RNA–Protein interactions for RNA: ENST00000507965.5

ATXN3-210, Transcript of ataxin 3, human

TSL 2

Gene ATXN3, Length 708 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATXN3-210	ENST00000507965	DRP2	Q13474	957 aa		6.25	□□□□□ -1.41
ATXN3-210	ENST00000507965	IFI16	Q16666	785 aa	Known RBP	6.25	□□□□□ -1.41
ATXN3-210	ENST00000507965	PFKFB3	Q16875	520 aa	Predicted RBP	6.25	□□□□□ -1.41
ATXN3-210	ENST00000507965	SPRED3	Q2MJR0	410 aa		6.25	□□□□□ -1.41
ATXN3-210	ENST00000507965	PRR16	Q569H4	304 aa		6.25	□□□□□ -1.41
ATXN3-210	ENST00000507965	ZNF484	Q5JVG2	852 aa		6.25	□□□□□ -1.41
ATXN3-210	ENST00000507965	ANKRD54	Q6NXT1	300 aa		6.25	□□□□□ -1.41
ATXN3-210	ENST00000507965	KCNT2	Q6UVM3	1135 aa		6.25	□□□□□ -1.41
ATXN3-210	ENST00000507965	SYNE3	Q6ZMZ3	975 aa		6.25	□□□□□ -1.41
ATXN3-210	ENST00000507965	BMP8A	Q7Z5Y6	402 aa		6.25	□□□□□ -1.41
ATXN3-210	ENST00000507965	TMEM173	Q86WV6	379 aa	Predicted RBP	6.25	□□□□□ -1.41
ATXN3-210	ENST00000507965	SUGP1	Q8IWZ8	645 aa	Known RBP	6.25	□□□□□ -1.41
ATXN3-210	ENST00000507965	LRRC43	Q8N309	656 aa		6.25	□□□□□ -1.41
ATXN3-210	ENST00000507965	ZNF713	Q8N859	430 aa	Predicted RBP	6.25	□□□□□ -1.41
ATXN3-210	ENST00000507965	AUTS2	Q8WXX7	1259 aa		6.25	□□□□□ -1.41
ATXN3-210	ENST00000507965	MRPS27	Q92552	414 aa	Known RBP	6.25	□□□□□ -1.41
ATXN3-210	ENST00000507965	TNPO1	Q92973	898 aa	Known RBP	6.25	□□□□□ -1.41
ATXN3-210	ENST00000507965	HRASLS5	Q96KN8	279 aa		6.25	□□□□□ -1.41
ATXN3-210	ENST00000507965	ZNF558	Q96NG5	402 aa		6.25	□□□□□ -1.41
ATXN3-210	ENST00000507965	TRIM56	Q9BRZ2	755 aa	Known RBP	6.25	□□□□□ -1.41
ATXN3-210	ENST00000507965	ADAMTS10	Q9H324	1103 aa		6.25	□□□□□ -1.41
ATXN3-210	ENST00000507965	POMK	Q9H5K3	350 aa		6.25	□□□□□ -1.41
ATXN3-210	ENST00000507965	ATP6V0A4	Q9HBG4	840 aa		6.25	□□□□□ -1.41
ATXN3-210	ENST00000507965	FAM53C	Q9NYF3	392 aa		6.25	□□□□□ -1.41
ATXN3-210	ENST00000507965	GABBR1	Q9UBS5	961 aa		6.25	□□□□□ -1.41
ATXN3-210	ENST00000507965	AKT3	Q9Y243	479 aa		6.25	□□□□□ -1.41
ATXN3-210	ENST00000507965	MYO15A	Q9UKN7	3530 aa		6.24	□□□□□ -1.41
ATXN3-210	ENST00000507965	ESYT2	A0FGR8	921 aa		6.24	□□□□□ -1.41
ATXN3-210	ENST00000507965	ANKRD33B	A6NCL7	494 aa		6.24	□□□□□ -1.41
ATXN3-210	ENST00000507965	MEIS3P2	A8K0S8	358 aa		6.24	□□□□□ -1.41
ATXN3-210	ENST00000507965	C2CD4D	B7Z1M9	353 aa		6.24	□□□□□ -1.41
ATXN3-210	ENST00000507965	NT5C1B-RDH14	C9J2C7	533 aa		6.24	□□□□□ -1.41
ATXN3-210	ENST00000507965	CHMP2A	O43633	222 aa		6.24	□□□□□ -1.41
ATXN3-210	ENST00000507965	B4GALT3	O60512	393 aa		6.24	□□□□□ -1.41
ATXN3-210	ENST00000507965	CYP3A4	P08684	503 aa		6.24	□□□□□ -1.41
ATXN3-210	ENST00000507965	ZNF16	P17020	682 aa	Predicted RBP	6.24	□□□□□ -1.41
ATXN3-210	ENST00000507965	CA8	P35219	290 aa		6.24	□□□□□ -1.41
ATXN3-210	ENST00000507965	RAP1GAP	P47736	663 aa		6.24	□□□□□ -1.41
ATXN3-210	ENST00000507965	METAP2	P50579	478 aa	Known RBP eCLIP	6.24	□□□□□ -1.41
ATXN3-210	ENST00000507965	GPC3	P51654	580 aa		6.24	□□□□□ -1.41
ATXN3-210	ENST00000507965	FAM189B	P81408	668 aa		6.24	□□□□□ -1.41
ATXN3-210	ENST00000507965	SET	Q01105	290 aa	Predicted RBP	6.24	□□□□□ -1.41
ATXN3-210	ENST00000507965	PLCB3	Q01970	1234 aa		6.24	□□□□□ -1.41
ATXN3-210	ENST00000507965	LONRF3	Q496Y0	759 aa		6.24	□□□□□ -1.41
ATXN3-210	ENST00000507965	ZNF746	Q6NUN9	644 aa	Predicted RBP	6.24	□□□□□ -1.41
ATXN3-210	ENST00000507965	EFCAB12	Q6NXP0	572 aa		6.24	□□□□□ -1.41
ATXN3-210	ENST00000507965	TMEM184A	Q6ZMB5	413 aa		6.24	□□□□□ -1.41
ATXN3-210	ENST00000507965	ECHDC2	Q86YB7	292 aa		6.24	□□□□□ -1.41
ATXN3-210	ENST00000507965	SMAP1	Q8IYB5	467 aa	Predicted RBP	6.24	□□□□□ -1.41
ATXN3-210	ENST00000507965	REXO1	Q8N1G1	1221 aa	Known RBP	6.24	□□□□□ -1.41
ATXN3-210	ENST00000507965	SLC39A11	Q8N1S5	342 aa		6.24	□□□□□ -1.41
ATXN3-210	ENST00000507965	C12orf76	Q8N812	135 aa	Predicted RBP	6.24	□□□□□ -1.41
ATXN3-210	ENST00000507965	PHKB	Q93100	1093 aa		6.24	□□□□□ -1.41
ATXN3-210	ENST00000507965	SCLT1	Q96NL6	688 aa		6.24	□□□□□ -1.41
ATXN3-210	ENST00000507965	ASB16	Q96NS5	453 aa		6.24	□□□□□ -1.41
ATXN3-210	ENST00000507965	CDCA3	Q99618	268 aa	Predicted RBP	6.24	□□□□□ -1.41
ATXN3-210	ENST00000507965	SH2D3A	Q9BRG2	576 aa		6.24	□□□□□ -1.41
ATXN3-210	ENST00000507965	ZMYND12	Q9H0C1	365 aa		6.24	□□□□□ -1.41
ATXN3-210	ENST00000507965	TMEM117	Q9H0C3	514 aa		6.24	□□□□□ -1.41
ATXN3-210	ENST00000507965	ELAC1	Q9H777	363 aa	Known RBP	6.24	□□□□□ -1.41
ATXN3-210	ENST00000507965	TCEAL9	Q9UHQ7	104 aa		6.24	□□□□□ -1.41
ATXN3-210	ENST00000507965	DCTN4	Q9UJW0	460 aa		6.24	□□□□□ -1.41
ATXN3-210	ENST00000507965	LZTS1	Q9Y250	596 aa		6.24	□□□□□ -1.41
ATXN3-210	ENST00000507965	SAMM50	Q9Y512	469 aa		6.24	□□□□□ -1.41
ATXN3-210	ENST00000507965	PCDHA10	Q9Y5I2	948 aa		6.24	□□□□□ -1.41
ATXN3-210	ENST00000507965	HCFC2	Q9Y5Z7	792 aa		6.24	□□□□□ -1.41
ATXN3-210	ENST00000507965	MTCL1	Q9Y4B5	1905 aa	Known RBP	6.24	□□□□□ -1.41
ATXN3-210	ENST00000507965	MYO10	Q9HD67	2058 aa		6.24	□□□□□ -1.41
ATXN3-210	ENST00000507965	MIA3	Q5JRA6	1907 aa		6.23	□□□□□ -1.41
ATXN3-210	ENST00000507965	ZC3H11B	A0A1B0GUI2	810 aa	Predicted RBP	6.23	□□□□□ -1.41
ATXN3-210	ENST00000507965		A0A1W2PP55	124 aa		6.23	□□□□□ -1.41
ATXN3-210	ENST00000507965	C2orf71	A6NGG8	1288 aa		6.23	□□□□□ -1.41
ATXN3-210	ENST00000507965	KRTAP9-7	A8MTY7	169 aa		6.23	□□□□□ -1.41
ATXN3-210	ENST00000507965		H0Y858	1186 aa		6.23	□□□□□ -1.41
ATXN3-210	ENST00000507965	MSH4	O15457	936 aa		6.23	□□□□□ -1.41
ATXN3-210	ENST00000507965	CLASP2	O75122	1294 aa	Known RBP	6.23	□□□□□ -1.41
ATXN3-210	ENST00000507965	ZC3H11A	O75152	810 aa	Known RBP eCLIP	6.23	□□□□□ -1.41
ATXN3-210	ENST00000507965	B3GALT4	O96024	378 aa		6.23	□□□□□ -1.41
ATXN3-210	ENST00000507965	ASGR2	P07307	311 aa		6.23	□□□□□ -1.41
ATXN3-210	ENST00000507965	SRGAP2B	P0DMP2	458 aa		6.23	□□□□□ -1.41
ATXN3-210	ENST00000507965	DARS	P14868	501 aa	Known RBP	6.23	□□□□□ -1.41
ATXN3-210	ENST00000507965	EPCAM	P16422	314 aa		6.23	□□□□□ -1.41
ATXN3-210	ENST00000507965	EIF4B	P23588	611 aa	Known RBP	6.23	□□□□□ -1.41
ATXN3-210	ENST00000507965	AVPR2	P30518	371 aa		6.23	□□□□□ -1.41
ATXN3-210	ENST00000507965	PPM1A	P35813	382 aa		6.23	□□□□□ -1.41
ATXN3-210	ENST00000507965	BCAR1	P56945	870 aa		6.23	□□□□□ -1.41
ATXN3-210	ENST00000507965	SMC1A	Q14683	1233 aa	Known RBP	6.23	□□□□□ -1.41
ATXN3-210	ENST00000507965	MLANA	Q16655	118 aa		6.23	□□□□□ -1.41
ATXN3-210	ENST00000507965	BMP2KL	Q5H9B9	411 aa		6.23	□□□□□ -1.41
ATXN3-210	ENST00000507965	ODR4	Q5SWX8	454 aa		6.23	□□□□□ -1.41
ATXN3-210	ENST00000507965	RARS2	Q5T160	578 aa	Known RBP	6.23	□□□□□ -1.41
ATXN3-210	ENST00000507965		Q6ZUG5	572 aa		6.23	□□□□□ -1.41
ATXN3-210	ENST00000507965	TMC7	Q7Z402	723 aa		6.23	□□□□□ -1.41
ATXN3-210	ENST00000507965	ZSWIM9	Q86XI8	627 aa		6.23	□□□□□ -1.41
ATXN3-210	ENST00000507965	TMEM105	Q8N8V8	129 aa		6.23	□□□□□ -1.41
ATXN3-210	ENST00000507965	KREMEN2	Q8NCW0	462 aa		6.23	□□□□□ -1.41
ATXN3-210	ENST00000507965	ZSCAN18	Q8TBC5	510 aa	Predicted RBP	6.23	□□□□□ -1.41
ATXN3-210	ENST00000507965	BRF1	Q92994	677 aa		6.23	□□□□□ -1.41
ATXN3-210	ENST00000507965	LPP	Q93052	612 aa		6.23	□□□□□ -1.41
ATXN3-210	ENST00000507965	MAP7D2	Q96T17	732 aa		6.23	□□□□□ -1.41

Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms