RNA–Protein interactions for RNA: ENST00000502781.5

LSM6-202, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 1,352 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-202ENST00000502781 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP27.09■■□□□ 1.93
LSM6-202ENST00000502781 TULP1O00294 542 aaPredicted RBP27.09■■□□□ 1.93
LSM6-202ENST00000502781 TEX28O15482 410 aa27.09■■□□□ 1.93
LSM6-202ENST00000502781 CLASP2O75122 1294 aaKnown RBP27.09■■□□□ 1.93
LSM6-202ENST00000502781 VAMP7P51809 220 aa27.09■■□□□ 1.93
LSM6-202ENST00000502781 BFSP1Q12934 665 aa27.09■■□□□ 1.93
LSM6-202ENST00000502781 DPCR1Q3MIW9 517 aa27.09■■□□□ 1.93
LSM6-202ENST00000502781 PRSS55Q6UWB4 352 aaPredicted RBP27.09■■□□□ 1.93
LSM6-202ENST00000502781 USP37Q86T82 979 aa27.09■■□□□ 1.93
LSM6-202ENST00000502781 ZNF560Q96MR9 790 aa27.09■■□□□ 1.93
LSM6-202ENST00000502781 CEP63Q96MT8 703 aa27.09■■□□□ 1.93
LSM6-202ENST00000502781 EMILIN2Q9BXX0 1053 aa27.09■■□□□ 1.93
LSM6-202ENST00000502781 SCN1AP35498 2009 aa27.08■■□□□ 1.93
LSM6-202ENST00000502781 C4BPAP04003 597 aaKnown RBP27.08■■□□□ 1.93
LSM6-202ENST00000502781 EPB41P11171 864 aaKnown RBP27.08■■□□□ 1.93
LSM6-202ENST00000502781 CREMQ03060 361 aa27.08■■□□□ 1.93
LSM6-202ENST00000502781 TMEM184AQ6ZMB5 413 aa27.08■■□□□ 1.93
LSM6-202ENST00000502781 ANKS3Q6ZW76 656 aa27.08■■□□□ 1.93
LSM6-202ENST00000502781 FILIP1Q7Z7B0 1213 aa27.08■■□□□ 1.93
LSM6-202ENST00000502781 VN1R2Q8NFZ6 395 aa27.08■■□□□ 1.93
LSM6-202ENST00000502781 SENP8Q96LD8 212 aa27.08■■□□□ 1.93
LSM6-202ENST00000502781 IGFLR1Q9H665 355 aa27.08■■□□□ 1.93
LSM6-202ENST00000502781 MTRRQ9UBK8 725 aa27.08■■□□□ 1.93
LSM6-202ENST00000502781 KPNA7A9QM74 516 aa27.07■■□□□ 1.92
LSM6-202ENST00000502781 LINC01565O15544 149 aa27.07■■□□□ 1.92
LSM6-202ENST00000502781 TBC1D4O60343 1298 aa27.07■■□□□ 1.92
LSM6-202ENST00000502781 GLP2RO95838 553 aa27.07■■□□□ 1.92
LSM6-202ENST00000502781 TYMPP19971 482 aa27.07■■□□□ 1.92
LSM6-202ENST00000502781 PTMSP20962 102 aa27.07■■□□□ 1.92
LSM6-202ENST00000502781 CA8P35219 290 aa27.07■■□□□ 1.92
LSM6-202ENST00000502781 STX17P56962 302 aa27.07■■□□□ 1.92
LSM6-202ENST00000502781 PSMD5Q16401 504 aa27.07■■□□□ 1.92
LSM6-202ENST00000502781 KLHL40Q2TBA0 621 aa27.07■■□□□ 1.92
LSM6-202ENST00000502781 VARS2Q5ST30 1063 aaKnown RBP27.07■■□□□ 1.92
LSM6-202ENST00000502781 C15orf39Q6ZRI6 1047 aa27.07■■□□□ 1.92
LSM6-202ENST00000502781 APPL2Q8NEU8 664 aa27.07■■□□□ 1.92
LSM6-202ENST00000502781 CLSTN3Q9BQT9 956 aa27.07■■□□□ 1.92
LSM6-202ENST00000502781 BACE2Q9Y5Z0 518 aa27.07■■□□□ 1.92
LSM6-202ENST00000502781 CST3P01034 146 aaPredicted RBP27.06■■□□□ 1.92
LSM6-202ENST00000502781 KRT19P08727 400 aa27.06■■□□□ 1.92
LSM6-202ENST00000502781 KRT13P13646 458 aa27.06■■□□□ 1.92
LSM6-202ENST00000502781 LTBRP36941 435 aa27.06■■□□□ 1.92
LSM6-202ENST00000502781 SKIV2LQ15477 1246 aaKnown RBP27.06■■□□□ 1.92
LSM6-202ENST00000502781 ZACNQ401N2 412 aa27.06■■□□□ 1.92
LSM6-202ENST00000502781 SV2CQ496J9 727 aa27.06■■□□□ 1.92
LSM6-202ENST00000502781 TDRD10Q5VZ19 366 aaKnown RBP27.06■■□□□ 1.92
LSM6-202ENST00000502781 SLC22A17Q8WUG5 538 aa27.06■■□□□ 1.92
LSM6-202ENST00000502781 COG5Q9UP83 839 aa27.06■■□□□ 1.92
LSM6-202ENST00000502781 REV3LO60673 3130 aa27.05■■□□□ 1.92
LSM6-202ENST00000502781 OAZ2O95190 189 aa27.05■■□□□ 1.92
LSM6-202ENST00000502781 C1RP00736 705 aa27.05■■□□□ 1.92
LSM6-202ENST00000502781 CYP11A1P05108 521 aa27.05■■□□□ 1.92
LSM6-202ENST00000502781 ADH1AP07327 375 aa27.05■■□□□ 1.92
LSM6-202ENST00000502781 ERCC5P28715 1186 aaPredicted RBP27.05■■□□□ 1.92
LSM6-202ENST00000502781 NDUFV1P49821 464 aa27.05■■□□□ 1.92
LSM6-202ENST00000502781 CT47A1Q5JQC4 288 aaPredicted RBP27.05■■□□□ 1.92
LSM6-202ENST00000502781 DSTYKQ6XUX3 929 aa27.05■■□□□ 1.92
LSM6-202ENST00000502781 PPFIBP1Q86W92 1011 aa27.05■■□□□ 1.92
LSM6-202ENST00000502781 HLA-CQ95604 372 aa27.05■■□□□ 1.92
LSM6-202ENST00000502781 UBE2ZQ9H832 354 aaPredicted RBP27.05■■□□□ 1.92
LSM6-202ENST00000502781 PRDM6Q9NQX0 595 aa27.05■■□□□ 1.92
LSM6-202ENST00000502781 GDAP2Q9NXN4 497 aa27.05■■□□□ 1.92
LSM6-202ENST00000502781 HCFC2Q9Y5Z7 792 aa27.05■■□□□ 1.92
LSM6-202ENST00000502781 STAU1O95793 577 aaKnown RBP27.04■■□□□ 1.92
LSM6-202ENST00000502781 ODC1P11926 461 aa27.04■■□□□ 1.92
LSM6-202ENST00000502781 RPL17P18621 184 aaKnown RBP27.04■■□□□ 1.92
LSM6-202ENST00000502781 CLCN4P51793 760 aa27.04■■□□□ 1.92
LSM6-202ENST00000502781 RBM10P98175 930 aaKnown RBP27.04■■□□□ 1.92
LSM6-202ENST00000502781 PPP3CAQ08209 521 aa27.04■■□□□ 1.92
LSM6-202ENST00000502781 RSPO2Q6UXX9 243 aaPredicted RBP27.04■■□□□ 1.92
LSM6-202ENST00000502781 SV2AQ7L0J3 742 aa27.04■■□□□ 1.92
LSM6-202ENST00000502781 FRMD5Q7Z6J6 570 aa27.04■■□□□ 1.92
LSM6-202ENST00000502781 CLDND1Q9NY35 253 aa27.04■■□□□ 1.92
LSM6-202ENST00000502781 DACH1Q9UI36 760 aa27.04■■□□□ 1.92
LSM6-202ENST00000502781 ARHGEF37A1IGU5 675 aa27.03■■□□□ 1.92
LSM6-202ENST00000502781 TBX10O75333 385 aa27.03■■□□□ 1.92
LSM6-202ENST00000502781 VNN1O95497 513 aa27.03■■□□□ 1.92
LSM6-202ENST00000502781 TRIM49P0CI25 452 aa27.03■■□□□ 1.92
LSM6-202ENST00000502781 TRIM49CP0CI26 452 aa27.03■■□□□ 1.92
LSM6-202ENST00000502781 KLRC2P26717 231 aa27.03■■□□□ 1.92
LSM6-202ENST00000502781 GTF2H1P32780 548 aa27.03■■□□□ 1.92
LSM6-202ENST00000502781 MYO1EQ12965 1108 aa27.03■■□□□ 1.92
LSM6-202ENST00000502781 SLC8B1Q6J4K2 584 aa27.03■■□□□ 1.92
LSM6-202ENST00000502781 CAVIN1Q6NZI2 390 aaKnown RBP27.03■■□□□ 1.92
LSM6-202ENST00000502781 LIMS2Q7Z4I7 341 aa27.03■■□□□ 1.92
LSM6-202ENST00000502781 HPDLQ96IR7 371 aa27.03■■□□□ 1.92
LSM6-202ENST00000502781 XYLT2Q9H1B5 865 aa27.03■■□□□ 1.92
LSM6-202ENST00000502781 METTL14Q9HCE5 456 aaKnown RBP27.03■■□□□ 1.92
LSM6-202ENST00000502781 TIMM13Q9Y5L4 95 aaPredicted RBP27.03■■□□□ 1.92
LSM6-202ENST00000502781 PRUNE2Q8WUY3 3088 aa27.03■■□□□ 1.92
LSM6-202ENST00000502781 H7C4K7 107 aa27.02■■□□□ 1.92
LSM6-202ENST00000502781 CYB561D2O14569 222 aa27.02■■□□□ 1.92
LSM6-202ENST00000502781 ADAM12O43184 909 aa27.02■■□□□ 1.92
LSM6-202ENST00000502781 MARSP56192 900 aaKnown RBP27.02■■□□□ 1.92
LSM6-202ENST00000502781 YWHAHQ04917 246 aaPredicted RBP27.02■■□□□ 1.92
LSM6-202ENST00000502781 DLX2Q07687 328 aaPredicted RBP27.02■■□□□ 1.92
LSM6-202ENST00000502781 LILRA6Q6PI73 481 aa27.02■■□□□ 1.92
LSM6-202ENST00000502781 SRRTQ9BXP5 876 aaKnown RBP27.02■■□□□ 1.92
LSM6-202ENST00000502781 VRTNQ9H8Y1 702 aa27.02■■□□□ 1.92
LSM6-202ENST00000502781 CLEC1BQ9P126 229 aa27.02■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms