RNA–Protein interactions for RNA: ENST00000502313.1

HMGB1P21-201, Transcript of high mobility group box 1 pseudogene 21, humanhuman

BASIC

Gene HMGB1P21, Length 581 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P21-201ENST00000502313 MST1RQ04912 1400 aa4.85□□□□□ -1.63
HMGB1P21-201ENST00000502313 ADGRL3Q9HAR2 1447 aa4.85□□□□□ -1.63
HMGB1P21-201ENST00000502313 KIF1BO60333 1816 aa4.84□□□□□ -1.63
HMGB1P21-201ENST00000502313 LRPPRCP42704 1394 aaKnown RBP4.84□□□□□ -1.63
HMGB1P21-201ENST00000502313 PRAMEF25A6NGN4 478 aa4.84□□□□□ -1.63
HMGB1P21-201ENST00000502313 FADS2P1A8MWK0 482 aa4.84□□□□□ -1.63
HMGB1P21-201ENST00000502313 F5H0A9 414 aaPredicted RBP4.84□□□□□ -1.63
HMGB1P21-201ENST00000502313 H7C0S8 307 aa4.84□□□□□ -1.63
HMGB1P21-201ENST00000502313 HMMRO75330 724 aa4.84□□□□□ -1.63
HMGB1P21-201ENST00000502313 GDF11O95390 407 aa4.84□□□□□ -1.63
HMGB1P21-201ENST00000502313 HSPA4LO95757 839 aa4.84□□□□□ -1.63
HMGB1P21-201ENST00000502313 STARD3NLO95772 234 aa4.84□□□□□ -1.63
HMGB1P21-201ENST00000502313 FTLP02792 175 aaPredicted RBP4.84□□□□□ -1.63
HMGB1P21-201ENST00000502313 CYP17A1P05093 508 aa4.84□□□□□ -1.63
HMGB1P21-201ENST00000502313 ZSCAN22P10073 491 aaPredicted RBP4.84□□□□□ -1.63
HMGB1P21-201ENST00000502313 RARBP10826 455 aa4.84□□□□□ -1.63
HMGB1P21-201ENST00000502313 HSPA1LP34931 641 aa4.84□□□□□ -1.63
HMGB1P21-201ENST00000502313 GJA4P35212 333 aa4.84□□□□□ -1.63
HMGB1P21-201ENST00000502313 HK2P52789 917 aa4.84□□□□□ -1.63
HMGB1P21-201ENST00000502313 CDK17Q00537 523 aa4.84□□□□□ -1.63
HMGB1P21-201ENST00000502313 DSC2Q02487 901 aa4.84□□□□□ -1.63
HMGB1P21-201ENST00000502313 FOXO1Q12778 655 aa4.84□□□□□ -1.63
HMGB1P21-201ENST00000502313 MAP3K12Q12852 859 aa4.84□□□□□ -1.63
HMGB1P21-201ENST00000502313 TRPC3Q13507 836 aa4.84□□□□□ -1.63
HMGB1P21-201ENST00000502313 MOGSQ13724 837 aa4.84□□□□□ -1.63
HMGB1P21-201ENST00000502313 TMEM132BQ14DG7 1078 aa4.84□□□□□ -1.63
HMGB1P21-201ENST00000502313 PITRM1Q5JRX3 1037 aa4.84□□□□□ -1.63
HMGB1P21-201ENST00000502313 STEAP3Q658P3 488 aa4.84□□□□□ -1.63
HMGB1P21-201ENST00000502313 INTS5Q6P9B9 1019 aaKnown RBP4.84□□□□□ -1.63
HMGB1P21-201ENST00000502313 HHIPL2Q6UWX4 724 aa4.84□□□□□ -1.63
HMGB1P21-201ENST00000502313 RASGRP2Q7LDG7 609 aa4.84□□□□□ -1.63
HMGB1P21-201ENST00000502313 SLCO6A1Q86UG4 719 aa4.84□□□□□ -1.63
HMGB1P21-201ENST00000502313 CXorf67Q86X51 503 aaPredicted RBP4.84□□□□□ -1.63
HMGB1P21-201ENST00000502313 RIOX2Q8IUF8 465 aa4.84□□□□□ -1.63
HMGB1P21-201ENST00000502313 TMEM151AQ8N4L1 468 aa4.84□□□□□ -1.63
HMGB1P21-201ENST00000502313 TCP11L2Q8N4U5 519 aa4.84□□□□□ -1.63
HMGB1P21-201ENST00000502313 PIP4K2CQ8TBX8 421 aa4.84□□□□□ -1.63
HMGB1P21-201ENST00000502313 MGARPQ8TDB4 240 aa4.84□□□□□ -1.63
HMGB1P21-201ENST00000502313 STYXQ8WUJ0 223 aa4.84□□□□□ -1.63
HMGB1P21-201ENST00000502313 RFFLQ8WZ73 363 aa4.84□□□□□ -1.63
HMGB1P21-201ENST00000502313 HERVK_113Q902F9 699 aa4.84□□□□□ -1.63
HMGB1P21-201ENST00000502313 RUBCNQ92622 972 aa4.84□□□□□ -1.63
HMGB1P21-201ENST00000502313 ANKS1AQ92625 1134 aa4.84□□□□□ -1.63
HMGB1P21-201ENST00000502313 ZUFSPQ96AP4 578 aa4.84□□□□□ -1.63
HMGB1P21-201ENST00000502313 KCNC2Q96PR1 638 aa4.84□□□□□ -1.63
HMGB1P21-201ENST00000502313 SLF1Q9BQI6 1058 aa4.84□□□□□ -1.63
HMGB1P21-201ENST00000502313 PYM1Q9BRP8 204 aaKnown RBP4.84□□□□□ -1.63
HMGB1P21-201ENST00000502313 SIL1Q9H173 461 aa4.84□□□□□ -1.63
HMGB1P21-201ENST00000502313 C19orf44Q9H6X5 657 aa4.84□□□□□ -1.63
HMGB1P21-201ENST00000502313 RIC8BQ9NVN3 520 aa4.84□□□□□ -1.63
HMGB1P21-201ENST00000502313 CPNE7Q9UBL6 633 aa4.84□□□□□ -1.63
HMGB1P21-201ENST00000502313 FEZ2Q9UHY8 353 aaPredicted RBP4.84□□□□□ -1.63
HMGB1P21-201ENST00000502313 SCAF8Q9UPN6 1271 aaKnown RBP4.84□□□□□ -1.63
HMGB1P21-201ENST00000502313 SIPA1L2Q9P2F8 1722 aaPredicted RBP4.83□□□□□ -1.64
HMGB1P21-201ENST00000502313 AHDC1Q5TGY3 1603 aaPredicted RBP4.83□□□□□ -1.64
HMGB1P21-201ENST00000502313 DLC1Q96QB1 1528 aa4.83□□□□□ -1.64
HMGB1P21-201ENST00000502313 A0A1W2PPC4 97 aa4.83□□□□□ -1.64
HMGB1P21-201ENST00000502313 TCRBV5S4A2TA0A5A2 114 aa4.83□□□□□ -1.64
HMGB1P21-201ENST00000502313 FITM1A5D6W6 292 aa4.83□□□□□ -1.64
HMGB1P21-201ENST00000502313 LRRC14BA6NHZ5 514 aa4.83□□□□□ -1.64
HMGB1P21-201ENST00000502313 FOXN3O00409 490 aaPredicted RBP4.83□□□□□ -1.64
HMGB1P21-201ENST00000502313 RTCAO00442 366 aaKnown RBP4.83□□□□□ -1.64
HMGB1P21-201ENST00000502313 SYT5O00445 386 aa4.83□□□□□ -1.64
HMGB1P21-201ENST00000502313 HGSO14964 777 aaPredicted RBP4.83□□□□□ -1.64
HMGB1P21-201ENST00000502313 TOM1O60784 492 aa4.83□□□□□ -1.64
HMGB1P21-201ENST00000502313 RTN3O95197 1032 aaPredicted RBP4.83□□□□□ -1.64
HMGB1P21-201ENST00000502313 TNFRSF6BO95407 300 aa4.83□□□□□ -1.64
HMGB1P21-201ENST00000502313 PRKCAP17252 672 aa4.83□□□□□ -1.64
HMGB1P21-201ENST00000502313 RPL17P18621 184 aaKnown RBP4.83□□□□□ -1.64
HMGB1P21-201ENST00000502313 ATP6V1E1P36543 226 aa4.83□□□□□ -1.64
HMGB1P21-201ENST00000502313 TNNT3P45378 269 aaPredicted RBP4.83□□□□□ -1.64
HMGB1P21-201ENST00000502313 POLD2P49005 469 aa4.83□□□□□ -1.64
HMGB1P21-201ENST00000502313 SLC5A3P53794 718 aa4.83□□□□□ -1.64
HMGB1P21-201ENST00000502313 MANFP55145 182 aaKnown RBP4.83□□□□□ -1.64
HMGB1P21-201ENST00000502313 BCAR1P56945 870 aa4.83□□□□□ -1.64
HMGB1P21-201ENST00000502313 MRPS9P82933 396 aaKnown RBP4.83□□□□□ -1.64
HMGB1P21-201ENST00000502313 CDC16Q13042 620 aa4.83□□□□□ -1.64
HMGB1P21-201ENST00000502313 TUSC3Q13454 348 aa4.83□□□□□ -1.64
HMGB1P21-201ENST00000502313 ERV3-1Q14264 604 aa4.83□□□□□ -1.64
HMGB1P21-201ENST00000502313 BECN1Q14457 450 aa4.83□□□□□ -1.64
HMGB1P21-201ENST00000502313 CNGA2Q16280 664 aa4.83□□□□□ -1.64
HMGB1P21-201ENST00000502313 MUM1Q2TAK8 710 aa4.83□□□□□ -1.64
HMGB1P21-201ENST00000502313 ZMYM1Q5SVZ6 1142 aa4.83□□□□□ -1.64
HMGB1P21-201ENST00000502313 ANKRD45Q5TZF3 282 aa4.83□□□□□ -1.64
HMGB1P21-201ENST00000502313 MBNL2Q5VZF2 373 aaKnown RBP4.83□□□□□ -1.64
HMGB1P21-201ENST00000502313 CPZQ66K79 652 aa4.83□□□□□ -1.64
HMGB1P21-201ENST00000502313 SULT6B1Q6IMI4 303 aa4.83□□□□□ -1.64
HMGB1P21-201ENST00000502313 CYP4F22Q6NT55 531 aa4.83□□□□□ -1.64
HMGB1P21-201ENST00000502313 KDELC2Q7Z4H8 507 aa4.83□□□□□ -1.64
HMGB1P21-201ENST00000502313 GALNTL5Q7Z4T8 443 aa4.83□□□□□ -1.64
HMGB1P21-201ENST00000502313 DNAJB7Q7Z6W7 309 aaPredicted RBP4.83□□□□□ -1.64
HMGB1P21-201ENST00000502313 UBE2Q1Q7Z7E8 422 aa4.83□□□□□ -1.64
HMGB1P21-201ENST00000502313 IQCA1Q86XH1 822 aa4.83□□□□□ -1.64
HMGB1P21-201ENST00000502313 NME9Q86XW9 330 aa4.83□□□□□ -1.64
HMGB1P21-201ENST00000502313 C2CD5Q86YS7 1000 aa4.83□□□□□ -1.64
HMGB1P21-201ENST00000502313 TRIM48Q8IWZ4 208 aa4.83□□□□□ -1.64
HMGB1P21-201ENST00000502313 CEP57L1Q8IYX8 460 aa4.83□□□□□ -1.64
HMGB1P21-201ENST00000502313 Q8N1Y9 231 aa4.83□□□□□ -1.64
HMGB1P21-201ENST00000502313 MSANTD4Q8NCY6 345 aa4.83□□□□□ -1.64
HMGB1P21-201ENST00000502313 ZMIZ2Q8NF64 920 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms