RNA–Protein interactions for RNA: ENST00000510737.1

USP53-206, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 5

Gene USP53, Length 534 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-206ENST00000510737 ATP13A4Q4VNC1 1196 aa8.96□□□□□ -0.98
USP53-206ENST00000510737 PRR16Q569H4 304 aa8.96□□□□□ -0.98
USP53-206ENST00000510737 ZNF480Q8WV37 535 aa8.96□□□□□ -0.98
USP53-206ENST00000510737 COL14A1Q05707 1796 aaKnown RBP8.96□□□□□ -0.98
USP53-206ENST00000510737 RRBP1Q9P2E9 1410 aaKnown RBP8.96□□□□□ -0.98
USP53-206ENST00000510737 CXorf49A8MYA2 514 aaPredicted RBP8.95□□□□□ -0.98
USP53-206ENST00000510737 CRHR1P34998 444 aa8.95□□□□□ -0.98
USP53-206ENST00000510737 PRELPP51888 382 aa8.95□□□□□ -0.98
USP53-206ENST00000510737 SLC15A2Q16348 729 aa8.95□□□□□ -0.98
USP53-206ENST00000510737 AGAP9Q5VTM2 703 aa8.95□□□□□ -0.98
USP53-206ENST00000510737 Q6ZVL8 140 aa8.95□□□□□ -0.98
USP53-206ENST00000510737 CLRN3Q8NCR9 226 aa8.95□□□□□ -0.98
USP53-206ENST00000510737 FBXO18Q8NFZ0 1043 aa8.95□□□□□ -0.98
USP53-206ENST00000510737 FPGT-TNNI3KV9GXZ4 949 aa8.95□□□□□ -0.98
USP53-206ENST00000510737 SALL3Q9BXA9 1300 aa8.95□□□□□ -0.98
USP53-206ENST00000510737 ATRNL1Q5VV63 1379 aa8.95□□□□□ -0.98
USP53-206ENST00000510737 MAP3K5Q99683 1374 aa8.95□□□□□ -0.98
USP53-206ENST00000510737 CFIP05156 583 aa8.94□□□□□ -0.98
USP53-206ENST00000510737 HKR1P10072 659 aa8.94□□□□□ -0.98
USP53-206ENST00000510737 AVPR1BP47901 424 aa8.94□□□□□ -0.98
USP53-206ENST00000510737 FLT3LGP49771 235 aa8.94□□□□□ -0.98
USP53-206ENST00000510737 TRMT2AQ8IZ69 625 aaKnown RBP8.94□□□□□ -0.98
USP53-206ENST00000510737 FAM98AQ8NCA5 519 aaKnown RBP8.94□□□□□ -0.98
USP53-206ENST00000510737 CAVIN3Q969G5 261 aa8.94□□□□□ -0.98
USP53-206ENST00000510737 PRDM11Q9NQV5 511 aa8.94□□□□□ -0.98
USP53-206ENST00000510737 DPP7Q9UHL4 492 aa8.94□□□□□ -0.98
USP53-206ENST00000510737 COX11Q9Y6N1 276 aa8.94□□□□□ -0.98
USP53-206ENST00000510737 TECPR2O15040 1411 aa8.94□□□□□ -0.98
USP53-206ENST00000510737 COL11A2P13942 1736 aaPredicted RBP8.94□□□□□ -0.98
USP53-206ENST00000510737 NEMP1O14524 444 aa8.93□□□□□ -0.98
USP53-206ENST00000510737 PDE8AO60658 829 aa8.93□□□□□ -0.98
USP53-206ENST00000510737 MPLP40238 635 aa8.93□□□□□ -0.98
USP53-206ENST00000510737 FAM50AQ14320 339 aaKnown RBP8.93□□□□□ -0.98
USP53-206ENST00000510737 FSCN1Q16658 493 aaKnown RBP8.93□□□□□ -0.98
USP53-206ENST00000510737 UGT8Q16880 541 aa8.93□□□□□ -0.98
USP53-206ENST00000510737 FAM47AQ5JRC9 791 aa8.93□□□□□ -0.98
USP53-206ENST00000510737 RD3Q7Z3Z2 195 aa8.93□□□□□ -0.98
USP53-206ENST00000510737 CMIPQ8IY22 773 aa8.93□□□□□ -0.98
USP53-206ENST00000510737 SIMC1Q8NDZ2 872 aa8.93□□□□□ -0.98
USP53-206ENST00000510737 ZFP28Q8NHY6 868 aa8.93□□□□□ -0.98
USP53-206ENST00000510737 TSPEARQ8WU66 669 aa8.93□□□□□ -0.98
USP53-206ENST00000510737 PHACTR3Q96KR7 559 aa8.93□□□□□ -0.98
USP53-206ENST00000510737 STK32BQ9NY57 414 aa8.93□□□□□ -0.98
USP53-206ENST00000510737 RPTORQ8N122 1335 aa8.93□□□□□ -0.98
USP53-206ENST00000510737 NRXN1Q9ULB1 1477 aa8.93□□□□□ -0.98
USP53-206ENST00000510737 FMN2Q9NZ56 1722 aa8.93□□□□□ -0.98
USP53-206ENST00000510737 CRYBG1Q9Y4K1 1723 aa8.92□□□□□ -0.98
USP53-206ENST00000510737 VPS8Q8N3P4 1428 aa8.92□□□□□ -0.98
USP53-206ENST00000510737 ATP10DQ9P241 1426 aa8.92□□□□□ -0.98
USP53-206ENST00000510737 ABCC11Q96J66 1382 aa8.92□□□□□ -0.98
USP53-206ENST00000510737 CCDC78A2IDD5 438 aa8.92□□□□□ -0.98
USP53-206ENST00000510737 SPATA31D3P0C874 917 aa8.92□□□□□ -0.98
USP53-206ENST00000510737 ADSLP30566 484 aaPredicted RBP8.92□□□□□ -0.98
USP53-206ENST00000510737 EVA1CP58658 441 aa8.92□□□□□ -0.98
USP53-206ENST00000510737 TXNRD1Q16881 649 aa8.92□□□□□ -0.98
USP53-206ENST00000510737 ATXN7L2Q5T6C5 722 aaPredicted RBP8.92□□□□□ -0.98
USP53-206ENST00000510737 ABHD17BQ5VST6 288 aa8.92□□□□□ -0.98
USP53-206ENST00000510737 B3GNTL1Q67FW5 361 aaPredicted RBP8.92□□□□□ -0.98
USP53-206ENST00000510737 SYCE2Q6PIF2 218 aa8.92□□□□□ -0.98
USP53-206ENST00000510737 SPATA31D4Q6ZUB0 917 aa8.92□□□□□ -0.98
USP53-206ENST00000510737 PDZD4Q76G19 769 aaPredicted RBP8.92□□□□□ -0.98
USP53-206ENST00000510737 KLHL11Q9NVR0 708 aa8.92□□□□□ -0.98
USP53-206ENST00000510737 KIAA0232Q92628 1395 aa8.91□□□□□ -0.98
USP53-206ENST00000510737 RPGRIP1LQ68CZ1 1315 aa8.91□□□□□ -0.98
USP53-206ENST00000510737 LMO1P25800 156 aa8.91□□□□□ -0.98
USP53-206ENST00000510737 PTPN7P35236 360 aa8.91□□□□□ -0.98
USP53-206ENST00000510737 CLRN1P58418 232 aa8.91□□□□□ -0.98
USP53-206ENST00000510737 CCT2P78371 535 aaKnown RBP8.91□□□□□ -0.98
USP53-206ENST00000510737 CDK17Q00537 523 aa8.91□□□□□ -0.98
USP53-206ENST00000510737 FBXO42Q6P3S6 717 aa8.91□□□□□ -0.98
USP53-206ENST00000510737 ZNF572Q7Z3I7 529 aaPredicted RBP8.91□□□□□ -0.98
USP53-206ENST00000510737 TCP11L2Q8N4U5 519 aa8.91□□□□□ -0.98
USP53-206ENST00000510737 OR56A1Q8NGH5 318 aa8.91□□□□□ -0.98
USP53-206ENST00000510737 RIN2Q8WYP3 895 aaPredicted RBP8.91□□□□□ -0.98
USP53-206ENST00000510737 ADGRF5Q8IZF2 1346 aa8.9□□□□□ -0.98
USP53-206ENST00000510737 PJA2O43164 708 aa8.9□□□□□ -0.98
USP53-206ENST00000510737 ITGAMP11215 1152 aa8.9□□□□□ -0.98
USP53-206ENST00000510737 MYCLP1P12525 358 aaPredicted RBP8.9□□□□□ -0.98
USP53-206ENST00000510737 ALOX15P16050 662 aaPredicted RBP8.9□□□□□ -0.98
USP53-206ENST00000510737 ENPP1P22413 925 aa8.9□□□□□ -0.98
USP53-206ENST00000510737 CPEB4Q17RY0 729 aaKnown RBP eCLIP8.9□□□□□ -0.98
USP53-206ENST00000510737 GPR149Q86SP6 731 aa8.9□□□□□ -0.98
USP53-206ENST00000510737 RHOT2Q8IXI1 618 aa8.9□□□□□ -0.98
USP53-206ENST00000510737 ZSWIM1Q9BR11 485 aa8.9□□□□□ -0.98
USP53-206ENST00000510737 PEAK1Q9H792 1746 aa8.9□□□□□ -0.98
USP53-206ENST00000510737 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.89□□□□□ -0.99
USP53-206ENST00000510737 ESRRBO95718 433 aa8.89□□□□□ -0.99
USP53-206ENST00000510737 HLA-DOAP06340 250 aa8.89□□□□□ -0.99
USP53-206ENST00000510737 DHCR24Q15392 516 aa8.89□□□□□ -0.99
USP53-206ENST00000510737 ZNF362Q5T0B9 420 aaPredicted RBP8.89□□□□□ -0.99
USP53-206ENST00000510737 SLC44A3Q8N4M1 653 aa8.89□□□□□ -0.99
USP53-206ENST00000510737 ADARB2Q9NS39 739 aaKnown RBP8.89□□□□□ -0.99
USP53-206ENST00000510737 SCOCQ9UIL1 159 aa8.89□□□□□ -0.99
USP53-206ENST00000510737 POLR2AP24928 1970 aaKnown RBP8.89□□□□□ -0.99
USP53-206ENST00000510737 CLTCL1P53675 1640 aa8.88□□□□□ -0.99
USP53-206ENST00000510737 AKR1B10O60218 316 aa8.88□□□□□ -0.99
USP53-206ENST00000510737 CDKL5O76039 1030 aa8.88□□□□□ -0.99
USP53-206ENST00000510737 CXCR5P32302 372 aa8.88□□□□□ -0.99
USP53-206ENST00000510737 RAP2BP61225 183 aa8.88□□□□□ -0.99
USP53-206ENST00000510737 MED25Q71SY5 747 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms