RNA–Protein interactions for RNA: ENST00000497544.2

CTSD-206, Transcript of cathepsin D, humanhuman

TSL 2

Gene CTSD, Length 783 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-206ENST00000497544 SPRED2Q7Z698 418 aa21.6■■□□□ 1.05
CTSD-206ENST00000497544 TRIM59Q8IWR1 403 aa21.6■■□□□ 1.05
CTSD-206ENST00000497544 C1orf127Q8N9H9 656 aa21.6■■□□□ 1.05
CTSD-206ENST00000497544 ANKRD20A12PQ8NF67 263 aa21.6■■□□□ 1.05
CTSD-206ENST00000497544 FAM200AQ8TCP9 573 aa21.6■■□□□ 1.05
CTSD-206ENST00000497544 FAM84AQ96KN4 292 aa21.6■■□□□ 1.05
CTSD-206ENST00000497544 C17orf80Q9BSJ5 609 aa21.6■■□□□ 1.05
CTSD-206ENST00000497544 PLVAPQ9BX97 442 aa21.6■■□□□ 1.05
CTSD-206ENST00000497544 MTUS1Q9ULD2 1270 aa21.6■■□□□ 1.05
CTSD-206ENST00000497544 AGAP1Q9UPQ3 857 aa21.6■■□□□ 1.05
CTSD-206ENST00000497544 GOLGA6L19H0YKK7 550 aa21.59■■□□□ 1.05
CTSD-206ENST00000497544 LINC00271P0C7V0 271 aa21.59■■□□□ 1.05
CTSD-206ENST00000497544 KRT17Q04695 432 aa21.59■■□□□ 1.05
CTSD-206ENST00000497544 PPP3CAQ08209 521 aa21.59■■□□□ 1.05
CTSD-206ENST00000497544 TRPC3Q13507 836 aa21.59■■□□□ 1.05
CTSD-206ENST00000497544 LEXMQ3ZCV2 418 aa21.59■■□□□ 1.05
CTSD-206ENST00000497544 EPC2Q52LR7 807 aa21.59■■□□□ 1.05
CTSD-206ENST00000497544 TCP11X2Q5H9J9 407 aa21.59■■□□□ 1.05
CTSD-206ENST00000497544 C9orf57Q5W0N0 161 aa21.59■■□□□ 1.05
CTSD-206ENST00000497544 LUZP1Q86V48 1076 aa21.59■■□□□ 1.05
CTSD-206ENST00000497544 SLC39A11Q8N1S5 342 aa21.59■■□□□ 1.05
CTSD-206ENST00000497544 TMEM130Q8N3G9 435 aa21.59■■□□□ 1.05
CTSD-206ENST00000497544 SLC35C1Q96A29 364 aa21.59■■□□□ 1.05
CTSD-206ENST00000497544 TMEM169Q96HH4 297 aa21.59■■□□□ 1.05
CTSD-206ENST00000497544 TMEM8AQ9HCN3 771 aa21.59■■□□□ 1.05
CTSD-206ENST00000497544 NUB1Q9Y5A7 615 aa21.59■■□□□ 1.05
CTSD-206ENST00000497544 KIAA1671Q9BY89 1806 aa21.58■■□□□ 1.05
CTSD-206ENST00000497544 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP21.58■■□□□ 1.05
CTSD-206ENST00000497544 ANO9A1A5B4 782 aa21.58■■□□□ 1.05
CTSD-206ENST00000497544 PIRO00625 290 aa21.58■■□□□ 1.05
CTSD-206ENST00000497544 TPM2P07951 284 aa21.58■■□□□ 1.05
CTSD-206ENST00000497544 PRKCSHP14314 528 aaPredicted RBP21.58■■□□□ 1.05
CTSD-206ENST00000497544 POLR2BP30876 1174 aaKnown RBP21.58■■□□□ 1.05
CTSD-206ENST00000497544 KCNH2Q12809 1159 aa21.58■■□□□ 1.05
CTSD-206ENST00000497544 ZACNQ401N2 412 aa21.58■■□□□ 1.05
CTSD-206ENST00000497544 CDKAL1Q5VV42 579 aa21.58■■□□□ 1.05
CTSD-206ENST00000497544 KRT39Q6A163 491 aa21.58■■□□□ 1.05
CTSD-206ENST00000497544 KLHL23Q8NBE8 558 aa21.58■■□□□ 1.05
CTSD-206ENST00000497544 FBXO22Q8NEZ5 403 aa21.58■■□□□ 1.05
CTSD-206ENST00000497544 IGSF21Q96ID5 467 aa21.58■■□□□ 1.05
CTSD-206ENST00000497544 TUBGCP2Q9BSJ2 902 aa21.58■■□□□ 1.05
CTSD-206ENST00000497544 SCN1AP35498 2009 aa21.57■■□□□ 1.04
CTSD-206ENST00000497544 N4BP1O75113 896 aaKnown RBP21.57■■□□□ 1.04
CTSD-206ENST00000497544 FGF18O76093 207 aa21.57■■□□□ 1.04
CTSD-206ENST00000497544 CST3P01034 146 aaPredicted RBP21.57■■□□□ 1.04
CTSD-206ENST00000497544 MAN2A1Q16706 1144 aa21.57■■□□□ 1.04
CTSD-206ENST00000497544 TDRD10Q5VZ19 366 aaKnown RBP21.57■■□□□ 1.04
CTSD-206ENST00000497544 HASPINQ8TF76 798 aa21.57■■□□□ 1.04
CTSD-206ENST00000497544 ZNF560Q96MR9 790 aa21.57■■□□□ 1.04
CTSD-206ENST00000497544 PUF60Q9UHX1 559 aaKnown RBP21.57■■□□□ 1.04
CTSD-206ENST00000497544 ADAM28Q9UKQ2 775 aa21.57■■□□□ 1.04
CTSD-206ENST00000497544 C5orf67F2Z3F1 127 aa21.56■■□□□ 1.04
CTSD-206ENST00000497544 TMEM189-UBE2V1I3L0A0 370 aa21.56■■□□□ 1.04
CTSD-206ENST00000497544 KIF4AO95239 1232 aa21.56■■□□□ 1.04
CTSD-206ENST00000497544 AFPP02771 609 aaKnown RBP21.56■■□□□ 1.04
CTSD-206ENST00000497544 PAX3P23760 479 aa21.56■■□□□ 1.04
CTSD-206ENST00000497544 PNPLA4P41247 253 aa21.56■■□□□ 1.04
CTSD-206ENST00000497544 FMO5P49326 533 aa21.56■■□□□ 1.04
CTSD-206ENST00000497544 MXI1P50539 228 aa21.56■■□□□ 1.04
CTSD-206ENST00000497544 CETN1Q12798 172 aa21.56■■□□□ 1.04
CTSD-206ENST00000497544 MYO1EQ12965 1108 aa21.56■■□□□ 1.04
CTSD-206ENST00000497544 C15orf39Q6ZRI6 1047 aa21.56■■□□□ 1.04
CTSD-206ENST00000497544 C11orf84Q9BUA3 381 aaPredicted RBP21.56■■□□□ 1.04
CTSD-206ENST00000497544 SIX4Q9UIU6 781 aa21.56■■□□□ 1.04
CTSD-206ENST00000497544 F8W810 466 aa21.55■■□□□ 1.04
CTSD-206ENST00000497544 PES1O00541 588 aaKnown RBP21.55■■□□□ 1.04
CTSD-206ENST00000497544 PPEF2O14830 753 aa21.55■■□□□ 1.04
CTSD-206ENST00000497544 TRAPPC3O43617 180 aa21.55■■□□□ 1.04
CTSD-206ENST00000497544 CLSTN1O94985 981 aa21.55■■□□□ 1.04
CTSD-206ENST00000497544 ZNF18P17022 549 aa21.55■■□□□ 1.04
CTSD-206ENST00000497544 KCNA5P22460 613 aa21.55■■□□□ 1.04
CTSD-206ENST00000497544 PIK3CAP42336 1068 aa21.55■■□□□ 1.04
CTSD-206ENST00000497544 TAF6P49848 677 aa21.55■■□□□ 1.04
CTSD-206ENST00000497544 PLCB3Q01970 1234 aa21.55■■□□□ 1.04
CTSD-206ENST00000497544 ELAVL2Q12926 359 aaKnown RBP21.55■■□□□ 1.04
CTSD-206ENST00000497544 NCOA4Q13772 614 aa21.55■■□□□ 1.04
CTSD-206ENST00000497544 SV2CQ496J9 727 aa21.55■■□□□ 1.04
CTSD-206ENST00000497544 PTCRAQ6ISU1 281 aaPredicted RBP21.55■■□□□ 1.04
CTSD-206ENST00000497544 DSTYKQ6XUX3 929 aa21.55■■□□□ 1.04
CTSD-206ENST00000497544 TMEM173Q86WV6 379 aaPredicted RBP21.55■■□□□ 1.04
CTSD-206ENST00000497544 LRRC52Q8N7C0 313 aa21.55■■□□□ 1.04
CTSD-206ENST00000497544 HPDLQ96IR7 371 aa21.55■■□□□ 1.04
CTSD-206ENST00000497544 MARCH5Q9NX47 278 aa21.55■■□□□ 1.04
CTSD-206ENST00000497544 DCHS1Q96JQ0 3298 aa21.54■■□□□ 1.04
CTSD-206ENST00000497544 GFRA3O60609 400 aa21.54■■□□□ 1.04
CTSD-206ENST00000497544 HLA-DRAP01903 254 aa21.54■■□□□ 1.04
CTSD-206ENST00000497544 ITGB1P05556 798 aa21.54■■□□□ 1.04
CTSD-206ENST00000497544 IGFBP6P24592 240 aaPredicted RBP21.54■■□□□ 1.04
CTSD-206ENST00000497544 ATICP31939 592 aa21.54■■□□□ 1.04
CTSD-206ENST00000497544 BRCC3P46736 316 aa21.54■■□□□ 1.04
CTSD-206ENST00000497544 PTPN5P54829 565 aa21.54■■□□□ 1.04
CTSD-206ENST00000497544 LILRA4P59901 499 aa21.54■■□□□ 1.04
CTSD-206ENST00000497544 MYL6P60660 151 aa21.54■■□□□ 1.04
CTSD-206ENST00000497544 GPM6BQ13491 265 aa21.54■■□□□ 1.04
CTSD-206ENST00000497544 KRT31Q15323 416 aa21.54■■□□□ 1.04
CTSD-206ENST00000497544 CBWD6Q4V339 395 aa21.54■■□□□ 1.04
CTSD-206ENST00000497544 VWA3BQ502W6 1294 aa21.54■■□□□ 1.04
CTSD-206ENST00000497544 CBWD3Q5JTY5 395 aa21.54■■□□□ 1.04
CTSD-206ENST00000497544 CBWD5Q5RIA9 395 aa21.54■■□□□ 1.04
CTSD-206ENST00000497544 FUT10Q6P4F1 479 aa21.54■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms