RNA–Protein interactions for RNA: ENST00000504430.5

NIPBL-204, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 2

Gene NIPBL, Length 3,455 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-204ENST00000504430 USP49Q70CQ1 688 aa5.7□□□□□ -1.5
NIPBL-204ENST00000504430 ADGRG6Q86SQ4 1221 aa5.7□□□□□ -1.5
NIPBL-204ENST00000504430 ADGRA1Q86SQ6 560 aa5.7□□□□□ -1.5
NIPBL-204ENST00000504430 C17orf53Q8N3J3 647 aaPredicted RBP5.7□□□□□ -1.5
NIPBL-204ENST00000504430 ARRDC4Q8NCT1 418 aa5.7□□□□□ -1.5
NIPBL-204ENST00000504430 GDAP1Q8TB36 358 aa5.7□□□□□ -1.5
NIPBL-204ENST00000504430 DDX54Q8TDD1 881 aaKnown RBP5.7□□□□□ -1.5
NIPBL-204ENST00000504430 NCSTNQ92542 709 aa5.7□□□□□ -1.5
NIPBL-204ENST00000504430 NSUN4Q96CB9 384 aaKnown RBP5.7□□□□□ -1.5
NIPBL-204ENST00000504430 FAM81BQ96LP2 452 aa5.7□□□□□ -1.5
NIPBL-204ENST00000504430 MFSD14AQ96MC6 490 aa5.7□□□□□ -1.5
NIPBL-204ENST00000504430 PRAM1Q96QH2 718 aa5.7□□□□□ -1.5
NIPBL-204ENST00000504430 EYA3Q99504 573 aa5.7□□□□□ -1.5
NIPBL-204ENST00000504430 NUCKS1Q9H1E3 243 aaKnown RBP5.7□□□□□ -1.5
NIPBL-204ENST00000504430 KCNK4Q9NYG8 393 aa5.7□□□□□ -1.5
NIPBL-204ENST00000504430 SGSM2O43147 1006 aa5.7□□□□□ -1.5
NIPBL-204ENST00000504430 KINO60870 393 aaKnown RBP5.7□□□□□ -1.5
NIPBL-204ENST00000504430 BCAR1P56945 870 aa5.7□□□□□ -1.5
NIPBL-204ENST00000504430 UBE3AQ05086 875 aa5.7□□□□□ -1.5
NIPBL-204ENST00000504430 TAF7Q15545 349 aaPredicted RBP5.7□□□□□ -1.5
NIPBL-204ENST00000504430 H1FNTQ75WM6 255 aaPredicted RBP5.7□□□□□ -1.5
NIPBL-204ENST00000504430 SCML4Q8N228 414 aa5.7□□□□□ -1.5
NIPBL-204ENST00000504430 AGBL5Q8NDL9 886 aa5.7□□□□□ -1.5
NIPBL-204ENST00000504430 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.7□□□□□ -1.5
NIPBL-204ENST00000504430 ANKS1AQ92625 1134 aa5.7□□□□□ -1.5
NIPBL-204ENST00000504430 CCDC140Q96MF4 163 aa5.7□□□□□ -1.5
NIPBL-204ENST00000504430 TRIM5Q9C035 493 aa5.7□□□□□ -1.5
NIPBL-204ENST00000504430 EPS8L2Q9H6S3 715 aa5.7□□□□□ -1.5
NIPBL-204ENST00000504430 CPSF3Q9UKF6 684 aaKnown RBP5.7□□□□□ -1.5
NIPBL-204ENST00000504430 PCDHA1Q9Y5I3 950 aa5.7□□□□□ -1.5
NIPBL-204ENST00000504430 AP1M2Q9Y6Q5 423 aa5.7□□□□□ -1.5
NIPBL-204ENST00000504430 FAM177BA6PVY3 158 aa5.69□□□□□ -1.5
NIPBL-204ENST00000504430 FOXD2O60548 495 aaPredicted RBP5.69□□□□□ -1.5
NIPBL-204ENST00000504430 RNGTTO60942 597 aaKnown RBP5.69□□□□□ -1.5
NIPBL-204ENST00000504430 PIAS2O75928 621 aa5.69□□□□□ -1.5
NIPBL-204ENST00000504430 SLFN11Q7Z7L1 901 aa5.69□□□□□ -1.5
NIPBL-204ENST00000504430 RHOT1Q8IXI2 618 aa5.69□□□□□ -1.5
NIPBL-204ENST00000504430 GPR150Q8NGU9 434 aa5.69□□□□□ -1.5
NIPBL-204ENST00000504430 DNAJB8Q8NHS0 232 aa5.69□□□□□ -1.5
NIPBL-204ENST00000504430 CEP76Q8TAP6 659 aa5.69□□□□□ -1.5
NIPBL-204ENST00000504430 ABHD1Q96SE0 405 aa5.69□□□□□ -1.5
NIPBL-204ENST00000504430 EIF2B3Q9NR50 452 aaKnown RBP5.69□□□□□ -1.5
NIPBL-204ENST00000504430 SNX15Q9NRS6 342 aa5.69□□□□□ -1.5
NIPBL-204ENST00000504430 PCSK1NQ9UHG2 260 aa5.69□□□□□ -1.5
NIPBL-204ENST00000504430 CAMK2AQ9UQM7 478 aa5.69□□□□□ -1.5
NIPBL-204ENST00000504430 PSAT1Q9Y617 370 aa5.69□□□□□ -1.5
NIPBL-204ENST00000504430 A0A088AWK7 358 aa5.69□□□□□ -1.5
NIPBL-204ENST00000504430 F5H0A9 414 aaPredicted RBP5.69□□□□□ -1.5
NIPBL-204ENST00000504430 FCHO1O14526 889 aa5.69□□□□□ -1.5
NIPBL-204ENST00000504430 FANCGO15287 622 aa5.69□□□□□ -1.5
NIPBL-204ENST00000504430 FTCDO95954 541 aa5.69□□□□□ -1.5
NIPBL-204ENST00000504430 MAPK3P27361 379 aaPredicted RBP5.69□□□□□ -1.5
NIPBL-204ENST00000504430 HTRA4P83105 476 aaPredicted RBP5.69□□□□□ -1.5
NIPBL-204ENST00000504430 ACVR2BQ13705 512 aa5.69□□□□□ -1.5
NIPBL-204ENST00000504430 C5orf22Q49AR2 442 aa5.69□□□□□ -1.5
NIPBL-204ENST00000504430 SUSD1Q6UWL2 747 aa5.69□□□□□ -1.5
NIPBL-204ENST00000504430 RGS9BPQ6ZS82 235 aa5.69□□□□□ -1.5
NIPBL-204ENST00000504430 C16orf59Q7L2K0 433 aa5.69□□□□□ -1.5
NIPBL-204ENST00000504430 NLRP10Q86W26 655 aa5.69□□□□□ -1.5
NIPBL-204ENST00000504430 GALNT4Q8N4A0 578 aa5.69□□□□□ -1.5
NIPBL-204ENST00000504430 GLIS1Q8NBF1 620 aa5.69□□□□□ -1.5
NIPBL-204ENST00000504430 RNF125Q96EQ8 232 aa5.69□□□□□ -1.5
NIPBL-204ENST00000504430 SLC39A3Q9BRY0 314 aa5.69□□□□□ -1.5
NIPBL-204ENST00000504430 MYL10Q9BUA6 226 aa5.69□□□□□ -1.5
NIPBL-204ENST00000504430 ADAM7Q9H2U9 754 aa5.69□□□□□ -1.5
NIPBL-204ENST00000504430 TAF1DQ9H5J8 278 aaPredicted RBP5.69□□□□□ -1.5
NIPBL-204ENST00000504430 NDFIP2Q9NV92 336 aa5.69□□□□□ -1.5
NIPBL-204ENST00000504430 RASAL2Q9UJF2 1139 aa5.69□□□□□ -1.5
NIPBL-204ENST00000504430 MOSPD1Q9UJG1 213 aa5.69□□□□□ -1.5
NIPBL-204ENST00000504430 PTBP2Q9UKA9 531 aaKnown RBP5.69□□□□□ -1.5
NIPBL-204ENST00000504430 SNX8Q9Y5X2 465 aa5.69□□□□□ -1.5
NIPBL-204ENST00000504430 A4D1N5 150 aa5.69□□□□□ -1.5
NIPBL-204ENST00000504430 FAM47E-STBD1D6RA91 191 aa5.69□□□□□ -1.5
NIPBL-204ENST00000504430 MAN2B1O00754 1011 aa5.69□□□□□ -1.5
NIPBL-204ENST00000504430 KRT38O76015 456 aa5.69□□□□□ -1.5
NIPBL-204ENST00000504430 THP07101 528 aa5.69□□□□□ -1.5
NIPBL-204ENST00000504430 TOP1P11387 765 aaKnown RBP5.69□□□□□ -1.5
NIPBL-204ENST00000504430 RARGP13631 454 aa5.69□□□□□ -1.5
NIPBL-204ENST00000504430 IDUAP35475 653 aa5.69□□□□□ -1.5
NIPBL-204ENST00000504430 SULT1E1P49888 294 aa5.69□□□□□ -1.5
NIPBL-204ENST00000504430 ALDH3A2P51648 485 aa5.69□□□□□ -1.5
NIPBL-204ENST00000504430 ERVK-24P63145 666 aa5.69□□□□□ -1.5
NIPBL-204ENST00000504430 FAM189BP81408 668 aa5.69□□□□□ -1.5
NIPBL-204ENST00000504430 EIF2B5Q13144 721 aaKnown RBP5.69□□□□□ -1.5
NIPBL-204ENST00000504430 SPRYD7Q5W111 196 aa5.69□□□□□ -1.5
NIPBL-204ENST00000504430 C8orf86Q6ZUL3 223 aa5.69□□□□□ -1.5
NIPBL-204ENST00000504430 CNTROBQ8N137 903 aa5.69□□□□□ -1.5
NIPBL-204ENST00000504430 SFRP1Q8N474 314 aa5.69□□□□□ -1.5
NIPBL-204ENST00000504430 SCAMP5Q8TAC9 235 aa5.69□□□□□ -1.5
NIPBL-204ENST00000504430 CCDC114Q96M63 670 aa5.69□□□□□ -1.5
NIPBL-204ENST00000504430 NLRP4Q96MN2 994 aa5.69□□□□□ -1.5
NIPBL-204ENST00000504430 HGH1Q9BTY7 390 aa5.69□□□□□ -1.5
NIPBL-204ENST00000504430 HOMER3Q9NSC5 361 aa5.69□□□□□ -1.5
NIPBL-204ENST00000504430 TBCCD1Q9NVR7 557 aa5.69□□□□□ -1.5
NIPBL-204ENST00000504430 AJAP1Q9UKB5 411 aaPredicted RBP5.69□□□□□ -1.5
NIPBL-204ENST00000504430 PDHBP11177 359 aa5.68□□□□□ -1.5
NIPBL-204ENST00000504430 PAMP19021 973 aa5.68□□□□□ -1.5
NIPBL-204ENST00000504430 BAG6P46379 1132 aa5.68□□□□□ -1.5
NIPBL-204ENST00000504430 FOXO1Q12778 655 aa5.68□□□□□ -1.5
NIPBL-204ENST00000504430 LAPTM5Q13571 262 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms