□□□ -0.66
NEDD9-214ENST00000513989 METTL23Q86XA0 190 aa10.9□□□□□ -0.66
NEDD9-214ENST00000513989 APPL2Q8NEU8 664 aa10.9□□□□□ -0.66
NEDD9-214ENST00000513989 CLP1Q92989 425 aaKnown RBP10.9□□□□□ -0.66
NEDD9-214ENST00000513989 IQCDQ96DY2 449 aa10.9□□□□□ -0.66
NEDD9-214ENST00000513989 TMEM169Q96HH4 297 aa10.9□□□□□ -0.66
NEDD9-214ENST00000513989 NT5C1BQ96P26 610 aa10.9□□□□□ -0.66
NEDD9-214ENST00000513989 MMS19Q96T76 1030 aa10.9□□□□□ -0.66
NEDD9-214ENST00000513989 CRACR2AQ9BSW2 395 aa10.9□□□□□ -0.66
NEDD9-214ENST00000513989 NUP58Q9BVL2 599 aa10.9□□□□□ -0.66
NEDD9-214ENST00000513989 PLVAPQ9BX97 442 aa10.9□□□□□ -0.66
NEDD9-214ENST00000513989 INTS2Q9H0H0 1204 aaKnown RBP10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms