RNA–Protein interactions for RNA: ENST00000504318.5

PDLIM7-211, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 597 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-211ENST00000504318 STK38Q15208 465 aa15.19■□□□□ 0.02
PDLIM7-211ENST00000504318 CTXN3Q4LDR2 81 aa15.19■□□□□ 0.02
PDLIM7-211ENST00000504318 TPGS2Q68CL5 300 aa15.19■□□□□ 0.02
PDLIM7-211ENST00000504318 ADALQ6DHV7 355 aa15.19■□□□□ 0.02
PDLIM7-211ENST00000504318 SLFN12LQ6IEE8 588 aa15.19■□□□□ 0.02
PDLIM7-211ENST00000504318 ZNF280DQ6N043 979 aa15.19■□□□□ 0.02
PDLIM7-211ENST00000504318 PARM1Q6UWI2 310 aa15.19■□□□□ 0.02
PDLIM7-211ENST00000504318 SUGP1Q8IWZ8 645 aaKnown RBP15.19■□□□□ 0.02
PDLIM7-211ENST00000504318 NPAS3Q8IXF0 933 aa15.19■□□□□ 0.02
PDLIM7-211ENST00000504318 PDILTQ8N807 584 aa15.19■□□□□ 0.02
PDLIM7-211ENST00000504318 ST13P5Q8NFI4 369 aaPredicted RBP15.19■□□□□ 0.02
PDLIM7-211ENST00000504318 ASB7Q9H672 318 aa15.19■□□□□ 0.02
PDLIM7-211ENST00000504318 TBC1D7Q9P0N9 293 aa15.19■□□□□ 0.02
PDLIM7-211ENST00000504318 AFF4Q9UHB7 1163 aaKnown RBP15.19■□□□□ 0.02
PDLIM7-211ENST00000504318 TIMM13Q9Y5L4 95 aaPredicted RBP15.19■□□□□ 0.02
PDLIM7-211ENST00000504318 ZFP37Q9Y6Q3 630 aaPredicted RBP15.19■□□□□ 0.02
PDLIM7-211ENST00000504318 XYLBO75191 536 aa15.18■□□□□ 0.02
PDLIM7-211ENST00000504318 SRFP11831 508 aa15.18■□□□□ 0.02
PDLIM7-211ENST00000504318 TYMPP19971 482 aa15.18■□□□□ 0.02
PDLIM7-211ENST00000504318 TXLNAP40222 546 aa15.18■□□□□ 0.02
PDLIM7-211ENST00000504318 PABPC1LQ4VXU2 614 aaKnown RBP15.18■□□□□ 0.02
PDLIM7-211ENST00000504318 RNF19BQ6ZMZ0 732 aa15.18■□□□□ 0.02
PDLIM7-211ENST00000504318 APPL2Q8NEU8 664 aa15.18■□□□□ 0.02
PDLIM7-211ENST00000504318 TMEM209Q96SK2 561 aa15.18■□□□□ 0.02
PDLIM7-211ENST00000504318 RTP3Q9BQQ7 232 aa15.18■□□□□ 0.02
PDLIM7-211ENST00000504318 LRRC3Q9BY71 257 aa15.18■□□□□ 0.02
PDLIM7-211ENST00000504318 TRIM9Q9C026 710 aa15.18■□□□□ 0.02
PDLIM7-211ENST00000504318 TNMDQ9H2S6 317 aa15.18■□□□□ 0.02
PDLIM7-211ENST00000504318 MRPL44Q9H9J2 332 aaKnown RBP15.18■□□□□ 0.02
PDLIM7-211ENST00000504318 SLC2A4RGQ9NR83 387 aa15.18■□□□□ 0.02
PDLIM7-211ENST00000504318 CEP72Q9P209 647 aa15.18■□□□□ 0.02
PDLIM7-211ENST00000504318 WNT16Q9UBV4 365 aa15.18■□□□□ 0.02
PDLIM7-211ENST00000504318 KCNH3Q9ULD8 1083 aa15.18■□□□□ 0.02
PDLIM7-211ENST00000504318 ZDHHC9Q9Y397 364 aa15.18■□□□□ 0.02
PDLIM7-211ENST00000504318 INSL5Q9Y5Q6 135 aa15.18■□□□□ 0.02
PDLIM7-211ENST00000504318 PI15O43692 258 aa15.17■□□□□ 0.02
PDLIM7-211ENST00000504318 CUTAO60888 179 aa15.17■□□□□ 0.02
PDLIM7-211ENST00000504318 CYP11A1P05108 521 aa15.17■□□□□ 0.02
PDLIM7-211ENST00000504318 OR4Q2P0C623 313 aa15.17■□□□□ 0.02
PDLIM7-211ENST00000504318 FCARP24071 287 aa15.17■□□□□ 0.02
PDLIM7-211ENST00000504318 CLCN5P51795 746 aa15.17■□□□□ 0.02
PDLIM7-211ENST00000504318 NUBP1P53384 320 aa15.17■□□□□ 0.02
PDLIM7-211ENST00000504318 EPHA5P54756 1037 aa15.17■□□□□ 0.02
PDLIM7-211ENST00000504318 YWHAHQ04917 246 aaPredicted RBP15.17■□□□□ 0.02
PDLIM7-211ENST00000504318 TMEM132DQ14C87 1099 aa15.17■□□□□ 0.02
PDLIM7-211ENST00000504318 FOXD4L5Q5VV16 416 aaPredicted RBP15.17■□□□□ 0.02
PDLIM7-211ENST00000504318 ASTLQ6HA08 431 aaPredicted RBP15.17■□□□□ 0.02
PDLIM7-211ENST00000504318 EPM2AIP1Q7L775 607 aaPredicted RBP15.17■□□□□ 0.02
PDLIM7-211ENST00000504318 HSCBQ8IWL3 235 aa15.17■□□□□ 0.02
PDLIM7-211ENST00000504318 BRSK2Q8IWQ3 736 aa15.17■□□□□ 0.02
PDLIM7-211ENST00000504318 OR10T2Q8NGX3 314 aa15.17■□□□□ 0.02
PDLIM7-211ENST00000504318 FOXD4L4Q8WXT5 416 aaPredicted RBP15.17■□□□□ 0.02
PDLIM7-211ENST00000504318 HPS3Q969F9 1004 aa15.17■□□□□ 0.02
PDLIM7-211ENST00000504318 TCEAL4Q96EI5 215 aa15.17■□□□□ 0.02
PDLIM7-211ENST00000504318 FAM84AQ96KN4 292 aa15.17■□□□□ 0.02
PDLIM7-211ENST00000504318 SENP8Q96LD8 212 aa15.17■□□□□ 0.02
PDLIM7-211ENST00000504318 ZNF396Q96N95 335 aaPredicted RBP15.17■□□□□ 0.02
PDLIM7-211ENST00000504318 ACCSQ96QU6 501 aa15.17■□□□□ 0.02
PDLIM7-211ENST00000504318 CBWD1Q9BRT8 395 aa15.17■□□□□ 0.02
PDLIM7-211ENST00000504318 DNAJC25Q9H1X3 360 aa15.17■□□□□ 0.02
PDLIM7-211ENST00000504318 PANK4Q9NVE7 773 aa15.17■□□□□ 0.02
PDLIM7-211ENST00000504318 MAFFQ9ULX9 164 aa15.17■□□□□ 0.02
PDLIM7-211ENST00000504318 PCDHA7Q9UN72 937 aa15.17■□□□□ 0.02
PDLIM7-211ENST00000504318 SHISA7A6NL88 538 aa15.16■□□□□ 0.02
PDLIM7-211ENST00000504318 XPOTO43592 962 aaKnown RBP15.16■□□□□ 0.02
PDLIM7-211ENST00000504318 GALR2O43603 387 aaPredicted RBP15.16■□□□□ 0.02
PDLIM7-211ENST00000504318 PRPF6O94906 941 aaKnown RBP15.16■□□□□ 0.02
PDLIM7-211ENST00000504318 GCNT3O95395 438 aa15.16■□□□□ 0.02
PDLIM7-211ENST00000504318 CEBPBP17676 345 aa15.16■□□□□ 0.02
PDLIM7-211ENST00000504318 AOC1P19801 751 aa15.16■□□□□ 0.02
PDLIM7-211ENST00000504318 GARTP22102 1010 aa15.16■□□□□ 0.02
PDLIM7-211ENST00000504318 ADCY1Q08828 1119 aa15.16■□□□□ 0.02
PDLIM7-211ENST00000504318 GPR17Q13304 367 aa15.16■□□□□ 0.02
PDLIM7-211ENST00000504318 GPR152Q8TDT2 470 aa15.16■□□□□ 0.02
PDLIM7-211ENST00000504318 POMGNT1Q8WZA1 660 aa15.16■□□□□ 0.02
PDLIM7-211ENST00000504318 SAAL1Q96ER3 474 aa15.16■□□□□ 0.02
PDLIM7-211ENST00000504318 PRRX2Q99811 253 aa15.16■□□□□ 0.02
PDLIM7-211ENST00000504318 CUEDC2Q9H467 287 aa15.16■□□□□ 0.02
PDLIM7-211ENST00000504318 CYP4F11Q9HBI6 524 aa15.16■□□□□ 0.02
PDLIM7-211ENST00000504318 VPS13AQ96RL7 3174 aa15.16■□□□□ 0.02
PDLIM7-211ENST00000504318 NCANO14594 1321 aa15.16■□□□□ 0.02
PDLIM7-211ENST00000504318 MICAL2O94851 1124 aa15.15■□□□□ 0.02
PDLIM7-211ENST00000504318 CFHP08603 1231 aa15.15■□□□□ 0.02
PDLIM7-211ENST00000504318 PDIA4P13667 645 aaKnown RBP15.15■□□□□ 0.02
PDLIM7-211ENST00000504318 IDEP14735 1019 aa15.15■□□□□ 0.02
PDLIM7-211ENST00000504318 PTPN5P54829 565 aa15.15■□□□□ 0.02
PDLIM7-211ENST00000504318 ARPP19P56211 112 aa15.15■□□□□ 0.02
PDLIM7-211ENST00000504318 ALCAMQ13740 583 aa15.15■□□□□ 0.02
PDLIM7-211ENST00000504318 MYBPC2Q14324 1141 aa15.15■□□□□ 0.02
PDLIM7-211ENST00000504318 POSTNQ15063 836 aa15.15■□□□□ 0.02
PDLIM7-211ENST00000504318 RESP18Q5W5W9 173 aa15.15■□□□□ 0.02
PDLIM7-211ENST00000504318 OVOS1Q6IE37 1185 aa15.15■□□□□ 0.02
PDLIM7-211ENST00000504318 NT5DC4Q86YG4 428 aa15.15■□□□□ 0.02
PDLIM7-211ENST00000504318 TMC8Q8IU68 726 aa15.15■□□□□ 0.02
PDLIM7-211ENST00000504318 HS6ST3Q8IZP7 471 aa15.15■□□□□ 0.02
PDLIM7-211ENST00000504318 SIX5Q8N196 739 aa15.15■□□□□ 0.02
PDLIM7-211ENST00000504318 TTC9BQ8N6N2 239 aa15.15■□□□□ 0.02
PDLIM7-211ENST00000504318 ING5Q8WYH8 240 aa15.15■□□□□ 0.02
PDLIM7-211ENST00000504318 FAM212AQ96EL1 285 aa15.15■□□□□ 0.02
PDLIM7-211ENST00000504318 CHAMP1Q96JM3 812 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms