RNA–Protein interactions for RNA: ENST00000506163.5

SMN1-204, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMN1, Length 1,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-204ENST00000506163 MFSD14AQ96MC6 490 aa19.28■□□□□ 0.68
SMN1-204ENST00000506163 MTMR12Q9C0I1 747 aa19.28■□□□□ 0.68
SMN1-204ENST00000506163 KIAA1586Q9HCI6 787 aa19.28■□□□□ 0.68
SMN1-204ENST00000506163 INTS13Q9NVM9 706 aa19.28■□□□□ 0.68
SMN1-204ENST00000506163 FBXL5Q9UKA1 691 aa19.28■□□□□ 0.68
SMN1-204ENST00000506163 C19orf67A6NJJ6 358 aa19.27■□□□□ 0.68
SMN1-204ENST00000506163 OAZ2O95190 189 aa19.27■□□□□ 0.68
SMN1-204ENST00000506163 C1RP00736 705 aa19.27■□□□□ 0.68
SMN1-204ENST00000506163 ITGB3P05106 788 aa19.27■□□□□ 0.68
SMN1-204ENST00000506163 CASP4P49662 377 aa19.27■□□□□ 0.68
SMN1-204ENST00000506163 ITIH3Q06033 890 aa19.27■□□□□ 0.68
SMN1-204ENST00000506163 CBX2Q14781 532 aaPredicted RBP19.27■□□□□ 0.68
SMN1-204ENST00000506163 SLC8B1Q6J4K2 584 aa19.27■□□□□ 0.68
SMN1-204ENST00000506163 SLC9A9Q8IVB4 645 aa19.27■□□□□ 0.68
SMN1-204ENST00000506163 ADHFE1Q8IWW8 467 aa19.27■□□□□ 0.68
SMN1-204ENST00000506163 ELOA2Q8IYF1 753 aaPredicted RBP19.27■□□□□ 0.68
SMN1-204ENST00000506163 GUF1Q8N442 669 aaKnown RBP19.27■□□□□ 0.68
SMN1-204ENST00000506163 ZNF516Q92618 1163 aa19.27■□□□□ 0.68
SMN1-204ENST00000506163 ZNF707Q96C28 371 aaPredicted RBP19.27■□□□□ 0.68
SMN1-204ENST00000506163 IPO9Q96P70 1041 aaKnown RBP19.27■□□□□ 0.68
SMN1-204ENST00000506163 SFXN1Q9H9B4 322 aa19.27■□□□□ 0.68
SMN1-204ENST00000506163 FBXW11Q9UKB1 542 aa19.27■□□□□ 0.68
SMN1-204ENST00000506163 TRAF3IP3Q9Y228 551 aa19.27■□□□□ 0.68
SMN1-204ENST00000506163 PAPLNO95428 1278 aa19.26■□□□□ 0.67
SMN1-204ENST00000506163 NR3C1P04150 777 aa19.26■□□□□ 0.67
SMN1-204ENST00000506163 POLR2BP30876 1174 aaKnown RBP19.26■□□□□ 0.67
SMN1-204ENST00000506163 PSMD6Q15008 389 aa19.26■□□□□ 0.67
SMN1-204ENST00000506163 DSTYKQ6XUX3 929 aa19.26■□□□□ 0.67
SMN1-204ENST00000506163 CLEC17AQ6ZS10 378 aa19.26■□□□□ 0.67
SMN1-204ENST00000506163 GPR149Q86SP6 731 aa19.26■□□□□ 0.67
SMN1-204ENST00000506163 CSGALNACT2Q8N6G5 542 aa19.26■□□□□ 0.67
SMN1-204ENST00000506163 APPL2Q8NEU8 664 aa19.26■□□□□ 0.67
SMN1-204ENST00000506163 GOLGA5Q8TBA6 731 aa19.26■□□□□ 0.67
SMN1-204ENST00000506163 KHSRPQ92945 711 aaKnown RBP eCLIP19.26■□□□□ 0.67
SMN1-204ENST00000506163 CCDC47Q96A33 483 aaKnown RBP19.26■□□□□ 0.67
SMN1-204ENST00000506163 CCDC127Q96BQ5 260 aa19.26■□□□□ 0.67
SMN1-204ENST00000506163 GSDMAQ96QA5 445 aa19.26■□□□□ 0.67
SMN1-204ENST00000506163 POMKQ9H5K3 350 aa19.26■□□□□ 0.67
SMN1-204ENST00000506163 AGAP1Q9UPQ3 857 aa19.26■□□□□ 0.67
SMN1-204ENST00000506163 FAM50BQ9Y247 325 aa19.26■□□□□ 0.67
SMN1-204ENST00000506163 C2orf16Q68DN1 1984 aa19.26■□□□□ 0.67
SMN1-204ENST00000506163 CCDC195A0A1B0GUA6 201 aa19.25■□□□□ 0.67
SMN1-204ENST00000506163 WDR27A2RRH5 827 aa19.25■□□□□ 0.67
SMN1-204ENST00000506163 EXOC3O60645 756 aa19.25■□□□□ 0.67
SMN1-204ENST00000506163 ABLIM3O94929 683 aa19.25■□□□□ 0.67
SMN1-204ENST00000506163 PRCPP42785 496 aa19.25■□□□□ 0.67
SMN1-204ENST00000506163 UBE2HP62256 183 aa19.25■□□□□ 0.67
SMN1-204ENST00000506163 ROR1Q01973 937 aa19.25■□□□□ 0.67
SMN1-204ENST00000506163 CTXN3Q4LDR2 81 aa19.25■□□□□ 0.67
SMN1-204ENST00000506163 ZCWPW2Q504Y3 356 aa19.25■□□□□ 0.67
SMN1-204ENST00000506163 GJD3Q8N144 294 aa19.25■□□□□ 0.67
SMN1-204ENST00000506163 HDAC7Q8WUI4 952 aa19.25■□□□□ 0.67
SMN1-204ENST00000506163 CACTINQ8WUQ7 758 aaKnown RBP19.25■□□□□ 0.67
SMN1-204ENST00000506163 CCDC34Q96HJ3 373 aa19.25■□□□□ 0.67
SMN1-204ENST00000506163 PLEKHA4Q9H4M7 779 aa19.25■□□□□ 0.67
SMN1-204ENST00000506163 PRKAG3Q9UGI9 489 aa19.25■□□□□ 0.67
SMN1-204ENST00000506163 H7C4K7 107 aa19.25■□□□□ 0.67
SMN1-204ENST00000506163 KINO60870 393 aaKnown RBP19.25■□□□□ 0.67
SMN1-204ENST00000506163 ZMYND10O75800 440 aa19.25■□□□□ 0.67
SMN1-204ENST00000506163 VNN2O95498 520 aa19.25■□□□□ 0.67
SMN1-204ENST00000506163 DLATP10515 647 aaKnown RBP19.25■□□□□ 0.67
SMN1-204ENST00000506163 TYMPP19971 482 aa19.25■□□□□ 0.67
SMN1-204ENST00000506163 BMP6P22004 513 aa19.25■□□□□ 0.67
SMN1-204ENST00000506163 TAF6P49848 677 aa19.25■□□□□ 0.67
SMN1-204ENST00000506163 ARPP19P56211 112 aa19.25■□□□□ 0.67
SMN1-204ENST00000506163 SURF1Q15526 300 aa19.25■□□□□ 0.67
SMN1-204ENST00000506163 DUOXA2Q1HG44 320 aa19.25■□□□□ 0.67
SMN1-204ENST00000506163 ZNF658Q5TYW1 1059 aaPredicted RBP19.25■□□□□ 0.67
SMN1-204ENST00000506163 ISM2Q6H9L7 571 aa19.25■□□□□ 0.67
SMN1-204ENST00000506163 CES5AQ6NT32 575 aa19.25■□□□□ 0.67
SMN1-204ENST00000506163 WDR49Q8IV35 697 aa19.25■□□□□ 0.67
SMN1-204ENST00000506163 CMASQ8NFW8 434 aaPredicted RBP19.25■□□□□ 0.67
SMN1-204ENST00000506163 SMARCE1Q969G3 411 aa19.25■□□□□ 0.67
SMN1-204ENST00000506163 TMEM209Q96SK2 561 aa19.25■□□□□ 0.67
SMN1-204ENST00000506163 CGRRF1Q99675 332 aa19.25■□□□□ 0.67
SMN1-204ENST00000506163 RTP3Q9BQQ7 232 aa19.25■□□□□ 0.67
SMN1-204ENST00000506163 PHF7Q9BWX1 381 aaPredicted RBP19.25■□□□□ 0.67
SMN1-204ENST00000506163 MAN1B1Q9UKM7 699 aa19.25■□□□□ 0.67
SMN1-204ENST00000506163 KPNA7A9QM74 516 aa19.24■□□□□ 0.67
SMN1-204ENST00000506163 LOC730098B7Z3J9 87 aa19.24■□□□□ 0.67
SMN1-204ENST00000506163 CYB561D2O14569 222 aa19.24■□□□□ 0.67
SMN1-204ENST00000506163 SMC2O95347 1197 aa19.24■□□□□ 0.67
SMN1-204ENST00000506163 SEC24AO95486 1093 aa19.24■□□□□ 0.67
SMN1-204ENST00000506163 CST3P01034 146 aaPredicted RBP19.24■□□□□ 0.67
SMN1-204ENST00000506163 CYP11A1P05108 521 aa19.24■□□□□ 0.67
SMN1-204ENST00000506163 OR4Q2P0C623 313 aa19.24■□□□□ 0.67
SMN1-204ENST00000506163 TMEM191BP0C7N4 346 aa19.24■□□□□ 0.67
SMN1-204ENST00000506163 YWHAHQ04917 246 aaPredicted RBP19.24■□□□□ 0.67
SMN1-204ENST00000506163 ATAT1Q5SQI0 421 aa19.24■□□□□ 0.67
SMN1-204ENST00000506163 WSCD1Q658N2 575 aa19.24■□□□□ 0.67
SMN1-204ENST00000506163 ZNF280DQ6N043 979 aa19.24■□□□□ 0.67
SMN1-204ENST00000506163 TRAPPC11Q7Z392 1133 aa19.24■□□□□ 0.67
SMN1-204ENST00000506163 ZNF461Q8TAF7 563 aa19.24■□□□□ 0.67
SMN1-204ENST00000506163 ITGA11Q9UKX5 1188 aa19.24■□□□□ 0.67
SMN1-204ENST00000506163 TNFRSF10AO00220 468 aa19.23■□□□□ 0.67
SMN1-204ENST00000506163 CALUO43852 315 aaPredicted RBP19.23■□□□□ 0.67
SMN1-204ENST00000506163 KRT19P08727 400 aa19.23■□□□□ 0.67
SMN1-204ENST00000506163 SP100P23497 879 aaPredicted RBP19.23■□□□□ 0.67
SMN1-204ENST00000506163 PMS1P54277 932 aaKnown RBP19.23■□□□□ 0.67
SMN1-204ENST00000506163 DLG4P78352 724 aa19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms