RNA–Protein interactions for RNA: ENST00000513960.5

VCAN-210, Transcript of versican, humanhuman

TSL 1 (best)

Gene VCAN, Length 3,973 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-210ENST00000513960 DAB2IPQ5VWQ8 1189 aa10.22□□□□□ -0.77
VCAN-210ENST00000513960 NLRP9Q7RTR0 991 aa10.22□□□□□ -0.77
VCAN-210ENST00000513960 SLFN11Q7Z7L1 901 aa10.22□□□□□ -0.77
VCAN-210ENST00000513960 CCNJLQ8IV13 435 aa10.22□□□□□ -0.77
VCAN-210ENST00000513960 ZNF341Q9BYN7 854 aa10.22□□□□□ -0.77
VCAN-210ENST00000513960 HOMER2Q9NSB8 354 aa10.22□□□□□ -0.77
VCAN-210ENST00000513960 ANAPC7Q9UJX3 599 aa10.22□□□□□ -0.77
VCAN-210ENST00000513960 TTC4O95801 387 aa10.21□□□□□ -0.77
VCAN-210ENST00000513960 CTNNA2P26232 953 aa10.21□□□□□ -0.77
VCAN-210ENST00000513960 POU5F1Q01860 360 aaKnown RBP10.21□□□□□ -0.77
VCAN-210ENST00000513960 MGAT5Q09328 741 aa10.21□□□□□ -0.77
VCAN-210ENST00000513960 ALCAMQ13740 583 aa10.21□□□□□ -0.77
VCAN-210ENST00000513960 KPNB1Q14974 876 aaKnown RBP10.21□□□□□ -0.77
VCAN-210ENST00000513960 ACCSQ96QU6 501 aa10.21□□□□□ -0.77
VCAN-210ENST00000513960 GLIS2Q9BZE0 524 aaPredicted RBP10.21□□□□□ -0.77
VCAN-210ENST00000513960 DMAC2Q9NW81 257 aa10.21□□□□□ -0.77
VCAN-210ENST00000513960 NINJ2Q9NZG7 142 aa10.21□□□□□ -0.77
VCAN-210ENST00000513960 ZNF148Q9UQR1 794 aa10.21□□□□□ -0.77
VCAN-210ENST00000513960 SMCHD1A6NHR9 2005 aa10.21□□□□□ -0.77
VCAN-210ENST00000513960 CYP26A1O43174 497 aa10.21□□□□□ -0.78
VCAN-210ENST00000513960 ICAM1P05362 532 aa10.21□□□□□ -0.78
VCAN-210ENST00000513960 TAC1P20366 129 aa10.21□□□□□ -0.78
VCAN-210ENST00000513960 THOC5Q13769 683 aaKnown RBP10.21□□□□□ -0.78
VCAN-210ENST00000513960 KIFAP3Q92845 792 aa10.21□□□□□ -0.78
VCAN-210ENST00000513960 FIZ1Q96SL8 496 aa10.21□□□□□ -0.78
VCAN-210ENST00000513960 STK32BQ9NY57 414 aa10.21□□□□□ -0.78
VCAN-210ENST00000513960 CHKBQ9Y259 395 aa10.21□□□□□ -0.78
VCAN-210ENST00000513960 PFDN1O60925 122 aa10.21□□□□□ -0.78
VCAN-210ENST00000513960 ZBED4O75132 1171 aa10.21□□□□□ -0.78
VCAN-210ENST00000513960 GJB6O95452 261 aa10.21□□□□□ -0.78
VCAN-210ENST00000513960 CALCAP01258 141 aa10.21□□□□□ -0.78
VCAN-210ENST00000513960 ITGB5P18084 799 aa10.21□□□□□ -0.78
VCAN-210ENST00000513960 ARHGAP22Q7Z5H3 698 aa10.21□□□□□ -0.78
VCAN-210ENST00000513960 ANKMY2Q8IV38 441 aa10.21□□□□□ -0.78
VCAN-210ENST00000513960 CDAN1Q8IWY9 1227 aa10.21□□□□□ -0.78
VCAN-210ENST00000513960 RBBP8NLQ8NC74 664 aaPredicted RBP10.21□□□□□ -0.78
VCAN-210ENST00000513960 MAML1Q92585 1016 aa10.21□□□□□ -0.78
VCAN-210ENST00000513960 KAT5Q92993 513 aa10.21□□□□□ -0.78
VCAN-210ENST00000513960 ABTB1Q969K4 478 aaPredicted RBP10.21□□□□□ -0.78
VCAN-210ENST00000513960 GRAMD1AQ96CP6 724 aa10.21□□□□□ -0.78
VCAN-210ENST00000513960 RBM15Q96T37 977 aaKnown RBP eCLIP10.21□□□□□ -0.78
VCAN-210ENST00000513960 ATP8B3O60423 1300 aa10.2□□□□□ -0.78
VCAN-210ENST00000513960 EMSYQ7Z589 1322 aa10.2□□□□□ -0.78
VCAN-210ENST00000513960 CREB3O43889 395 aa10.2□□□□□ -0.78
VCAN-210ENST00000513960 TBC1D12O60347 775 aa10.2□□□□□ -0.78
VCAN-210ENST00000513960 CIB2O75838 187 aa10.2□□□□□ -0.78
VCAN-210ENST00000513960 RFX1P22670 979 aa10.2□□□□□ -0.78
VCAN-210ENST00000513960 QARSP47897 775 aaKnown RBP10.2□□□□□ -0.78
VCAN-210ENST00000513960 MYBPC2Q14324 1141 aa10.2□□□□□ -0.78
VCAN-210ENST00000513960 GALNTL6Q49A17 601 aa10.2□□□□□ -0.78
VCAN-210ENST00000513960 KHDC1Q4VXA5 237 aaKnown RBP10.2□□□□□ -0.78
VCAN-210ENST00000513960 LVRNQ6Q4G3 990 aa10.2□□□□□ -0.78
VCAN-210ENST00000513960 CEP128Q6ZU80 1094 aa10.2□□□□□ -0.78
VCAN-210ENST00000513960 SLC9A9Q8IVB4 645 aa10.2□□□□□ -0.78
VCAN-210ENST00000513960 EZH1Q92800 747 aaPredicted RBP10.2□□□□□ -0.78
VCAN-210ENST00000513960 UTP4Q969X6 686 aaKnown RBP10.2□□□□□ -0.78
VCAN-210ENST00000513960 SH2D3AQ9BRG2 576 aa10.2□□□□□ -0.78
VCAN-210ENST00000513960 RHBDL2Q9NX52 303 aa10.2□□□□□ -0.78
VCAN-210ENST00000513960 ARHGAP42A6NI28 874 aa10.2□□□□□ -0.78
VCAN-210ENST00000513960 ALADP13716 330 aa10.2□□□□□ -0.78
VCAN-210ENST00000513960 VAMP7P51809 220 aa10.2□□□□□ -0.78
VCAN-210ENST00000513960 INHBEP58166 350 aa10.2□□□□□ -0.78
VCAN-210ENST00000513960 MTMR1Q13613 665 aa10.2□□□□□ -0.78
VCAN-210ENST00000513960 FKBP1CQ5VVH2 108 aa10.2□□□□□ -0.78
VCAN-210ENST00000513960 ZNF772Q68DY9 489 aaPredicted RBP10.2□□□□□ -0.78
VCAN-210ENST00000513960 PHLDB3Q6NSJ2 640 aa10.2□□□□□ -0.78
VCAN-210ENST00000513960 NIM1KQ8IY84 436 aa10.2□□□□□ -0.78
VCAN-210ENST00000513960 MAIP1Q8WWC4 291 aa10.2□□□□□ -0.78
VCAN-210ENST00000513960 TTC17Q96AE7 1141 aa10.2□□□□□ -0.78
VCAN-210ENST00000513960 TXLNGYQ9BZA5 131 aa10.2□□□□□ -0.78
VCAN-210ENST00000513960 IQCGQ9H095 443 aaKnown RBP10.2□□□□□ -0.78
VCAN-210ENST00000513960 C12orf65Q9H3J6 166 aaKnown RBP10.2□□□□□ -0.78
VCAN-210ENST00000513960 DCLRE1BQ9H816 532 aa10.2□□□□□ -0.78
VCAN-210ENST00000513960 ZHX2Q9Y6X8 837 aa10.2□□□□□ -0.78
VCAN-210ENST00000513960 NFIBO00712 420 aa10.2□□□□□ -0.78
VCAN-210ENST00000513960 LIN7AO14910 233 aaPredicted RBP10.2□□□□□ -0.78
VCAN-210ENST00000513960 SGPL1O95470 568 aa10.2□□□□□ -0.78
VCAN-210ENST00000513960 MYCLP12524 364 aaPredicted RBP10.2□□□□□ -0.78
VCAN-210ENST00000513960 DEUP1Q05D60 604 aa10.2□□□□□ -0.78
VCAN-210ENST00000513960 FAM83AQ86UY5 434 aa10.2□□□□□ -0.78
VCAN-210ENST00000513960 JDP2Q8WYK2 163 aa10.2□□□□□ -0.78
VCAN-210ENST00000513960 ART4Q93070 314 aa10.2□□□□□ -0.78
VCAN-210ENST00000513960 VTI1AQ96AJ9 217 aa10.2□□□□□ -0.78
VCAN-210ENST00000513960 IKBKGQ9Y6K9 419 aa10.2□□□□□ -0.78
VCAN-210ENST00000513960 A6NHS1 94 aa10.19□□□□□ -0.78
VCAN-210ENST00000513960 HSD17B4P51659 736 aa10.19□□□□□ -0.78
VCAN-210ENST00000513960 PKN2Q16513 984 aaKnown RBP10.19□□□□□ -0.78
VCAN-210ENST00000513960 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.19□□□□□ -0.78
VCAN-210ENST00000513960 SPDYCQ5MJ68 293 aa10.19□□□□□ -0.78
VCAN-210ENST00000513960 RNF43Q68DV7 783 aa10.19□□□□□ -0.78
VCAN-210ENST00000513960 DSTYKQ6XUX3 929 aa10.19□□□□□ -0.78
VCAN-210ENST00000513960 CYFIP1Q7L576 1253 aa10.19□□□□□ -0.78
VCAN-210ENST00000513960 ZBED8Q8IZ13 594 aa10.19□□□□□ -0.78
VCAN-210ENST00000513960 XXYLT1Q8NBI6 393 aa10.19□□□□□ -0.78
VCAN-210ENST00000513960 GRK7Q8WTQ7 553 aa10.19□□□□□ -0.78
VCAN-210ENST00000513960 IWS1Q96ST2 819 aa10.19□□□□□ -0.78
VCAN-210ENST00000513960 WNT8AQ9H1J5 351 aa10.19□□□□□ -0.78
VCAN-210ENST00000513960 HEY2Q9UBP5 337 aa10.19□□□□□ -0.78
VCAN-210ENST00000513960 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.19□□□□□ -0.78
VCAN-210ENST00000513960 CNTNAP1P78357 1384 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms