RNA–Protein interactions for RNA: ENST00000498463.5

SNX13-212, Transcript of sorting nexin 13, humanhuman

TSL 3

Gene SNX13, Length 687 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-212ENST00000498463 A0A0U1RQG5 324 aaPredicted RBP9.53□□□□□ -0.88
SNX13-212ENST00000498463 KLHL18O94889 574 aa9.53□□□□□ -0.88
SNX13-212ENST00000498463 PRNPP04156 253 aa9.53□□□□□ -0.88
SNX13-212ENST00000498463 GNAI3P08754 354 aa9.53□□□□□ -0.88
SNX13-212ENST00000498463 TXNP10599 105 aaKnown RBP9.53□□□□□ -0.88
SNX13-212ENST00000498463 TUBP50607 506 aa9.53□□□□□ -0.88
SNX13-212ENST00000498463 GNAI1P63096 354 aa9.53□□□□□ -0.88
SNX13-212ENST00000498463 TMEM62Q0P6H9 643 aa9.53□□□□□ -0.88
SNX13-212ENST00000498463 ANKRD45Q5TZF3 282 aa9.53□□□□□ -0.88
SNX13-212ENST00000498463 CLEC14AQ86T13 490 aa9.53□□□□□ -0.88
SNX13-212ENST00000498463 MPP5Q8N3R9 675 aa9.53□□□□□ -0.88
SNX13-212ENST00000498463 CCDC150Q8NCX0 1101 aa9.53□□□□□ -0.88
SNX13-212ENST00000498463 IPCEF1Q8WWN9 437 aaPredicted RBP9.53□□□□□ -0.88
SNX13-212ENST00000498463 SERINC2Q96SA4 455 aa9.53□□□□□ -0.88
SNX13-212ENST00000498463 SYT3Q9BQG1 590 aa9.53□□□□□ -0.88
SNX13-212ENST00000498463 MLXIPQ9HAP2 919 aa9.53□□□□□ -0.88
SNX13-212ENST00000498463 SAYSD1Q9NPB0 183 aa9.53□□□□□ -0.88
SNX13-212ENST00000498463 SPATA6Q9NWH7 488 aaPredicted RBP9.53□□□□□ -0.88
SNX13-212ENST00000498463 FEM1BQ9UK73 627 aa9.53□□□□□ -0.88
SNX13-212ENST00000498463 PRSS29PA6NIE9 313 aa9.52□□□□□ -0.89
SNX13-212ENST00000498463 GRM6O15303 877 aa9.52□□□□□ -0.89
SNX13-212ENST00000498463 DAPK3O43293 454 aa9.52□□□□□ -0.89
SNX13-212ENST00000498463 IL2RBP14784 551 aa9.52□□□□□ -0.89
SNX13-212ENST00000498463 PTPN7P35236 360 aa9.52□□□□□ -0.89
SNX13-212ENST00000498463 ALDH1A3P47895 512 aa9.52□□□□□ -0.89
SNX13-212ENST00000498463 ZNF200P98182 395 aaPredicted RBP9.52□□□□□ -0.89
SNX13-212ENST00000498463 NUCB1Q02818 461 aa9.52□□□□□ -0.89
SNX13-212ENST00000498463 CACNB2Q08289 660 aaPredicted RBP9.52□□□□□ -0.89
SNX13-212ENST00000498463 FSTL1Q12841 308 aa9.52□□□□□ -0.89
SNX13-212ENST00000498463 EFR3AQ14156 821 aa9.52□□□□□ -0.89
SNX13-212ENST00000498463 KIF22Q14807 665 aa9.52□□□□□ -0.89
SNX13-212ENST00000498463 RTP5Q14D33 572 aa9.52□□□□□ -0.89
SNX13-212ENST00000498463 FAM26FQ5R3K3 315 aa9.52□□□□□ -0.89
SNX13-212ENST00000498463 DCAF12L1Q5VU92 463 aa9.52□□□□□ -0.89
SNX13-212ENST00000498463 MAELQ96JY0 434 aaKnown RBP9.52□□□□□ -0.89
SNX13-212ENST00000498463 SNX27Q96L92 541 aa9.52□□□□□ -0.89
SNX13-212ENST00000498463 ZSWIM3Q96MP5 696 aa9.52□□□□□ -0.89
SNX13-212ENST00000498463 PRPF18Q99633 342 aaKnown RBP9.52□□□□□ -0.89
SNX13-212ENST00000498463 RGS17Q9UGC6 210 aaPredicted RBP9.52□□□□□ -0.89
SNX13-212ENST00000498463 A0A087WWL8 130 aa9.51□□□□□ -0.89
SNX13-212ENST00000498463 TEX33O43247 280 aa9.51□□□□□ -0.89
SNX13-212ENST00000498463 FAM155BO75949 473 aa9.51□□□□□ -0.89
SNX13-212ENST00000498463 MED26O95402 600 aa9.51□□□□□ -0.89
SNX13-212ENST00000498463 A1BGP04217 495 aa9.51□□□□□ -0.89
SNX13-212ENST00000498463 ITGA2BP08514 1039 aa9.51□□□□□ -0.89
SNX13-212ENST00000498463 SBK3P0C264 359 aa9.51□□□□□ -0.89
SNX13-212ENST00000498463 CYP2C8P10632 490 aa9.51□□□□□ -0.89
SNX13-212ENST00000498463 ADD2P35612 726 aa9.51□□□□□ -0.89
SNX13-212ENST00000498463 COPAP53621 1224 aa9.51□□□□□ -0.89
SNX13-212ENST00000498463 TLE2Q04725 743 aa9.51□□□□□ -0.89
SNX13-212ENST00000498463 PABPC1LQ4VXU2 614 aaKnown RBP9.51□□□□□ -0.89
SNX13-212ENST00000498463 PRAMEF14Q5SWL7 426 aa9.51□□□□□ -0.89
SNX13-212ENST00000498463 AGAP9Q5VTM2 703 aa9.51□□□□□ -0.89
SNX13-212ENST00000498463 ARL6IP4Q66PJ3 421 aaKnown RBP9.51□□□□□ -0.89
SNX13-212ENST00000498463 TTLL5Q6EMB2 1281 aa9.51□□□□□ -0.89
SNX13-212ENST00000498463 GATAD2AQ86YP4 633 aa9.51□□□□□ -0.89
SNX13-212ENST00000498463 HERC6Q8IVU3 1022 aa9.51□□□□□ -0.89
SNX13-212ENST00000498463 DNAJC5GQ8N7S2 189 aa9.51□□□□□ -0.89
SNX13-212ENST00000498463 GPATCH11Q8N954 259 aa9.51□□□□□ -0.89
SNX13-212ENST00000498463 HTRA1Q92743 480 aa9.51□□□□□ -0.89
SNX13-212ENST00000498463 ING3Q9NXR8 418 aa9.51□□□□□ -0.89
SNX13-212ENST00000498463 HMX3A6NHT5 357 aa9.5□□□□□ -0.89
SNX13-212ENST00000498463 UNC5CO95185 931 aa9.5□□□□□ -0.89
SNX13-212ENST00000498463 ALOX15P16050 662 aaPredicted RBP9.5□□□□□ -0.89
SNX13-212ENST00000498463 RRM1P23921 792 aa9.5□□□□□ -0.89
SNX13-212ENST00000498463 IL1R2P27930 398 aa9.5□□□□□ -0.89
SNX13-212ENST00000498463 CST5P28325 142 aaPredicted RBP9.5□□□□□ -0.89
SNX13-212ENST00000498463 PAPOLAP51003 745 aaKnown RBP9.5□□□□□ -0.89
SNX13-212ENST00000498463 SP140Q13342 867 aa9.5□□□□□ -0.89
SNX13-212ENST00000498463 EIF4HQ15056 248 aaKnown RBP9.5□□□□□ -0.89
SNX13-212ENST00000498463 SURF1Q15526 300 aa9.5□□□□□ -0.89
SNX13-212ENST00000498463 ATP2B3Q16720 1220 aa9.5□□□□□ -0.89
SNX13-212ENST00000498463 CCDC30Q5VVM6 783 aa9.5□□□□□ -0.89
SNX13-212ENST00000498463 SPATA1Q5VX52 437 aa9.5□□□□□ -0.89
SNX13-212ENST00000498463 KLHL17Q6TDP4 642 aa9.5□□□□□ -0.89
SNX13-212ENST00000498463 DSTYKQ6XUX3 929 aa9.5□□□□□ -0.89
SNX13-212ENST00000498463 USP49Q70CQ1 688 aa9.5□□□□□ -0.89
SNX13-212ENST00000498463 ZNF572Q7Z3I7 529 aaPredicted RBP9.5□□□□□ -0.89
SNX13-212ENST00000498463 FLCNQ8NFG4 579 aa9.5□□□□□ -0.89
SNX13-212ENST00000498463 CFHR4Q92496 578 aa9.5□□□□□ -0.89
SNX13-212ENST00000498463 INTS4Q96HW7 963 aaKnown RBP9.5□□□□□ -0.89
SNX13-212ENST00000498463 CLIC6Q96NY7 704 aa9.5□□□□□ -0.89
SNX13-212ENST00000498463 HERC5Q9UII4 1024 aaKnown RBP9.5□□□□□ -0.89
SNX13-212ENST00000498463 MID2Q9UJV3 735 aa9.5□□□□□ -0.89
SNX13-212ENST00000498463 ADAMTS6Q9UKP5 1117 aa9.5□□□□□ -0.89
SNX13-212ENST00000498463 TMX2Q9Y320 296 aa9.5□□□□□ -0.89
SNX13-212ENST00000498463 VWA7Q9Y334 891 aa9.5□□□□□ -0.89
SNX13-212ENST00000498463 GFPT2O94808 682 aa9.49□□□□□ -0.89
SNX13-212ENST00000498463 DDX58O95786 925 aaKnown RBP9.49□□□□□ -0.89
SNX13-212ENST00000498463 GJB1P08034 283 aa9.49□□□□□ -0.89
SNX13-212ENST00000498463 RARBP10826 455 aa9.49□□□□□ -0.89
SNX13-212ENST00000498463 IDEP14735 1019 aa9.49□□□□□ -0.89
SNX13-212ENST00000498463 GYPEP15421 78 aa9.49□□□□□ -0.89
SNX13-212ENST00000498463 FBLN1P23142 703 aa9.49□□□□□ -0.89
SNX13-212ENST00000498463 SLC11A2P49281 568 aa9.49□□□□□ -0.89
SNX13-212ENST00000498463 PNLIPRP1P54315 467 aa9.49□□□□□ -0.89
SNX13-212ENST00000498463 NR1H2P55055 460 aa9.49□□□□□ -0.89
SNX13-212ENST00000498463 ITGA1P56199 1179 aa9.49□□□□□ -0.89
SNX13-212ENST00000498463 TRPC3Q13507 836 aa9.49□□□□□ -0.89
SNX13-212ENST00000498463 ICE2Q659A1 982 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms