RNA–Protein interactions for RNA: ENST00000504849.5

RFC1-208, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 873 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-208ENST00000504849 CAMKK1Q8N5S9 505 aa4.74□□□□□ -1.65
RFC1-208ENST00000504849 OR2C3Q8N628 320 aa4.74□□□□□ -1.65
RFC1-208ENST00000504849 CCDC89Q8N998 374 aa4.74□□□□□ -1.65
RFC1-208ENST00000504849 MVB12AQ96EY5 273 aa4.74□□□□□ -1.65
RFC1-208ENST00000504849 LRRC37BQ96QE4 947 aa4.74□□□□□ -1.65
RFC1-208ENST00000504849 ELF4Q99607 663 aaPredicted RBP4.74□□□□□ -1.65
RFC1-208ENST00000504849 CRB3Q9BUF7 120 aa4.74□□□□□ -1.65
RFC1-208ENST00000504849 PCIF1Q9H4Z3 704 aa4.74□□□□□ -1.65
RFC1-208ENST00000504849 DCTPP1Q9H773 170 aa4.74□□□□□ -1.65
RFC1-208ENST00000504849 BARX1Q9HBU1 254 aaPredicted RBP4.74□□□□□ -1.65
RFC1-208ENST00000504849 ACSS2Q9NR19 701 aa4.74□□□□□ -1.65
RFC1-208ENST00000504849 TOMM22Q9NS69 142 aa4.74□□□□□ -1.65
RFC1-208ENST00000504849 DIAPH3Q9NSV4 1193 aa4.74□□□□□ -1.65
RFC1-208ENST00000504849 FNIP2Q9P278 1114 aa4.74□□□□□ -1.65
RFC1-208ENST00000504849 KCNG1Q9UIX4 513 aa4.74□□□□□ -1.65
RFC1-208ENST00000504849 L1RE1Q9UN81 338 aa4.74□□□□□ -1.65
RFC1-208ENST00000504849 MROH1Q8NDA8 1641 aa4.74□□□□□ -1.65
RFC1-208ENST00000504849 PNPLA6Q8IY17 1366 aa4.74□□□□□ -1.65
RFC1-208ENST00000504849 UGGT1Q9NYU2 1555 aa4.74□□□□□ -1.65
RFC1-208ENST00000504849 FAM135BQ49AJ0 1406 aa4.73□□□□□ -1.65
RFC1-208ENST00000504849 SSH2Q76I76 1423 aa4.73□□□□□ -1.65
RFC1-208ENST00000504849 ABCA9Q8IUA7 1624 aa4.73□□□□□ -1.65
RFC1-208ENST00000504849 SYCE3A1L190 88 aa4.73□□□□□ -1.65
RFC1-208ENST00000504849 EPB41L2O43491 1005 aaKnown RBP4.73□□□□□ -1.65
RFC1-208ENST00000504849 B3GALT2O43825 422 aa4.73□□□□□ -1.65
RFC1-208ENST00000504849 HIP1RO75146 1068 aa4.73□□□□□ -1.65
RFC1-208ENST00000504849 FUCA1P04066 466 aa4.73□□□□□ -1.65
RFC1-208ENST00000504849 LCP1P13796 627 aa4.73□□□□□ -1.65
RFC1-208ENST00000504849 PAMP19021 973 aa4.73□□□□□ -1.65
RFC1-208ENST00000504849 SLC9A1P19634 815 aa4.73□□□□□ -1.65
RFC1-208ENST00000504849 MAKP20794 623 aa4.73□□□□□ -1.65
RFC1-208ENST00000504849 PDCP20941 246 aa4.73□□□□□ -1.65
RFC1-208ENST00000504849 C5AR1P21730 350 aa4.73□□□□□ -1.65
RFC1-208ENST00000504849 ENPP1P22413 925 aa4.73□□□□□ -1.65
RFC1-208ENST00000504849 PEX2P28328 305 aa4.73□□□□□ -1.65
RFC1-208ENST00000504849 TNFAIP2Q03169 654 aa4.73□□□□□ -1.65
RFC1-208ENST00000504849 LSAMPQ13449 338 aa4.73□□□□□ -1.65
RFC1-208ENST00000504849 TRIM14Q14142 442 aa4.73□□□□□ -1.65
RFC1-208ENST00000504849 PDCD1Q15116 288 aa4.73□□□□□ -1.65
RFC1-208ENST00000504849 LLGL1Q15334 1064 aa4.73□□□□□ -1.65
RFC1-208ENST00000504849 TAX1BP1Q86VP1 789 aa4.73□□□□□ -1.65
RFC1-208ENST00000504849 ULK2Q8IYT8 1036 aa4.73□□□□□ -1.65
RFC1-208ENST00000504849 CLASRPQ8N2M8 674 aaKnown RBP4.73□□□□□ -1.65
RFC1-208ENST00000504849 ANKRD44Q8N8A2 993 aa4.73□□□□□ -1.65
RFC1-208ENST00000504849 NAXEQ8NCW5 288 aa4.73□□□□□ -1.65
RFC1-208ENST00000504849 NUDT10Q8NFP7 164 aa4.73□□□□□ -1.65
RFC1-208ENST00000504849 NUDT11Q96G61 164 aa4.73□□□□□ -1.65
RFC1-208ENST00000504849 ZC3H10Q96K80 434 aaKnown RBP4.73□□□□□ -1.65
RFC1-208ENST00000504849 PPM1MQ96MI6 270 aa4.73□□□□□ -1.65
RFC1-208ENST00000504849 NEUROD6Q96NK8 337 aa4.73□□□□□ -1.65
RFC1-208ENST00000504849 PRRX2Q99811 253 aa4.73□□□□□ -1.65
RFC1-208ENST00000504849 MYLK2Q9H1R3 596 aa4.73□□□□□ -1.65
RFC1-208ENST00000504849 ZMAT4Q9H898 229 aa4.73□□□□□ -1.65
RFC1-208ENST00000504849 SAGE1Q9NXZ1 904 aa4.73□□□□□ -1.65
RFC1-208ENST00000504849 CLEC1BQ9P126 229 aa4.73□□□□□ -1.65
RFC1-208ENST00000504849 FTSJ1Q9UET6 329 aa4.73□□□□□ -1.65
RFC1-208ENST00000504849 PADI4Q9UM07 663 aa4.73□□□□□ -1.65
RFC1-208ENST00000504849 PCDHA2Q9Y5H9 948 aa4.73□□□□□ -1.65
RFC1-208ENST00000504849 ATP6V1DQ9Y5K8 247 aa4.73□□□□□ -1.65
RFC1-208ENST00000504849 A0A1W2PP64 1363 aa4.73□□□□□ -1.65
RFC1-208ENST00000504849 MROH2AA6NES4 1674 aa4.73□□□□□ -1.65
RFC1-208ENST00000504849 PTPRCP08575 1304 aa4.72□□□□□ -1.65
RFC1-208ENST00000504849 NPHP3-ACAD11A0A0J9YXS1 232 aa4.72□□□□□ -1.65
RFC1-208ENST00000504849 FOXN3O00409 490 aaPredicted RBP4.72□□□□□ -1.65
RFC1-208ENST00000504849 FOXN1O15353 648 aa4.72□□□□□ -1.65
RFC1-208ENST00000504849 MGEA5O60502 916 aa4.72□□□□□ -1.65
RFC1-208ENST00000504849 NDUFS2O75306 463 aa4.72□□□□□ -1.65
RFC1-208ENST00000504849 KRT37O76014 449 aa4.72□□□□□ -1.65
RFC1-208ENST00000504849 UBXN7O94888 489 aa4.72□□□□□ -1.65
RFC1-208ENST00000504849 KIF20AO95235 890 aa4.72□□□□□ -1.65
RFC1-208ENST00000504849 GSPT1P15170 499 aaKnown RBP4.72□□□□□ -1.65
RFC1-208ENST00000504849 PDE6AP16499 860 aa4.72□□□□□ -1.65
RFC1-208ENST00000504849 RPL17P18621 184 aaKnown RBP4.72□□□□□ -1.65
RFC1-208ENST00000504849 PRKAR2BP31323 418 aa4.72□□□□□ -1.65
RFC1-208ENST00000504849 AGFG1P52594 562 aaKnown RBP4.72□□□□□ -1.65
RFC1-208ENST00000504849 SLC5A3P53794 718 aa4.72□□□□□ -1.65
RFC1-208ENST00000504849 SLC16A1P53985 500 aa4.72□□□□□ -1.65
RFC1-208ENST00000504849 EIF5P55010 431 aaKnown RBP4.72□□□□□ -1.65
RFC1-208ENST00000504849 DMTNQ08495 405 aa4.72□□□□□ -1.65
RFC1-208ENST00000504849 GPR19Q15760 415 aa4.72□□□□□ -1.65
RFC1-208ENST00000504849 PGS1Q32NB8 556 aa4.72□□□□□ -1.65
RFC1-208ENST00000504849 TWISTNBQ3B726 338 aaPredicted RBP4.72□□□□□ -1.65
RFC1-208ENST00000504849 TUBB8Q3ZCM7 444 aa4.72□□□□□ -1.65
RFC1-208ENST00000504849 ANO6Q4KMQ2 910 aa4.72□□□□□ -1.65
RFC1-208ENST00000504849 CCDC183Q5T5S1 534 aa4.72□□□□□ -1.65
RFC1-208ENST00000504849 RNF220Q5VTB9 566 aa4.72□□□□□ -1.65
RFC1-208ENST00000504849 PPP4R3AQ6IN85 833 aa4.72□□□□□ -1.65
RFC1-208ENST00000504849 MAMDC4Q6UXC1 1216 aa4.72□□□□□ -1.65
RFC1-208ENST00000504849 GPR155Q7Z3F1 870 aa4.72□□□□□ -1.65
RFC1-208ENST00000504849 GIMAP8Q8ND71 665 aaPredicted RBP4.72□□□□□ -1.65
RFC1-208ENST00000504849 C1orf131Q8NDD1 294 aaKnown RBP4.72□□□□□ -1.65
RFC1-208ENST00000504849 GPT2Q8TD30 523 aa4.72□□□□□ -1.65
RFC1-208ENST00000504849 PIBF1Q8WXW3 757 aa4.72□□□□□ -1.65
RFC1-208ENST00000504849 RIPOR3Q96MK2 946 aa4.72□□□□□ -1.65
RFC1-208ENST00000504849 TBCBQ99426 244 aa4.72□□□□□ -1.65
RFC1-208ENST00000504849 BTBD1Q9H0C5 482 aa4.72□□□□□ -1.65
RFC1-208ENST00000504849 WNT8AQ9H1J5 351 aa4.72□□□□□ -1.65
RFC1-208ENST00000504849 BHMT2Q9H2M3 363 aa4.72□□□□□ -1.65
RFC1-208ENST00000504849 SMOC1Q9H4F8 434 aa4.72□□□□□ -1.65
RFC1-208ENST00000504849 SMURF1Q9HCE7 757 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms