RNA–Protein interactions for RNA: ENST00000508841.1

GYPB-210, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 5

Gene GYPB, Length 610 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-210ENST00000508841 PNKPQ96T60 521 aa7.4□□□□□ -1.22
GYPB-210ENST00000508841 RNPEPQ9H4A4 650 aa7.4□□□□□ -1.22
GYPB-210ENST00000508841 ATP6V0A4Q9HBG4 840 aa7.4□□□□□ -1.22
GYPB-210ENST00000508841 SLAMF7Q9NQ25 335 aa7.4□□□□□ -1.22
GYPB-210ENST00000508841 CPA4Q9UI42 421 aa7.4□□□□□ -1.22
GYPB-210ENST00000508841 PCDHA6Q9UN73 950 aa7.4□□□□□ -1.22
GYPB-210ENST00000508841 AGFG2O95081 481 aa7.39□□□□□ -1.23
GYPB-210ENST00000508841 AHSGP02765 367 aa7.39□□□□□ -1.23
GYPB-210ENST00000508841 SLC7A1P30825 629 aa7.39□□□□□ -1.23
GYPB-210ENST00000508841 MAGEA10P43363 369 aaPredicted RBP7.39□□□□□ -1.23
GYPB-210ENST00000508841 NOMO3P69849 1222 aa7.39□□□□□ -1.23
GYPB-210ENST00000508841 SPATS1Q496A3 300 aa7.39□□□□□ -1.23
GYPB-210ENST00000508841 FAM102AQ5T9C2 384 aaPredicted RBP7.39□□□□□ -1.23
GYPB-210ENST00000508841 SWSAP1Q6NVH7 229 aa7.39□□□□□ -1.23
GYPB-210ENST00000508841 TMPRSS6Q8IU80 811 aa7.39□□□□□ -1.23
GYPB-210ENST00000508841 OR6B3Q8NGW1 331 aa7.39□□□□□ -1.23
GYPB-210ENST00000508841 PGBD4Q96DM1 585 aa7.39□□□□□ -1.23
GYPB-210ENST00000508841 PHACTR3Q96KR7 559 aa7.39□□□□□ -1.23
GYPB-210ENST00000508841 C8orf49Q96NF6 230 aa7.39□□□□□ -1.23
GYPB-210ENST00000508841 MED15Q96RN5 788 aa7.39□□□□□ -1.23
GYPB-210ENST00000508841 C1QTNF3Q9BXJ4 246 aa7.39□□□□□ -1.23
GYPB-210ENST00000508841 KIAA1586Q9HCI6 787 aa7.39□□□□□ -1.23
GYPB-210ENST00000508841 FAM50BQ9Y247 325 aa7.39□□□□□ -1.23
GYPB-210ENST00000508841 NEU2Q9Y3R4 380 aa7.39□□□□□ -1.23
GYPB-210ENST00000508841 GAGE12BA1L429 117 aa7.38□□□□□ -1.23
GYPB-210ENST00000508841 GAGE12HA6NDE8 117 aa7.38□□□□□ -1.23
GYPB-210ENST00000508841 MYO1FO00160 1098 aa7.38□□□□□ -1.23
GYPB-210ENST00000508841 PPFIA4O75335 1185 aa7.38□□□□□ -1.23
GYPB-210ENST00000508841 NPR1P16066 1061 aa7.38□□□□□ -1.23
GYPB-210ENST00000508841 EN2P19622 333 aaPredicted RBP7.38□□□□□ -1.23
GYPB-210ENST00000508841 SLC6A2P23975 617 aa7.38□□□□□ -1.23
GYPB-210ENST00000508841 EXOSC9Q06265 439 aaKnown RBP7.38□□□□□ -1.23
GYPB-210ENST00000508841 UBE4AQ14139 1066 aa7.38□□□□□ -1.23
GYPB-210ENST00000508841 SLC44A4Q53GD3 710 aa7.38□□□□□ -1.23
GYPB-210ENST00000508841 ZNF783Q6ZMS7 281 aa7.38□□□□□ -1.23
GYPB-210ENST00000508841 SYT12Q8IV01 421 aa7.38□□□□□ -1.23
GYPB-210ENST00000508841 ZFPM1Q8IX07 1006 aa7.38□□□□□ -1.23
GYPB-210ENST00000508841 NT5C1BQ96P26 610 aa7.38□□□□□ -1.23
GYPB-210ENST00000508841 CNPPD1Q9BV87 410 aa7.38□□□□□ -1.23
GYPB-210ENST00000508841 TRIM54Q9BYV2 358 aa7.38□□□□□ -1.23
GYPB-210ENST00000508841 PARPBPQ9NWS1 579 aa7.38□□□□□ -1.23
GYPB-210ENST00000508841 OGDHLQ9ULD0 1010 aa7.38□□□□□ -1.23
GYPB-210ENST00000508841 PLEKHM1Q9Y4G2 1056 aa7.38□□□□□ -1.23
GYPB-210ENST00000508841 ZNF785A8K8V0 405 aa7.37□□□□□ -1.23
GYPB-210ENST00000508841 PMM2O15305 246 aa7.37□□□□□ -1.23
GYPB-210ENST00000508841 PQBP1O60828 265 aaKnown RBP7.37□□□□□ -1.23
GYPB-210ENST00000508841 APOBEC3AP31941 199 aaPredicted RBP7.37□□□□□ -1.23
GYPB-210ENST00000508841 POU6F2P78424 691 aaPredicted RBP7.37□□□□□ -1.23
GYPB-210ENST00000508841 ZNF844Q08AG5 666 aa7.37□□□□□ -1.23
GYPB-210ENST00000508841 EFEMP1Q12805 493 aa7.37□□□□□ -1.23
GYPB-210ENST00000508841 IFIT5Q13325 482 aaKnown RBP7.37□□□□□ -1.23
GYPB-210ENST00000508841 R3HDM1Q15032 1099 aaKnown RBP7.37□□□□□ -1.23
GYPB-210ENST00000508841 RABL3Q5HYI8 236 aa7.37□□□□□ -1.23
GYPB-210ENST00000508841 ARMC6Q6NXE6 501 aa7.37□□□□□ -1.23
GYPB-210ENST00000508841 FOXR2Q6PJQ5 311 aa7.37□□□□□ -1.23
GYPB-210ENST00000508841 GDF7Q7Z4P5 450 aa7.37□□□□□ -1.23
GYPB-210ENST00000508841 SVIPQ8NHG7 77 aa7.37□□□□□ -1.23
GYPB-210ENST00000508841 SLC46A2Q9BY10 475 aa7.37□□□□□ -1.23
GYPB-210ENST00000508841 ZNF703Q9H7S9 590 aaPredicted RBP7.37□□□□□ -1.23
GYPB-210ENST00000508841 SORCS3Q9UPU3 1222 aa7.37□□□□□ -1.23
GYPB-210ENST00000508841 TSC22D4Q9Y3Q8 395 aa7.37□□□□□ -1.23
GYPB-210ENST00000508841 LEFTY2O00292 366 aa7.36□□□□□ -1.23
GYPB-210ENST00000508841 APAF1O14727 1248 aa7.36□□□□□ -1.23
GYPB-210ENST00000508841 HLA-DOAP06340 250 aa7.36□□□□□ -1.23
GYPB-210ENST00000508841 KITP10721 976 aa7.36□□□□□ -1.23
GYPB-210ENST00000508841 BRAFP15056 766 aa7.36□□□□□ -1.23
GYPB-210ENST00000508841 HDCP19113 662 aa7.36□□□□□ -1.23
GYPB-210ENST00000508841 ARFIP2P53365 341 aa7.36□□□□□ -1.23
GYPB-210ENST00000508841 PSMC1P62191 440 aaKnown RBP7.36□□□□□ -1.23
GYPB-210ENST00000508841 TCF15Q12870 199 aa7.36□□□□□ -1.23
GYPB-210ENST00000508841 AMOTQ4VCS5 1084 aa7.36□□□□□ -1.23
GYPB-210ENST00000508841 TSHZ3Q63HK5 1081 aa7.36□□□□□ -1.23
GYPB-210ENST00000508841 METRNLQ641Q3 311 aa7.36□□□□□ -1.23
GYPB-210ENST00000508841 SLC17A8Q8NDX2 589 aa7.36□□□□□ -1.23
GYPB-210ENST00000508841 KLHL32Q96NJ5 620 aa7.36□□□□□ -1.23
GYPB-210ENST00000508841 DPH1Q9BZG8 443 aa7.36□□□□□ -1.23
GYPB-210ENST00000508841 IMPG2Q9BZV3 1241 aa7.36□□□□□ -1.23
GYPB-210ENST00000508841 ZNF287Q9HBT7 754 aa7.36□□□□□ -1.23
GYPB-210ENST00000508841 RNF181Q9P0P0 153 aa7.36□□□□□ -1.23
GYPB-210ENST00000508841 CAMSAP3Q9P1Y5 1249 aaPredicted RBP7.36□□□□□ -1.23
GYPB-210ENST00000508841 CHST2Q9Y4C5 530 aa7.36□□□□□ -1.23
GYPB-210ENST00000508841 USP15Q9Y4E8 981 aaPredicted RBP7.36□□□□□ -1.23
GYPB-210ENST00000508841 PCDHGB6Q9Y5F9 930 aa7.36□□□□□ -1.23
GYPB-210ENST00000508841 PRSS29PA6NIE9 313 aa7.35□□□□□ -1.23
GYPB-210ENST00000508841 TBC1D4O60343 1298 aa7.35□□□□□ -1.23
GYPB-210ENST00000508841 SCAF4O95104 1147 aaKnown RBP7.35□□□□□ -1.23
GYPB-210ENST00000508841 ZNF135P52742 658 aaPredicted RBP7.35□□□□□ -1.23
GYPB-210ENST00000508841 RNASE9P60153 205 aaKnown RBP7.35□□□□□ -1.23
GYPB-210ENST00000508841 ADAM17P78536 824 aa7.35□□□□□ -1.23
GYPB-210ENST00000508841 RAB32Q13637 225 aa7.35□□□□□ -1.23
GYPB-210ENST00000508841 BRD3Q15059 726 aa7.35□□□□□ -1.23
GYPB-210ENST00000508841 CNGA2Q16280 664 aa7.35□□□□□ -1.23
GYPB-210ENST00000508841 NOMO2Q5JPE7 1267 aa7.35□□□□□ -1.23
GYPB-210ENST00000508841 LMBRD2Q68DH5 695 aaPredicted RBP7.35□□□□□ -1.23
GYPB-210ENST00000508841 USP37Q86T82 979 aa7.35□□□□□ -1.23
GYPB-210ENST00000508841 TMIEQ8NEW7 156 aa7.35□□□□□ -1.23
GYPB-210ENST00000508841 OR56A1Q8NGH5 318 aa7.35□□□□□ -1.23
GYPB-210ENST00000508841 PHKBQ93100 1093 aa7.35□□□□□ -1.23
GYPB-210ENST00000508841 ZC3H10Q96K80 434 aaKnown RBP7.35□□□□□ -1.23
GYPB-210ENST00000508841 MOGAT1Q96PD6 335 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms