RNA–Protein interactions for RNA: ENST00000497539.5

SNRNP200-208, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 1 (best)

Gene SNRNP200, Length 2,666 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-208ENST00000497539 DEUP1Q05D60 604 aa12.33□□□□□ -0.44
SNRNP200-208ENST00000497539 LAMTOR4Q0VGL1 99 aa12.33□□□□□ -0.44
SNRNP200-208ENST00000497539 SURF1Q15526 300 aa12.33□□□□□ -0.44
SNRNP200-208ENST00000497539 QPCTQ16769 361 aa12.33□□□□□ -0.44
SNRNP200-208ENST00000497539 FAM187BQ17R55 369 aa12.33□□□□□ -0.44
SNRNP200-208ENST00000497539 C16orf87Q6PH81 154 aa12.33□□□□□ -0.44
SNRNP200-208ENST00000497539 NOP9Q86U38 636 aaKnown RBP12.33□□□□□ -0.44
SNRNP200-208ENST00000497539 PPTC7Q8NI37 304 aa12.33□□□□□ -0.44
SNRNP200-208ENST00000497539 SLC20A1Q8WUM9 679 aa12.33□□□□□ -0.44
SNRNP200-208ENST00000497539 MSTO1Q9BUK6 570 aa12.33□□□□□ -0.44
SNRNP200-208ENST00000497539 LRRC4CQ9HCJ2 640 aa12.33□□□□□ -0.44
SNRNP200-208ENST00000497539 ANK1P16157 1881 aa12.33□□□□□ -0.44
SNRNP200-208ENST00000497539 BHMG1C9JSJ3 638 aaPredicted RBP12.33□□□□□ -0.44
SNRNP200-208ENST00000497539 LRRN2O75325 713 aa12.33□□□□□ -0.44
SNRNP200-208ENST00000497539 GH1P01241 217 aa12.33□□□□□ -0.44
SNRNP200-208ENST00000497539 HSD17B3P37058 310 aa12.33□□□□□ -0.44
SNRNP200-208ENST00000497539 FMO1Q01740 532 aa12.33□□□□□ -0.44
SNRNP200-208ENST00000497539 TFDP1Q14186 410 aa12.33□□□□□ -0.44
SNRNP200-208ENST00000497539 GRB14Q14449 540 aa12.33□□□□□ -0.44
SNRNP200-208ENST00000497539 CLUL1Q15846 466 aa12.33□□□□□ -0.44
SNRNP200-208ENST00000497539 DBN1Q16643 649 aa12.33□□□□□ -0.44
SNRNP200-208ENST00000497539 ODF2Q5BJF6 829 aa12.33□□□□□ -0.44
SNRNP200-208ENST00000497539 TRMT1LQ7Z2T5 733 aaKnown RBP12.33□□□□□ -0.44
SNRNP200-208ENST00000497539 SDCCAG8Q86SQ7 713 aaPredicted RBP12.33□□□□□ -0.44
SNRNP200-208ENST00000497539 ZBTB8OSQ8IWT0 167 aa12.33□□□□□ -0.44
SNRNP200-208ENST00000497539 CCDC13Q8IYE1 715 aa12.33□□□□□ -0.44
SNRNP200-208ENST00000497539 CACTIN-AS1Q8N1I8 211 aa12.33□□□□□ -0.44
SNRNP200-208ENST00000497539 SLC35G2Q8TBE7 412 aa12.33□□□□□ -0.44
SNRNP200-208ENST00000497539 TAF4BQ92750 862 aa12.33□□□□□ -0.44
SNRNP200-208ENST00000497539 KAT5Q92993 513 aa12.33□□□□□ -0.44
SNRNP200-208ENST00000497539 POP1Q99575 1024 aaKnown RBP12.33□□□□□ -0.44
SNRNP200-208ENST00000497539 ACO2Q99798 780 aaKnown RBP12.33□□□□□ -0.44
SNRNP200-208ENST00000497539 NEUROG2Q9H2A3 272 aa12.33□□□□□ -0.44
SNRNP200-208ENST00000497539 FZD8Q9H461 694 aa12.33□□□□□ -0.44
SNRNP200-208ENST00000497539 PTPRHQ9HD43 1115 aa12.33□□□□□ -0.44
SNRNP200-208ENST00000497539 RBAKQ9NYW8 714 aaPredicted RBP12.33□□□□□ -0.44
SNRNP200-208ENST00000497539 CCL15-CCL14A0A0B4J2E2 113 aa12.32□□□□□ -0.44
SNRNP200-208ENST00000497539 DCDC2CA8MYV0 355 aa12.32□□□□□ -0.44
SNRNP200-208ENST00000497539 CEP104O60308 925 aa12.32□□□□□ -0.44
SNRNP200-208ENST00000497539 SGPL1O95470 568 aa12.32□□□□□ -0.44
SNRNP200-208ENST00000497539 VNN1O95497 513 aa12.32□□□□□ -0.44
SNRNP200-208ENST00000497539 CYP1A2P05177 515 aa12.32□□□□□ -0.44
SNRNP200-208ENST00000497539 CYP2C8P10632 490 aa12.32□□□□□ -0.44
SNRNP200-208ENST00000497539 CYP11B1P15538 503 aa12.32□□□□□ -0.44
SNRNP200-208ENST00000497539 CCL15Q16663 113 aa12.32□□□□□ -0.44
SNRNP200-208ENST00000497539 TDRD10Q5VZ19 366 aaKnown RBP12.32□□□□□ -0.44
SNRNP200-208ENST00000497539 WDR49Q8IV35 697 aa12.32□□□□□ -0.44
SNRNP200-208ENST00000497539 IQCF2Q8IXL9 164 aa12.32□□□□□ -0.44
SNRNP200-208ENST00000497539 UBR7Q8N806 425 aa12.32□□□□□ -0.44
SNRNP200-208ENST00000497539 MAB21L3Q8N8X9 362 aa12.32□□□□□ -0.44
SNRNP200-208ENST00000497539 EIF1ADQ8N9N8 165 aaKnown RBP12.32□□□□□ -0.44
SNRNP200-208ENST00000497539 PCDHB18PQ96TA0 734 aa12.32□□□□□ -0.44
SNRNP200-208ENST00000497539 TARS2Q9BW92 718 aaKnown RBP12.32□□□□□ -0.44
SNRNP200-208ENST00000497539 GBA2Q9HCG7 927 aaPredicted RBP12.32□□□□□ -0.44
SNRNP200-208ENST00000497539 C1orf112Q9NSG2 853 aa12.32□□□□□ -0.44
SNRNP200-208ENST00000497539 ERAP1Q9NZ08 941 aa12.32□□□□□ -0.44
SNRNP200-208ENST00000497539 TRPM7Q96QT4 1865 aa12.32□□□□□ -0.44
SNRNP200-208ENST00000497539 C22orf31O95567 290 aa12.32□□□□□ -0.44
SNRNP200-208ENST00000497539 ADORA2AP29274 412 aa12.32□□□□□ -0.44
SNRNP200-208ENST00000497539 BPIFB4P59827 614 aa12.32□□□□□ -0.44
SNRNP200-208ENST00000497539 UAP1Q16222 522 aaPredicted RBP12.32□□□□□ -0.44
SNRNP200-208ENST00000497539 SPRYD7Q5W111 196 aa12.32□□□□□ -0.44
SNRNP200-208ENST00000497539 PPP1R2P3Q6NXS1 205 aa12.32□□□□□ -0.44
SNRNP200-208ENST00000497539 PALB2Q86YC2 1186 aa12.32□□□□□ -0.44
SNRNP200-208ENST00000497539 PPM1KQ8N3J5 372 aa12.32□□□□□ -0.44
SNRNP200-208ENST00000497539 USP38Q8NB14 1042 aa12.32□□□□□ -0.44
SNRNP200-208ENST00000497539 GLG1Q92896 1179 aa12.32□□□□□ -0.44
SNRNP200-208ENST00000497539 CYFIP2Q96F07 1278 aa12.32□□□□□ -0.44
SNRNP200-208ENST00000497539 FNBP1Q96RU3 617 aa12.32□□□□□ -0.44
SNRNP200-208ENST00000497539 PARK7Q99497 189 aaKnown RBP12.32□□□□□ -0.44
SNRNP200-208ENST00000497539 KLC4Q9NSK0 619 aa12.32□□□□□ -0.44
SNRNP200-208ENST00000497539 TAS2R14Q9NYV8 317 aa12.32□□□□□ -0.44
SNRNP200-208ENST00000497539 FAM107AO95990 144 aa12.31□□□□□ -0.44
SNRNP200-208ENST00000497539 HLA-DRAP01903 254 aa12.31□□□□□ -0.44
SNRNP200-208ENST00000497539 FAM200BP0CF97 657 aa12.31□□□□□ -0.44
SNRNP200-208ENST00000497539 ACO1P21399 889 aaKnown RBP12.31□□□□□ -0.44
SNRNP200-208ENST00000497539 TBXAS1P24557 533 aaPredicted RBP12.31□□□□□ -0.44
SNRNP200-208ENST00000497539 PDE6CP51160 858 aa12.31□□□□□ -0.44
SNRNP200-208ENST00000497539 WNT7BP56706 349 aa12.31□□□□□ -0.44
SNRNP200-208ENST00000497539 GPC5P78333 572 aa12.31□□□□□ -0.44
SNRNP200-208ENST00000497539 DRP2Q13474 957 aa12.31□□□□□ -0.44
SNRNP200-208ENST00000497539 GPR162Q16538 588 aa12.31□□□□□ -0.44
SNRNP200-208ENST00000497539 FAM110CQ1W6H9 321 aa12.31□□□□□ -0.44
SNRNP200-208ENST00000497539 MICALCLQ6ZW33 695 aa12.31□□□□□ -0.44
SNRNP200-208ENST00000497539 EEPD1Q7L9B9 569 aa12.31□□□□□ -0.44
SNRNP200-208ENST00000497539 TAX1BP1Q86VP1 789 aa12.31□□□□□ -0.44
SNRNP200-208ENST00000497539 ARHGEF26Q96DR7 871 aa12.31□□□□□ -0.44
SNRNP200-208ENST00000497539 RPS6KC1Q96S38 1066 aa12.31□□□□□ -0.44
SNRNP200-208ENST00000497539 DDX47Q9H0S4 455 aaKnown RBP12.31□□□□□ -0.44
SNRNP200-208ENST00000497539 TMBIM4Q9HC24 238 aa12.31□□□□□ -0.44
SNRNP200-208ENST00000497539 PTPRJQ12913 1337 aa12.31□□□□□ -0.44
SNRNP200-208ENST00000497539 GOLGA6L10A6NI86 522 aa12.31□□□□□ -0.44
SNRNP200-208ENST00000497539 ACKR2O00590 384 aa12.31□□□□□ -0.44
SNRNP200-208ENST00000497539 OGTO15294 1046 aa12.31□□□□□ -0.44
SNRNP200-208ENST00000497539 MAGEB2O15479 319 aa12.31□□□□□ -0.44
SNRNP200-208ENST00000497539 DDX3YO15523 660 aaKnown RBP12.31□□□□□ -0.44
SNRNP200-208ENST00000497539 CYP26A1O43174 497 aa12.31□□□□□ -0.44
SNRNP200-208ENST00000497539 PRKCBP05771 671 aa12.31□□□□□ -0.44
SNRNP200-208ENST00000497539 MYZAPP0CAP1 466 aa12.31□□□□□ -0.44
SNRNP200-208ENST00000497539 CTNNA1P35221 906 aaKnown RBP12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms