RNA–Protein interactions for RNA: ENST00000497203.1

SMC4-225, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 490 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-225ENST00000497203 PJA2O43164 708 aa4.99□□□□□ -1.61
SMC4-225ENST00000497203 FZD7O75084 574 aa4.99□□□□□ -1.61
SMC4-225ENST00000497203 SCAF4O95104 1147 aaKnown RBP4.99□□□□□ -1.61
SMC4-225ENST00000497203 SNRPA1P09661 255 aaKnown RBP4.99□□□□□ -1.61
SMC4-225ENST00000497203 RAP2AP10114 183 aa4.99□□□□□ -1.61
SMC4-225ENST00000497203 MTHFD1P11586 935 aaKnown RBP4.99□□□□□ -1.61
SMC4-225ENST00000497203 NR4A1P22736 598 aa4.99□□□□□ -1.61
SMC4-225ENST00000497203 PCSK1P29120 753 aa4.99□□□□□ -1.61
SMC4-225ENST00000497203 ACVRL1P37023 503 aa4.99□□□□□ -1.61
SMC4-225ENST00000497203 HTR3AP46098 478 aa4.99□□□□□ -1.61
SMC4-225ENST00000497203 ALDH1A3P47895 512 aa4.99□□□□□ -1.61
SMC4-225ENST00000497203 CLRN1P58418 232 aa4.99□□□□□ -1.61
SMC4-225ENST00000497203 NHLH2Q02577 135 aa4.99□□□□□ -1.61
SMC4-225ENST00000497203 FLYWCH1Q4VC44 716 aa4.99□□□□□ -1.61
SMC4-225ENST00000497203 OTUD7BQ6GQQ9 843 aa4.99□□□□□ -1.61
SMC4-225ENST00000497203 EFCAB12Q6NXP0 572 aa4.99□□□□□ -1.61
SMC4-225ENST00000497203 PLXDC1Q8IUK5 500 aa4.99□□□□□ -1.61
SMC4-225ENST00000497203 SH2D3CQ8N5H7 860 aa4.99□□□□□ -1.61
SMC4-225ENST00000497203 PLBD2Q8NHP8 589 aa4.99□□□□□ -1.61
SMC4-225ENST00000497203 GJA10Q969M2 543 aa4.99□□□□□ -1.61
SMC4-225ENST00000497203 APIPQ96GX9 242 aa4.99□□□□□ -1.61
SMC4-225ENST00000497203 MYD88Q99836 296 aa4.99□□□□□ -1.61
SMC4-225ENST00000497203 C11orf54Q9H0W9 315 aaPredicted RBP4.99□□□□□ -1.61
SMC4-225ENST00000497203 ZNF768Q9H5H4 540 aaKnown RBP4.99□□□□□ -1.61
SMC4-225ENST00000497203 GPRC5BQ9NZH0 403 aa4.99□□□□□ -1.61
SMC4-225ENST00000497203 POGKQ9P215 609 aa4.99□□□□□ -1.61
SMC4-225ENST00000497203 EIF2B4Q9UI10 523 aaKnown RBP4.99□□□□□ -1.61
SMC4-225ENST00000497203 CLCA2Q9UQC9 943 aa4.99□□□□□ -1.61
SMC4-225ENST00000497203 RIPOR2Q9Y4F9 1068 aa4.99□□□□□ -1.61
SMC4-225ENST00000497203 PCDHGB6Q9Y5F9 930 aa4.99□□□□□ -1.61
SMC4-225ENST00000497203 ACTL7AQ9Y615 435 aa4.99□□□□□ -1.61
SMC4-225ENST00000497203 NT5C1B-RDH14C9J2C7 533 aa4.98□□□□□ -1.61
SMC4-225ENST00000497203 TRIM24O15164 1050 aa4.98□□□□□ -1.61
SMC4-225ENST00000497203 RPS6KA4O75676 772 aa4.98□□□□□ -1.61
SMC4-225ENST00000497203 LDHAP00338 332 aaKnown RBP4.98□□□□□ -1.61
SMC4-225ENST00000497203 CD1AP06126 327 aa4.98□□□□□ -1.61
SMC4-225ENST00000497203 MYF5P13349 255 aa4.98□□□□□ -1.61
SMC4-225ENST00000497203 SLC5A1P13866 664 aa4.98□□□□□ -1.61
SMC4-225ENST00000497203 ATP5JP18859 108 aa4.98□□□□□ -1.61
SMC4-225ENST00000497203 ZFP36P26651 326 aaKnown RBP4.98□□□□□ -1.61
SMC4-225ENST00000497203 PRDX5P30044 214 aa4.98□□□□□ -1.61
SMC4-225ENST00000497203 RAP2BP61225 183 aa4.98□□□□□ -1.61
SMC4-225ENST00000497203 FAM189BP81408 668 aa4.98□□□□□ -1.61
SMC4-225ENST00000497203 PABPC1LQ4VXU2 614 aaKnown RBP4.98□□□□□ -1.61
SMC4-225ENST00000497203 DACT2Q5SW24 774 aa4.98□□□□□ -1.61
SMC4-225ENST00000497203 SWSAP1Q6NVH7 229 aa4.98□□□□□ -1.61
SMC4-225ENST00000497203 APOA5Q6Q788 366 aa4.98□□□□□ -1.61
SMC4-225ENST00000497203 SEM1Q6ZVN7 128 aa4.98□□□□□ -1.61
SMC4-225ENST00000497203 SMC5Q8IY18 1101 aa4.98□□□□□ -1.61
SMC4-225ENST00000497203 FAM186BQ8IYM0 893 aa4.98□□□□□ -1.61
SMC4-225ENST00000497203 ZNF276Q8N554 614 aa4.98□□□□□ -1.61
SMC4-225ENST00000497203 ACRBPQ8NEB7 543 aa4.98□□□□□ -1.61
SMC4-225ENST00000497203 NLGN4YQ8NFZ3 816 aaPredicted RBP4.98□□□□□ -1.61
SMC4-225ENST00000497203 ZFP28Q8NHY6 868 aa4.98□□□□□ -1.61
SMC4-225ENST00000497203 ZNF483Q8TF39 744 aaPredicted RBP4.98□□□□□ -1.61
SMC4-225ENST00000497203 SLC25A43Q8WUT9 341 aaPredicted RBP4.98□□□□□ -1.61
SMC4-225ENST00000497203 SUCLG2Q96I99 432 aa4.98□□□□□ -1.61
SMC4-225ENST00000497203 NEU1Q99519 415 aa4.98□□□□□ -1.61
SMC4-225ENST00000497203 MYOCQ99972 504 aa4.98□□□□□ -1.61
SMC4-225ENST00000497203 MRI1Q9BV20 369 aa4.98□□□□□ -1.61
SMC4-225ENST00000497203 NAA15Q9BXJ9 866 aaKnown RBP4.98□□□□□ -1.61
SMC4-225ENST00000497203 TEX101Q9BY14 249 aa4.98□□□□□ -1.61
SMC4-225ENST00000497203 CHMP4AQ9BY43 222 aa4.98□□□□□ -1.61
SMC4-225ENST00000497203 C22orf23Q9BZE7 217 aa4.98□□□□□ -1.61
SMC4-225ENST00000497203 MMRN2Q9H8L6 949 aa4.98□□□□□ -1.61
SMC4-225ENST00000497203 ZMAT3Q9HA38 289 aaKnown RBP4.98□□□□□ -1.61
SMC4-225ENST00000497203 NLRC4Q9NPP4 1024 aa4.98□□□□□ -1.61
SMC4-225ENST00000497203 PIH1D1Q9NWS0 290 aaKnown RBP4.98□□□□□ -1.61
SMC4-225ENST00000497203 STAP2Q9UGK3 403 aa4.98□□□□□ -1.61
SMC4-225ENST00000497203 REXO2Q9Y3B8 237 aaKnown RBP4.98□□□□□ -1.61
SMC4-225ENST00000497203 CHST2Q9Y4C5 530 aa4.98□□□□□ -1.61
SMC4-225ENST00000497203 ISM1B1AKI9 464 aa4.97□□□□□ -1.61
SMC4-225ENST00000497203 F2RL2O00254 374 aa4.97□□□□□ -1.61
SMC4-225ENST00000497203 PEX11BO96011 259 aa4.97□□□□□ -1.61
SMC4-225ENST00000497203 MYL3P08590 195 aa4.97□□□□□ -1.61
SMC4-225ENST00000497203 GNAI3P08754 354 aa4.97□□□□□ -1.61
SMC4-225ENST00000497203 ALAS1P13196 640 aa4.97□□□□□ -1.61
SMC4-225ENST00000497203 GDF5P43026 501 aa4.97□□□□□ -1.61
SMC4-225ENST00000497203 TM4SF4P48230 202 aa4.97□□□□□ -1.61
SMC4-225ENST00000497203 PIK3CGP48736 1102 aa4.97□□□□□ -1.61
SMC4-225ENST00000497203 RNASE9P60153 205 aaKnown RBP4.97□□□□□ -1.61
SMC4-225ENST00000497203 GNAI1P63096 354 aa4.97□□□□□ -1.61
SMC4-225ENST00000497203 KLF10Q13118 480 aa4.97□□□□□ -1.61
SMC4-225ENST00000497203 LONRF1Q17RB8 773 aa4.97□□□□□ -1.61
SMC4-225ENST00000497203 KHDC1LQ5JSQ8 128 aa4.97□□□□□ -1.61
SMC4-225ENST00000497203 ATXN7L2Q5T6C5 722 aaPredicted RBP4.97□□□□□ -1.61
SMC4-225ENST00000497203 METRNLQ641Q3 311 aa4.97□□□□□ -1.61
SMC4-225ENST00000497203 TOGARAM2Q6ZUX3 1019 aa4.97□□□□□ -1.61
SMC4-225ENST00000497203 MORC1Q86VD1 984 aa4.97□□□□□ -1.61
SMC4-225ENST00000497203 ZFPM1Q8IX07 1006 aa4.97□□□□□ -1.61
SMC4-225ENST00000497203 AOPEPQ8N6M6 819 aa4.97□□□□□ -1.61
SMC4-225ENST00000497203 IL31RAQ8NI17 732 aa4.97□□□□□ -1.61
SMC4-225ENST00000497203 ANKS1AQ92625 1134 aa4.97□□□□□ -1.61
SMC4-225ENST00000497203 PHKBQ93100 1093 aa4.97□□□□□ -1.61
SMC4-225ENST00000497203 PACSIN1Q9BY11 444 aa4.97□□□□□ -1.61
SMC4-225ENST00000497203 MRPL46Q9H2W6 279 aaKnown RBP4.97□□□□□ -1.61
SMC4-225ENST00000497203 NRDE2Q9H7Z3 1164 aa4.97□□□□□ -1.61
SMC4-225ENST00000497203 ATP6V0A4Q9HBG4 840 aa4.97□□□□□ -1.61
SMC4-225ENST00000497203 KIAA1586Q9HCI6 787 aa4.97□□□□□ -1.61
SMC4-225ENST00000497203 TRPM5Q9NZQ8 1165 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms