RNA–Protein interactions for RNA: ENST00000495553.1

ACTN4-207, Transcript of actinin alpha 4, humanhuman

TSL 5

Gene ACTN4, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-207ENST00000495553 LMBRD2Q68DH5 695 aaPredicted RBP10.2□□□□□ -0.78
ACTN4-207ENST00000495553 TMC6Q7Z403 805 aa10.2□□□□□ -0.78
ACTN4-207ENST00000495553 ZNF280BQ86YH2 543 aa10.2□□□□□ -0.78
ACTN4-207ENST00000495553 VSTM4Q8IW00 320 aa10.2□□□□□ -0.78
ACTN4-207ENST00000495553 MICALL1Q8N3F8 863 aa10.2□□□□□ -0.78
ACTN4-207ENST00000495553 TTC39CQ8N584 583 aa10.2□□□□□ -0.78
ACTN4-207ENST00000495553 LRRC52Q8N7C0 313 aa10.2□□□□□ -0.78
ACTN4-207ENST00000495553 EHBP1Q8NDI1 1231 aa10.2□□□□□ -0.78
ACTN4-207ENST00000495553 TMEM169Q96HH4 297 aa10.2□□□□□ -0.78
ACTN4-207ENST00000495553 FAXDC2Q96IV6 333 aa10.2□□□□□ -0.78
ACTN4-207ENST00000495553 TMEM175Q9BSA9 504 aa10.2□□□□□ -0.78
ACTN4-207ENST00000495553 CRACR2AQ9BSW2 395 aa10.2□□□□□ -0.78
ACTN4-207ENST00000495553 LSM14BQ9BX40 385 aaKnown RBP10.2□□□□□ -0.78
ACTN4-207ENST00000495553 NRDE2Q9H7Z3 1164 aa10.2□□□□□ -0.78
ACTN4-207ENST00000495553 ALG13Q9NP73 1137 aaKnown RBP10.2□□□□□ -0.78
ACTN4-207ENST00000495553 PLCB1Q9NQ66 1216 aa10.2□□□□□ -0.78
ACTN4-207ENST00000495553 FAM207AQ9NSI2 230 aaPredicted RBP10.2□□□□□ -0.78
ACTN4-207ENST00000495553 MIOSQ9NXC5 875 aa10.2□□□□□ -0.78
ACTN4-207ENST00000495553 LMCD1Q9NZU5 365 aa10.2□□□□□ -0.78
ACTN4-207ENST00000495553 PLAGL2Q9UPG8 496 aa10.2□□□□□ -0.78
ACTN4-207ENST00000495553 STXBP5LQ9Y2K9 1186 aa10.2□□□□□ -0.78
ACTN4-207ENST00000495553 FAN1Q9Y2M0 1017 aa10.2□□□□□ -0.78
ACTN4-207ENST00000495553 COQ4Q9Y3A0 265 aa10.2□□□□□ -0.78
ACTN4-207ENST00000495553 COL4A6Q14031 1691 aa10.19□□□□□ -0.78
ACTN4-207ENST00000495553 NT5C1B-RDH14C9J2C7 533 aa10.19□□□□□ -0.78
ACTN4-207ENST00000495553 GRM6O15303 877 aa10.19□□□□□ -0.78
ACTN4-207ENST00000495553 TEX33O43247 280 aa10.19□□□□□ -0.78
ACTN4-207ENST00000495553 DDHD2O94830 711 aa10.19□□□□□ -0.78
ACTN4-207ENST00000495553 CSPG5O95196 566 aa10.19□□□□□ -0.78
ACTN4-207ENST00000495553 ITGB3P05106 788 aa10.19□□□□□ -0.78
ACTN4-207ENST00000495553 ITGB1P05556 798 aa10.19□□□□□ -0.78
ACTN4-207ENST00000495553 CCDC172P0C7W6 258 aa10.19□□□□□ -0.78
ACTN4-207ENST00000495553 PON1P27169 355 aa10.19□□□□□ -0.78
ACTN4-207ENST00000495553 SLC11A1P49279 550 aa10.19□□□□□ -0.78
ACTN4-207ENST00000495553 UBE3AQ05086 875 aa10.19□□□□□ -0.78
ACTN4-207ENST00000495553 TUSC3Q13454 348 aa10.19□□□□□ -0.78
ACTN4-207ENST00000495553 BMS1Q14692 1282 aaKnown RBP10.19□□□□□ -0.78
ACTN4-207ENST00000495553 SV2CQ496J9 727 aa10.19□□□□□ -0.78
ACTN4-207ENST00000495553 GLRA4Q5JXX5 417 aa10.19□□□□□ -0.78
ACTN4-207ENST00000495553 C1orf220Q5T0J3 134 aa10.19□□□□□ -0.78
ACTN4-207ENST00000495553 TRIM65Q6PJ69 517 aa10.19□□□□□ -0.78
ACTN4-207ENST00000495553 C15orf39Q6ZRI6 1047 aa10.19□□□□□ -0.78
ACTN4-207ENST00000495553 CNGA4Q8IV77 575 aa10.19□□□□□ -0.78
ACTN4-207ENST00000495553 EFCAB13Q8IY85 973 aa10.19□□□□□ -0.78
ACTN4-207ENST00000495553 OR5B17Q8NGF7 314 aa10.19□□□□□ -0.78
ACTN4-207ENST00000495553 SPPL3Q8TCT6 385 aa10.19□□□□□ -0.78
ACTN4-207ENST00000495553 PLEKHO2Q8TD55 490 aa10.19□□□□□ -0.78
ACTN4-207ENST00000495553 MICAL1Q8TDZ2 1067 aa10.19□□□□□ -0.78
ACTN4-207ENST00000495553 MRPL38Q96DV4 380 aaKnown RBP10.19□□□□□ -0.78
ACTN4-207ENST00000495553 PPP1R10Q96QC0 940 aaKnown RBP10.19□□□□□ -0.78
ACTN4-207ENST00000495553 SPAG5Q96R06 1193 aa10.19□□□□□ -0.78
ACTN4-207ENST00000495553 EDEM3Q9BZQ6 932 aa10.19□□□□□ -0.78
ACTN4-207ENST00000495553 LMAN2LQ9H0V9 348 aa10.19□□□□□ -0.78
ACTN4-207ENST00000495553 ZNHIT6Q9NWK9 470 aaKnown RBP10.19□□□□□ -0.78
ACTN4-207ENST00000495553 APEX2Q9UBZ4 518 aa10.19□□□□□ -0.78
ACTN4-207ENST00000495553 DNAJB4Q9UDY4 337 aa10.19□□□□□ -0.78
ACTN4-207ENST00000495553 AGAP1Q9UPQ3 857 aa10.19□□□□□ -0.78
ACTN4-207ENST00000495553 PRG3Q9Y2Y8 225 aaPredicted RBP10.19□□□□□ -0.78
ACTN4-207ENST00000495553 LUC7L2Q9Y383 392 aaKnown RBP10.19□□□□□ -0.78
ACTN4-207ENST00000495553 MTCH2Q9Y6C9 303 aa10.19□□□□□ -0.78
ACTN4-207ENST00000495553 RALGAPA2Q2PPJ7 1873 aa10.19□□□□□ -0.78
ACTN4-207ENST00000495553 A0A1W2PQJ5 194 aa10.18□□□□□ -0.78
ACTN4-207ENST00000495553 NRP1O14786 923 aa10.18□□□□□ -0.78
ACTN4-207ENST00000495553 TRAPPC3O43617 180 aa10.18□□□□□ -0.78
ACTN4-207ENST00000495553 LPXNO60711 386 aa10.18□□□□□ -0.78
ACTN4-207ENST00000495553 POU3F3P20264 500 aaPredicted RBP10.18□□□□□ -0.78
ACTN4-207ENST00000495553 LRPAP1P30533 357 aa10.18□□□□□ -0.78
ACTN4-207ENST00000495553 POLR2BP30876 1174 aaKnown RBP10.18□□□□□ -0.78
ACTN4-207ENST00000495553 TAF6P49848 677 aa10.18□□□□□ -0.78
ACTN4-207ENST00000495553 NOP14P78316 857 aaKnown RBP10.18□□□□□ -0.78
ACTN4-207ENST00000495553 PLCB3Q01970 1234 aa10.18□□□□□ -0.78
ACTN4-207ENST00000495553 DSC1Q08554 894 aa10.18□□□□□ -0.78
ACTN4-207ENST00000495553 CCDC85BQ15834 202 aaPredicted RBP10.18□□□□□ -0.78
ACTN4-207ENST00000495553 ZBTB6Q15916 424 aa10.18□□□□□ -0.78
ACTN4-207ENST00000495553 TIGD5Q53EQ6 642 aa10.18□□□□□ -0.78
ACTN4-207ENST00000495553 FIGNQ5HY92 759 aa10.18□□□□□ -0.78
ACTN4-207ENST00000495553 ZNF667Q5HYK9 610 aa10.18□□□□□ -0.78
ACTN4-207ENST00000495553 C9orf57Q5W0N0 161 aa10.18□□□□□ -0.78
ACTN4-207ENST00000495553 SMYD5Q6GMV2 418 aa10.18□□□□□ -0.78
ACTN4-207ENST00000495553 COLGALT2Q8IYK4 626 aa10.18□□□□□ -0.78
ACTN4-207ENST00000495553 SLC39A11Q8N1S5 342 aa10.18□□□□□ -0.78
ACTN4-207ENST00000495553 PPM1KQ8N3J5 372 aa10.18□□□□□ -0.78
ACTN4-207ENST00000495553 C1orf127Q8N9H9 656 aa10.18□□□□□ -0.78
ACTN4-207ENST00000495553 SPC24Q8NBT2 197 aa10.18□□□□□ -0.78
ACTN4-207ENST00000495553 GSTCDQ8NEC7 633 aa10.18□□□□□ -0.78
ACTN4-207ENST00000495553 MAFAQ8NHW3 353 aaPredicted RBP10.18□□□□□ -0.78
ACTN4-207ENST00000495553 TAS1R2Q8TE23 839 aa10.18□□□□□ -0.78
ACTN4-207ENST00000495553 POF1BQ8WVV4 589 aa10.18□□□□□ -0.78
ACTN4-207ENST00000495553 PPM1EQ8WY54 764 aa10.18□□□□□ -0.78
ACTN4-207ENST00000495553 ZNF516Q92618 1163 aa10.18□□□□□ -0.78
ACTN4-207ENST00000495553 JAKMIP2Q96AA8 810 aa10.18□□□□□ -0.78
ACTN4-207ENST00000495553 C18orf25Q96B23 403 aaPredicted RBP10.18□□□□□ -0.78
ACTN4-207ENST00000495553 IGSF21Q96ID5 467 aa10.18□□□□□ -0.78
ACTN4-207ENST00000495553 HPDLQ96IR7 371 aa10.18□□□□□ -0.78
ACTN4-207ENST00000495553 ZMAT2Q96NC0 199 aaKnown RBP10.18□□□□□ -0.78
ACTN4-207ENST00000495553 COLEC11Q9BWP8 271 aa10.18□□□□□ -0.78
ACTN4-207ENST00000495553 FAM124BQ9H5Z6 455 aaPredicted RBP10.18□□□□□ -0.78
ACTN4-207ENST00000495553 CEP72Q9P209 647 aa10.18□□□□□ -0.78
ACTN4-207ENST00000495553 STK39Q9UEW8 545 aa10.18□□□□□ -0.78
ACTN4-207ENST00000495553 TUBGCP4Q9UGJ1 667 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms