RNA–Protein interactions for RNA: ENST00000495497.1

HDAC4-212, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-212ENST00000495497 C4BPAP04003 597 aaKnown RBP20.95■□□□□ 0.94
HDAC4-212ENST00000495497 KRT13P13646 458 aa20.95■□□□□ 0.94
HDAC4-212ENST00000495497 KLRC2P26717 231 aa20.95■□□□□ 0.94
HDAC4-212ENST00000495497 CLDN10P78369 228 aa20.95■□□□□ 0.94
HDAC4-212ENST00000495497 BFSP1Q12934 665 aa20.95■□□□□ 0.94
HDAC4-212ENST00000495497 ADAM15Q13444 863 aa20.95■□□□□ 0.94
HDAC4-212ENST00000495497 VARS2Q5ST30 1063 aaKnown RBP20.95■□□□□ 0.94
HDAC4-212ENST00000495497 TDRD10Q5VZ19 366 aaKnown RBP20.95■□□□□ 0.94
HDAC4-212ENST00000495497 RSPO2Q6UXX9 243 aaPredicted RBP20.95■□□□□ 0.94
HDAC4-212ENST00000495497 INTS8Q75QN2 995 aaKnown RBP20.95■□□□□ 0.94
HDAC4-212ENST00000495497 ELMO3Q96BJ8 720 aa20.95■□□□□ 0.94
HDAC4-212ENST00000495497 MKNK1Q9BUB5 465 aa20.95■□□□□ 0.94
HDAC4-212ENST00000495497 EMILIN2Q9BXX0 1053 aa20.95■□□□□ 0.94
HDAC4-212ENST00000495497 MMRN2Q9H8L6 949 aa20.95■□□□□ 0.94
HDAC4-212ENST00000495497 RWDD2AQ9UIY3 292 aa20.95■□□□□ 0.94
HDAC4-212ENST00000495497 SYN3O14994 580 aa20.94■□□□□ 0.94
HDAC4-212ENST00000495497 SLC16A3O15427 465 aaKnown RBP20.94■□□□□ 0.94
HDAC4-212ENST00000495497 ADAM12O43184 909 aa20.94■□□□□ 0.94
HDAC4-212ENST00000495497 GLP2RO95838 553 aa20.94■□□□□ 0.94
HDAC4-212ENST00000495497 DLX2Q07687 328 aaPredicted RBP20.94■□□□□ 0.94
HDAC4-212ENST00000495497 PPP3CAQ08209 521 aa20.94■□□□□ 0.94
HDAC4-212ENST00000495497 BIRC3Q13489 604 aa20.94■□□□□ 0.94
HDAC4-212ENST00000495497 EFHBQ8N7U6 833 aa20.94■□□□□ 0.94
HDAC4-212ENST00000495497 ZNF560Q96MR9 790 aa20.94■□□□□ 0.94
HDAC4-212ENST00000495497 CDCA3Q99618 268 aaPredicted RBP20.94■□□□□ 0.94
HDAC4-212ENST00000495497 CLSTN3Q9BQT9 956 aa20.94■□□□□ 0.94
HDAC4-212ENST00000495497 SRRTQ9BXP5 876 aaKnown RBP20.94■□□□□ 0.94
HDAC4-212ENST00000495497 KPNA7A9QM74 516 aa20.93■□□□□ 0.94
HDAC4-212ENST00000495497 CYB561D2O14569 222 aa20.93■□□□□ 0.94
HDAC4-212ENST00000495497 PHACTR2O75167 634 aa20.93■□□□□ 0.94
HDAC4-212ENST00000495497 EPCAMP16422 314 aa20.93■□□□□ 0.94
HDAC4-212ENST00000495497 LTBRP36941 435 aa20.93■□□□□ 0.94
HDAC4-212ENST00000495497 GCLMP48507 274 aa20.93■□□□□ 0.94
HDAC4-212ENST00000495497 SV2CQ496J9 727 aa20.93■□□□□ 0.94
HDAC4-212ENST00000495497 FILIP1Q7Z7B0 1213 aa20.93■□□□□ 0.94
HDAC4-212ENST00000495497 PALB2Q86YC2 1186 aa20.93■□□□□ 0.94
HDAC4-212ENST00000495497 LRRC52Q8N7C0 313 aa20.93■□□□□ 0.94
HDAC4-212ENST00000495497 PABPC5Q96DU9 382 aaKnown RBP20.93■□□□□ 0.94
HDAC4-212ENST00000495497 HPDLQ96IR7 371 aa20.93■□□□□ 0.94
HDAC4-212ENST00000495497 CEP63Q96MT8 703 aa20.93■□□□□ 0.94
HDAC4-212ENST00000495497 FNIP2Q9P278 1114 aa20.93■□□□□ 0.94
HDAC4-212ENST00000495497 BARX2Q9UMQ3 279 aaPredicted RBP20.93■□□□□ 0.94
HDAC4-212ENST00000495497 R3HCC1Q9Y3T6 440 aaKnown RBP20.93■□□□□ 0.94
HDAC4-212ENST00000495497 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP20.92■□□□□ 0.94
HDAC4-212ENST00000495497 IKBKBO14920 756 aa20.92■□□□□ 0.94
HDAC4-212ENST00000495497 VNN1O95497 513 aa20.92■□□□□ 0.94
HDAC4-212ENST00000495497 PNPLA4P41247 253 aa20.92■□□□□ 0.94
HDAC4-212ENST00000495497 AP3M2P53677 418 aa20.92■□□□□ 0.94
HDAC4-212ENST00000495497 MYL6P60660 151 aa20.92■□□□□ 0.94
HDAC4-212ENST00000495497 TRPC3Q13507 836 aa20.92■□□□□ 0.94
HDAC4-212ENST00000495497 KCNC3Q14003 757 aa20.92■□□□□ 0.94
HDAC4-212ENST00000495497 MRPL58Q14197 206 aaKnown RBP20.92■□□□□ 0.94
HDAC4-212ENST00000495497 COL19A1Q14993 1142 aa20.92■□□□□ 0.94
HDAC4-212ENST00000495497 CTC1Q2NKJ3 1217 aa20.92■□□□□ 0.94
HDAC4-212ENST00000495497 KLHL40Q2TBA0 621 aa20.92■□□□□ 0.94
HDAC4-212ENST00000495497 CCDC40Q4G0X9 1142 aa20.92■□□□□ 0.94
HDAC4-212ENST00000495497 FOXR2Q6PJQ5 311 aa20.92■□□□□ 0.94
HDAC4-212ENST00000495497 SASS6Q6UVJ0 657 aa20.92■□□□□ 0.94
HDAC4-212ENST00000495497 ANKS3Q6ZW76 656 aa20.92■□□□□ 0.94
HDAC4-212ENST00000495497 SV2AQ7L0J3 742 aa20.92■□□□□ 0.94
HDAC4-212ENST00000495497 GPR65Q8IYL9 337 aa20.92■□□□□ 0.94
HDAC4-212ENST00000495497 APPL2Q8NEU8 664 aa20.92■□□□□ 0.94
HDAC4-212ENST00000495497 SLC22A17Q8WUG5 538 aa20.92■□□□□ 0.94
HDAC4-212ENST00000495497 HLA-CQ95604 372 aa20.92■□□□□ 0.94
HDAC4-212ENST00000495497 UBE2ZQ9H832 354 aaPredicted RBP20.92■□□□□ 0.94
HDAC4-212ENST00000495497 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP20.92■□□□□ 0.94
HDAC4-212ENST00000495497 MTRRQ9UBK8 725 aa20.92■□□□□ 0.94
HDAC4-212ENST00000495497 HCFC2Q9Y5Z7 792 aa20.92■□□□□ 0.94
HDAC4-212ENST00000495497 CDY1Q9Y6F8 540 aa20.92■□□□□ 0.94
HDAC4-212ENST00000495497 VWA8A3KMH1 1905 aa20.92■□□□□ 0.94
HDAC4-212ENST00000495497 SCN1AP35498 2009 aa20.92■□□□□ 0.94
HDAC4-212ENST00000495497 TBX10O75333 385 aa20.91■□□□□ 0.94
HDAC4-212ENST00000495497 ADH1AP07327 375 aa20.91■□□□□ 0.94
HDAC4-212ENST00000495497 SPATA31D3P0C874 917 aa20.91■□□□□ 0.94
HDAC4-212ENST00000495497 ODC1P11926 461 aa20.91■□□□□ 0.94
HDAC4-212ENST00000495497 OR1D2P34982 312 aa20.91■□□□□ 0.94
HDAC4-212ENST00000495497 NDUFV1P49821 464 aa20.91■□□□□ 0.94
HDAC4-212ENST00000495497 CLCN4P51793 760 aa20.91■□□□□ 0.94
HDAC4-212ENST00000495497 MCCD1P59942 119 aaPredicted RBP20.91■□□□□ 0.94
HDAC4-212ENST00000495497 TFF2Q03403 129 aa20.91■□□□□ 0.94
HDAC4-212ENST00000495497 ZACNQ401N2 412 aa20.91■□□□□ 0.94
HDAC4-212ENST00000495497 DCAF17Q5H9S7 520 aaPredicted RBP20.91■□□□□ 0.94
HDAC4-212ENST00000495497 TCERG1LQ5VWI1 586 aa20.91■□□□□ 0.94
HDAC4-212ENST00000495497 WSCD1Q658N2 575 aa20.91■□□□□ 0.94
HDAC4-212ENST00000495497 PDXDC1Q6P996 788 aa20.91■□□□□ 0.94
HDAC4-212ENST00000495497 C15orf39Q6ZRI6 1047 aa20.91■□□□□ 0.94
HDAC4-212ENST00000495497 SPATA31D4Q6ZUB0 917 aa20.91■□□□□ 0.94
HDAC4-212ENST00000495497 USP37Q86T82 979 aa20.91■□□□□ 0.94
HDAC4-212ENST00000495497 CLEC1BQ9P126 229 aa20.91■□□□□ 0.94
HDAC4-212ENST00000495497 ARMCX3Q9UH62 379 aaPredicted RBP20.91■□□□□ 0.94
HDAC4-212ENST00000495497 DACH1Q9UI36 760 aa20.91■□□□□ 0.94
HDAC4-212ENST00000495497 SNX9Q9Y5X1 595 aa20.91■□□□□ 0.94
HDAC4-212ENST00000495497 PRUNE2Q8WUY3 3088 aa20.91■□□□□ 0.94
HDAC4-212ENST00000495497 H3BQ06 376 aaPredicted RBP20.9■□□□□ 0.94
HDAC4-212ENST00000495497 NCK2O43639 380 aa20.9■□□□□ 0.94
HDAC4-212ENST00000495497 TBC1D4O60343 1298 aa20.9■□□□□ 0.94
HDAC4-212ENST00000495497 TYMPP19971 482 aa20.9■□□□□ 0.94
HDAC4-212ENST00000495497 PTMSP20962 102 aa20.9■□□□□ 0.94
HDAC4-212ENST00000495497 KCNA5P22460 613 aa20.9■□□□□ 0.94
HDAC4-212ENST00000495497 PAX3P23760 479 aa20.9■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms