RNA–Protein interactions for RNA: ENST00000509102.5

UBE3D-207, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,246 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-207ENST00000509102 FAM122AQ96E09 287 aa20.2■□□□□ 0.82
UBE3D-207ENST00000509102 MFSD1Q9H3U5 465 aa20.2■□□□□ 0.82
UBE3D-207ENST00000509102 DPP3Q9NY33 737 aa20.2■□□□□ 0.82
UBE3D-207ENST00000509102 RCOR1Q9UKL0 485 aa20.2■□□□□ 0.82
UBE3D-207ENST00000509102 OR6C75A6NL08 312 aa20.19■□□□□ 0.82
UBE3D-207ENST00000509102 TBC1D4O60343 1298 aa20.19■□□□□ 0.82
UBE3D-207ENST00000509102 PRPF6O94906 941 aaKnown RBP20.19■□□□□ 0.82
UBE3D-207ENST00000509102 OAZ2O95190 189 aa20.19■□□□□ 0.82
UBE3D-207ENST00000509102 LAMP2P13473 410 aa20.19■□□□□ 0.82
UBE3D-207ENST00000509102 GUCY2FP51841 1108 aa20.19■□□□□ 0.82
UBE3D-207ENST00000509102 LILRA4P59901 499 aa20.19■□□□□ 0.82
UBE3D-207ENST00000509102 PABPC1LQ4VXU2 614 aaKnown RBP20.19■□□□□ 0.82
UBE3D-207ENST00000509102 C9orf57Q5W0N0 161 aa20.19■□□□□ 0.82
UBE3D-207ENST00000509102 RESP18Q5W5W9 173 aa20.19■□□□□ 0.82
UBE3D-207ENST00000509102 CNNM4Q6P4Q7 775 aa20.19■□□□□ 0.82
UBE3D-207ENST00000509102 METTL23Q86XA0 190 aa20.19■□□□□ 0.82
UBE3D-207ENST00000509102 TCEAL8Q8IYN2 117 aa20.19■□□□□ 0.82
UBE3D-207ENST00000509102 CACTINQ8WUQ7 758 aaKnown RBP20.19■□□□□ 0.82
UBE3D-207ENST00000509102 ASIC4Q96FT7 647 aa20.19■□□□□ 0.82
UBE3D-207ENST00000509102 MYADMQ96S97 322 aa20.19■□□□□ 0.82
UBE3D-207ENST00000509102 C7orf25Q9BPX7 421 aa20.19■□□□□ 0.82
UBE3D-207ENST00000509102 RBAKQ9NYW8 714 aaPredicted RBP20.19■□□□□ 0.82
UBE3D-207ENST00000509102 AFF4Q9UHB7 1163 aaKnown RBP20.19■□□□□ 0.82
UBE3D-207ENST00000509102 DSEQ9UL01 958 aa20.19■□□□□ 0.82
UBE3D-207ENST00000509102 EIF3DO15371 548 aaKnown RBP eCLIP20.18■□□□□ 0.82
UBE3D-207ENST00000509102 N4BP1O75113 896 aaKnown RBP20.18■□□□□ 0.82
UBE3D-207ENST00000509102 TYMPP19971 482 aa20.18■□□□□ 0.82
UBE3D-207ENST00000509102 FAM26FQ5R3K3 315 aa20.18■□□□□ 0.82
UBE3D-207ENST00000509102 OVOS1Q6IE37 1185 aa20.18■□□□□ 0.82
UBE3D-207ENST00000509102 SAAL1Q96ER3 474 aa20.18■□□□□ 0.82
UBE3D-207ENST00000509102 SPATA32Q96LK8 384 aa20.18■□□□□ 0.82
UBE3D-207ENST00000509102 ZNF560Q96MR9 790 aa20.18■□□□□ 0.82
UBE3D-207ENST00000509102 PRRX2Q99811 253 aa20.18■□□□□ 0.82
UBE3D-207ENST00000509102 IKZF4Q9H2S9 585 aa20.18■□□□□ 0.82
UBE3D-207ENST00000509102 FBXL21Q9UKT6 434 aa20.18■□□□□ 0.82
UBE3D-207ENST00000509102 CDH7Q9ULB5 785 aa20.18■□□□□ 0.82
UBE3D-207ENST00000509102 KCNH3Q9ULD8 1083 aa20.18■□□□□ 0.82
UBE3D-207ENST00000509102 DUSP12Q9UNI6 340 aa20.18■□□□□ 0.82
UBE3D-207ENST00000509102 R3HCC1Q9Y3T6 440 aaKnown RBP20.18■□□□□ 0.82
UBE3D-207ENST00000509102 TIMM13Q9Y5L4 95 aaPredicted RBP20.18■□□□□ 0.82
UBE3D-207ENST00000509102 EXTL3O43909 919 aa20.17■□□□□ 0.82
UBE3D-207ENST00000509102 PTPN2P17706 415 aa20.17■□□□□ 0.82
UBE3D-207ENST00000509102 PNPLA4P41247 253 aa20.17■□□□□ 0.82
UBE3D-207ENST00000509102 TAF6P49848 677 aa20.17■□□□□ 0.82
UBE3D-207ENST00000509102 TFAMQ00059 246 aaKnown RBP20.17■□□□□ 0.82
UBE3D-207ENST00000509102 ADCY1Q08828 1119 aa20.17■□□□□ 0.82
UBE3D-207ENST00000509102 SV2CQ496J9 727 aa20.17■□□□□ 0.82
UBE3D-207ENST00000509102 IQCEQ6IPM2 695 aa20.17■□□□□ 0.82
UBE3D-207ENST00000509102 CRELD2Q6UXH1 353 aaPredicted RBP20.17■□□□□ 0.82
UBE3D-207ENST00000509102 UNC13DQ70J99 1090 aa20.17■□□□□ 0.82
UBE3D-207ENST00000509102 MTSS1LQ765P7 747 aa20.17■□□□□ 0.82
UBE3D-207ENST00000509102 BRSK2Q8IWQ3 736 aa20.17■□□□□ 0.82
UBE3D-207ENST00000509102 GPD1LQ8N335 351 aa20.17■□□□□ 0.82
UBE3D-207ENST00000509102 SENP8Q96LD8 212 aa20.17■□□□□ 0.82
UBE3D-207ENST00000509102 MRPS23Q9Y3D9 190 aaKnown RBP20.17■□□□□ 0.82
UBE3D-207ENST00000509102 INSL5Q9Y5Q6 135 aa20.17■□□□□ 0.82
UBE3D-207ENST00000509102 MYO10Q9HD67 2058 aa20.16■□□□□ 0.82
UBE3D-207ENST00000509102 ANO9A1A5B4 782 aa20.16■□□□□ 0.82
UBE3D-207ENST00000509102 PIRO00625 290 aa20.16■□□□□ 0.82
UBE3D-207ENST00000509102 PLA2G5P39877 138 aa20.16■□□□□ 0.82
UBE3D-207ENST00000509102 NTHL1P78549 312 aa20.16■□□□□ 0.82
UBE3D-207ENST00000509102 PLD1Q13393 1074 aa20.16■□□□□ 0.82
UBE3D-207ENST00000509102 CBWD1Q9BRT8 395 aa20.16■□□□□ 0.82
UBE3D-207ENST00000509102 FGFBP2Q9BYJ0 223 aa20.16■□□□□ 0.82
UBE3D-207ENST00000509102 PCIF1Q9H4Z3 704 aa20.16■□□□□ 0.82
UBE3D-207ENST00000509102 KIAA1586Q9HCI6 787 aa20.16■□□□□ 0.82
UBE3D-207ENST00000509102 UBE4BO95155 1302 aa20.16■□□□□ 0.82
UBE3D-207ENST00000509102 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.15■□□□□ 0.82
UBE3D-207ENST00000509102 PVALEFA0A1B0GWK0 134 aa20.15■□□□□ 0.82
UBE3D-207ENST00000509102 ZNF197O14709 1029 aa20.15■□□□□ 0.82
UBE3D-207ENST00000509102 PPEF2O14830 753 aa20.15■□□□□ 0.82
UBE3D-207ENST00000509102 AFMP43652 599 aa20.15■□□□□ 0.82
UBE3D-207ENST00000509102 MYBPC2Q14324 1141 aa20.15■□□□□ 0.82
UBE3D-207ENST00000509102 SURF1Q15526 300 aa20.15■□□□□ 0.82
UBE3D-207ENST00000509102 HS2ST1Q7LGA3 356 aa20.15■□□□□ 0.82
UBE3D-207ENST00000509102 THEM5Q8N1Q8 247 aa20.15■□□□□ 0.82
UBE3D-207ENST00000509102 FGF13Q92913 245 aa20.15■□□□□ 0.82
UBE3D-207ENST00000509102 ZNF512Q96ME7 567 aaPredicted RBP20.15■□□□□ 0.82
UBE3D-207ENST00000509102 SCAND2PQ9GZW5 306 aaPredicted RBP20.15■□□□□ 0.82
UBE3D-207ENST00000509102 DNMT3BQ9UBC3 853 aaKnown RBP20.15■□□□□ 0.82
UBE3D-207ENST00000509102 USP25Q9UHP3 1055 aa20.15■□□□□ 0.82
UBE3D-207ENST00000509102 GOLGA8IPA6NC78 632 aa20.14■□□□□ 0.81
UBE3D-207ENST00000509102 ZNF233A6NK53 670 aa20.14■□□□□ 0.81
UBE3D-207ENST00000509102 GOLGA8JA6NMD2 632 aa20.14■□□□□ 0.81
UBE3D-207ENST00000509102 CYB561D2O14569 222 aa20.14■□□□□ 0.81
UBE3D-207ENST00000509102 RHOP08100 348 aa20.14■□□□□ 0.81
UBE3D-207ENST00000509102 TMEM191BP0C7N4 346 aa20.14■□□□□ 0.81
UBE3D-207ENST00000509102 SLFN14P0C7P3 912 aa20.14■□□□□ 0.81
UBE3D-207ENST00000509102 RFX1P22670 979 aa20.14■□□□□ 0.81
UBE3D-207ENST00000509102 CMA1P23946 247 aa20.14■□□□□ 0.81
UBE3D-207ENST00000509102 SNRPFP62306 86 aaKnown RBP20.14■□□□□ 0.81
UBE3D-207ENST00000509102 GPR17Q13304 367 aa20.14■□□□□ 0.81
UBE3D-207ENST00000509102 CYP4A22Q5TCH4 519 aa20.14■□□□□ 0.81
UBE3D-207ENST00000509102 RNF19BQ6ZMZ0 732 aa20.14■□□□□ 0.81
UBE3D-207ENST00000509102 EFCAB13Q8IY85 973 aa20.14■□□□□ 0.81
UBE3D-207ENST00000509102 TMEM130Q8N3G9 435 aa20.14■□□□□ 0.81
UBE3D-207ENST00000509102 LEMD2Q8NC56 503 aa20.14■□□□□ 0.81
UBE3D-207ENST00000509102 LEO1Q8WVC0 666 aaPredicted RBP20.14■□□□□ 0.81
UBE3D-207ENST00000509102 HPS3Q969F9 1004 aa20.14■□□□□ 0.81
UBE3D-207ENST00000509102 CORO1BQ9BR76 489 aa20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms