RNA–Protein interactions for RNA: ENST00000505045.1

CDH9-203, Transcript of cadherin 9, humanhuman

TSL 1 (best)

Gene CDH9, Length 1,801 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9-203ENST00000505045 BARX2Q9UMQ3 279 aaPredicted RBP5.42□□□□□ -1.54
CDH9-203ENST00000505045 DENND4AQ7Z401 1863 aa5.42□□□□□ -1.54
CDH9-203ENST00000505045 FAM86C2PA6NEL3 165 aa5.41□□□□□ -1.54
CDH9-203ENST00000505045 PER2O15055 1255 aa5.41□□□□□ -1.54
CDH9-203ENST00000505045 TBX3O15119 743 aa5.41□□□□□ -1.54
CDH9-203ENST00000505045 NEMFO60524 1076 aa5.41□□□□□ -1.54
CDH9-203ENST00000505045 TGFB1P01137 390 aa5.41□□□□□ -1.54
CDH9-203ENST00000505045 RB1P06400 928 aa5.41□□□□□ -1.54
CDH9-203ENST00000505045 STAG3L1P0CL83 205 aa5.41□□□□□ -1.54
CDH9-203ENST00000505045 YWHABP31946 246 aaKnown RBP5.41□□□□□ -1.54
CDH9-203ENST00000505045 ERVFC1P60507 584 aa5.41□□□□□ -1.54
CDH9-203ENST00000505045 FAM189BP81408 668 aa5.41□□□□□ -1.54
CDH9-203ENST00000505045 EMC2Q15006 297 aa5.41□□□□□ -1.54
CDH9-203ENST00000505045 AAK1Q2M2I8 961 aa5.41□□□□□ -1.54
CDH9-203ENST00000505045 EXOSC6Q5RKV6 272 aaKnown RBP5.41□□□□□ -1.54
CDH9-203ENST00000505045 FDX2Q6P4F2 183 aa5.41□□□□□ -1.54
CDH9-203ENST00000505045 BEND4Q6ZU67 534 aa5.41□□□□□ -1.54
CDH9-203ENST00000505045 RBM23Q86U06 439 aaKnown RBP5.41□□□□□ -1.54
CDH9-203ENST00000505045 COLGALT1Q8NBJ5 622 aa5.41□□□□□ -1.54
CDH9-203ENST00000505045 BCL7CQ8WUZ0 217 aaPredicted RBP5.41□□□□□ -1.54
CDH9-203ENST00000505045 P2RX5Q93086 422 aa5.41□□□□□ -1.54
CDH9-203ENST00000505045 ALKBH8Q96BT7 664 aaKnown RBP5.41□□□□□ -1.54
CDH9-203ENST00000505045 CEP170P1Q96L14 293 aa5.41□□□□□ -1.54
CDH9-203ENST00000505045 FAM20AQ96MK3 541 aa5.41□□□□□ -1.54
CDH9-203ENST00000505045 MTMR9Q96QG7 549 aa5.41□□□□□ -1.54
CDH9-203ENST00000505045 RBCK1Q9BYM8 510 aa5.41□□□□□ -1.54
CDH9-203ENST00000505045 DNAJC25Q9H1X3 360 aa5.41□□□□□ -1.54
CDH9-203ENST00000505045 TTC12Q9H892 705 aaPredicted RBP5.41□□□□□ -1.54
CDH9-203ENST00000505045 C1orf112Q9NSG2 853 aa5.41□□□□□ -1.54
CDH9-203ENST00000505045 NRBP2Q9NSY0 501 aa5.41□□□□□ -1.54
CDH9-203ENST00000505045 CLEC1BQ9P126 229 aa5.41□□□□□ -1.54
CDH9-203ENST00000505045 SUCLA2Q9P2R7 463 aaPredicted RBP5.41□□□□□ -1.54
CDH9-203ENST00000505045 PIN4Q9Y237 131 aaKnown RBP5.41□□□□□ -1.54
CDH9-203ENST00000505045 PCDHB7Q9Y5E2 793 aa5.41□□□□□ -1.54
CDH9-203ENST00000505045 COL4A3BPQ9Y5P4 624 aa5.41□□□□□ -1.54
CDH9-203ENST00000505045 VWA8A3KMH1 1905 aa5.41□□□□□ -1.54
CDH9-203ENST00000505045 A0A0U1RQF3 1178 aa5.41□□□□□ -1.54
CDH9-203ENST00000505045 SOWAHDA6NJG2 315 aa5.41□□□□□ -1.54
CDH9-203ENST00000505045 HIDE1A8MVS5 230 aa5.41□□□□□ -1.54
CDH9-203ENST00000505045 NT5C1B-RDH14C9J2C7 533 aa5.41□□□□□ -1.54
CDH9-203ENST00000505045 SART1O43290 800 aaKnown RBP5.41□□□□□ -1.54
CDH9-203ENST00000505045 EIF4EBP3O60516 100 aaPredicted RBP5.41□□□□□ -1.54
CDH9-203ENST00000505045 FGF18O76093 207 aa5.41□□□□□ -1.54
CDH9-203ENST00000505045 SLITRK3O94933 977 aa5.41□□□□□ -1.54
CDH9-203ENST00000505045 EDN1P05305 212 aa5.41□□□□□ -1.54
CDH9-203ENST00000505045 P4HBP07237 508 aaKnown RBP5.41□□□□□ -1.54
CDH9-203ENST00000505045 XBP1P17861 261 aa5.41□□□□□ -1.54
CDH9-203ENST00000505045 ATP2B1P20020 1258 aa5.41□□□□□ -1.54
CDH9-203ENST00000505045 SPINK2P20155 84 aa5.41□□□□□ -1.54
CDH9-203ENST00000505045 TMOD1P28289 359 aa5.41□□□□□ -1.54
CDH9-203ENST00000505045 MCM7P33993 719 aa5.41□□□□□ -1.54
CDH9-203ENST00000505045 NRIP1P48552 1158 aa5.41□□□□□ -1.54
CDH9-203ENST00000505045 POLGP54098 1239 aaPredicted RBP5.41□□□□□ -1.54
CDH9-203ENST00000505045 GSTM4Q03013 218 aa5.41□□□□□ -1.54
CDH9-203ENST00000505045 ZP2Q05996 745 aa5.41□□□□□ -1.54
CDH9-203ENST00000505045 PDE4CQ08493 712 aa5.41□□□□□ -1.54
CDH9-203ENST00000505045 CAPSQ13938 189 aa5.41□□□□□ -1.54
CDH9-203ENST00000505045 EPHA7Q15375 998 aa5.41□□□□□ -1.54
CDH9-203ENST00000505045 CALCRLQ16602 461 aa5.41□□□□□ -1.54
CDH9-203ENST00000505045 UBXN11Q5T124 520 aa5.41□□□□□ -1.54
CDH9-203ENST00000505045 FAM178BQ8IXR5 827 aa5.41□□□□□ -1.54
CDH9-203ENST00000505045 C4orf19Q8IY42 314 aa5.41□□□□□ -1.54
CDH9-203ENST00000505045 LRRC43Q8N309 656 aa5.41□□□□□ -1.54
CDH9-203ENST00000505045 PIGOQ8TEQ8 1089 aa5.41□□□□□ -1.54
CDH9-203ENST00000505045 PRPF31Q8WWY3 499 aaKnown RBP5.41□□□□□ -1.54
CDH9-203ENST00000505045 WASF1Q92558 559 aa5.41□□□□□ -1.54
CDH9-203ENST00000505045 HSD17B14Q9BPX1 270 aa5.41□□□□□ -1.54
CDH9-203ENST00000505045 EIF2AK1Q9BQI3 630 aaKnown RBP5.41□□□□□ -1.54
CDH9-203ENST00000505045 TRIM56Q9BRZ2 755 aaKnown RBP5.41□□□□□ -1.54
CDH9-203ENST00000505045 VN1R3Q9BXE9 311 aa5.41□□□□□ -1.54
CDH9-203ENST00000505045 ELAC1Q9H777 363 aaKnown RBP5.41□□□□□ -1.54
CDH9-203ENST00000505045 ATP6V0A4Q9HBG4 840 aa5.41□□□□□ -1.54
CDH9-203ENST00000505045 NPHS2Q9NP85 383 aa5.41□□□□□ -1.54
CDH9-203ENST00000505045 GPRC5CQ9NQ84 441 aa5.41□□□□□ -1.54
CDH9-203ENST00000505045 AGPAT5Q9NUQ2 364 aa5.41□□□□□ -1.54
CDH9-203ENST00000505045 DNAJB4Q9UDY4 337 aa5.41□□□□□ -1.54
CDH9-203ENST00000505045 LIMCH1Q9UPQ0 1083 aa5.41□□□□□ -1.54
CDH9-203ENST00000505045 RWDD3Q9Y3V2 267 aa5.41□□□□□ -1.54
CDH9-203ENST00000505045 DOCK6Q96HP0 2047 aa5.41□□□□□ -1.54
CDH9-203ENST00000505045 MYH11P35749 1972 aa5.4□□□□□ -1.54
CDH9-203ENST00000505045 F8W810 466 aa5.4□□□□□ -1.54
CDH9-203ENST00000505045 B4GALT5O43286 388 aa5.4□□□□□ -1.54
CDH9-203ENST00000505045 MED24O75448 989 aa5.4□□□□□ -1.54
CDH9-203ENST00000505045 B3GALT4O96024 378 aa5.4□□□□□ -1.54
CDH9-203ENST00000505045 SRGAP2CP0DJJ0 459 aa5.4□□□□□ -1.54
CDH9-203ENST00000505045 HOXA11P31270 313 aaPredicted RBP5.4□□□□□ -1.54
CDH9-203ENST00000505045 SSTR4P31391 388 aa5.4□□□□□ -1.54
CDH9-203ENST00000505045 RBM25P49756 843 aaKnown RBP5.4□□□□□ -1.54
CDH9-203ENST00000505045 RARRES1P49788 294 aa5.4□□□□□ -1.54
CDH9-203ENST00000505045 LAMTOR4Q0VGL1 99 aa5.4□□□□□ -1.54
CDH9-203ENST00000505045 SGO2Q562F6 1265 aa5.4□□□□□ -1.54
CDH9-203ENST00000505045 XKR9Q5GH70 373 aa5.4□□□□□ -1.54
CDH9-203ENST00000505045 SPOUT1Q5T280 376 aaKnown RBP5.4□□□□□ -1.54
CDH9-203ENST00000505045 PLPP4Q5VZY2 271 aa5.4□□□□□ -1.54
CDH9-203ENST00000505045 TWF2Q6IBS0 349 aaKnown RBP5.4□□□□□ -1.54
CDH9-203ENST00000505045 KCNT2Q6UVM3 1135 aa5.4□□□□□ -1.54
CDH9-203ENST00000505045 AGMOQ6ZNB7 445 aa5.4□□□□□ -1.54
CDH9-203ENST00000505045 FERMT3Q86UX7 667 aa5.4□□□□□ -1.54
CDH9-203ENST00000505045 ZNF410Q86VK4 478 aa5.4□□□□□ -1.54
CDH9-203ENST00000505045 CDR2LQ86X02 465 aaPredicted RBP5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms