RNA–Protein interactions for RNA: ENST00000494795.1

SAMM50-206, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 2

Gene SAMM50, Length 3,248 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-206ENST00000494795 TSHZ1Q6ZSZ6 1077 aa11.09□□□□□ -0.63
SAMM50-206ENST00000494795 DPH6Q7L8W6 267 aa11.09□□□□□ -0.63
SAMM50-206ENST00000494795 ABRAQ8N0Z2 381 aa11.09□□□□□ -0.63
SAMM50-206ENST00000494795 UBR7Q8N806 425 aa11.09□□□□□ -0.63
SAMM50-206ENST00000494795 UHMK1Q8TAS1 419 aaKnown RBP11.09□□□□□ -0.63
SAMM50-206ENST00000494795 RAB6CQ9H0N0 254 aa11.09□□□□□ -0.63
SAMM50-206ENST00000494795 TUT1Q9H6E5 874 aaKnown RBP11.09□□□□□ -0.63
SAMM50-206ENST00000494795 GBA2Q9HCG7 927 aaPredicted RBP11.09□□□□□ -0.63
SAMM50-206ENST00000494795 NMRK2Q9NPI5 230 aa11.09□□□□□ -0.63
SAMM50-206ENST00000494795 ANK1P16157 1881 aa11.08□□□□□ -0.64
SAMM50-206ENST00000494795 BHMG1C9JSJ3 638 aaPredicted RBP11.08□□□□□ -0.64
SAMM50-206ENST00000494795 H0YCG3 227 aa11.08□□□□□ -0.64
SAMM50-206ENST00000494795 IGF2BP3O00425 579 aaKnown RBP eCLIP11.08□□□□□ -0.64
SAMM50-206ENST00000494795 PPEF2O14830 753 aa11.08□□□□□ -0.64
SAMM50-206ENST00000494795 HBP1O60381 514 aa11.08□□□□□ -0.64
SAMM50-206ENST00000494795 HADHBP55084 474 aaKnown RBP11.08□□□□□ -0.64
SAMM50-206ENST00000494795 MAMLD1Q13495 774 aa11.08□□□□□ -0.64
SAMM50-206ENST00000494795 WDR72Q3MJ13 1102 aa11.08□□□□□ -0.64
SAMM50-206ENST00000494795 ZBTB8OSQ8IWT0 167 aa11.08□□□□□ -0.64
SAMM50-206ENST00000494795 IQCKQ8N0W5 287 aa11.08□□□□□ -0.64
SAMM50-206ENST00000494795 CAVIN3Q969G5 261 aa11.08□□□□□ -0.64
SAMM50-206ENST00000494795 FAM167AQ96KS9 214 aa11.08□□□□□ -0.64
SAMM50-206ENST00000494795 VIPAS39Q9H9C1 493 aa11.08□□□□□ -0.64
SAMM50-206ENST00000494795 TRIP11Q15643 1979 aa11.08□□□□□ -0.64
SAMM50-206ENST00000494795 ATP8B3O60423 1300 aa11.08□□□□□ -0.64
SAMM50-206ENST00000494795 DCDC2CA8MYV0 355 aa11.08□□□□□ -0.64
SAMM50-206ENST00000494795 LDHAP00338 332 aaKnown RBP11.08□□□□□ -0.64
SAMM50-206ENST00000494795 ITGB3P05106 788 aa11.08□□□□□ -0.64
SAMM50-206ENST00000494795 TUBBP07437 444 aa11.08□□□□□ -0.64
SAMM50-206ENST00000494795 STAG3L1P0CL83 205 aa11.08□□□□□ -0.64
SAMM50-206ENST00000494795 IGFBP6P24592 240 aaPredicted RBP11.08□□□□□ -0.64
SAMM50-206ENST00000494795 TMOD1P28289 359 aa11.08□□□□□ -0.64
SAMM50-206ENST00000494795 CTNNA1P35221 906 aaKnown RBP11.08□□□□□ -0.64
SAMM50-206ENST00000494795 HSD17B3P37058 310 aa11.08□□□□□ -0.64
SAMM50-206ENST00000494795 PTGIRP43119 386 aa11.08□□□□□ -0.64
SAMM50-206ENST00000494795 NSFP46459 744 aaKnown RBP11.08□□□□□ -0.64
SAMM50-206ENST00000494795 CENPCQ03188 943 aa11.08□□□□□ -0.64
SAMM50-206ENST00000494795 HSP90B2PQ58FF3 399 aa11.08□□□□□ -0.64
SAMM50-206ENST00000494795 USP37Q86T82 979 aa11.08□□□□□ -0.64
SAMM50-206ENST00000494795 FAM71BQ8TC56 605 aa11.08□□□□□ -0.64
SAMM50-206ENST00000494795 PDZD7Q9H5P4 517 aa11.08□□□□□ -0.64
SAMM50-206ENST00000494795 ADAM22Q9P0K1 906 aa11.08□□□□□ -0.64
SAMM50-206ENST00000494795 F8VP50 259 aa11.07□□□□□ -0.64
SAMM50-206ENST00000494795 DYNC1LI2O43237 492 aaPredicted RBP11.07□□□□□ -0.64
SAMM50-206ENST00000494795 ATP1A2P50993 1020 aa11.07□□□□□ -0.64
SAMM50-206ENST00000494795 EFNA5P52803 228 aa11.07□□□□□ -0.64
SAMM50-206ENST00000494795 DR1Q01658 176 aa11.07□□□□□ -0.64
SAMM50-206ENST00000494795 SLC10A6Q3KNW5 377 aa11.07□□□□□ -0.64
SAMM50-206ENST00000494795 SPRYD7Q5W111 196 aa11.07□□□□□ -0.64
SAMM50-206ENST00000494795 EMBQ6PCB8 327 aa11.07□□□□□ -0.64
SAMM50-206ENST00000494795 JAMLQ86YT9 394 aa11.07□□□□□ -0.64
SAMM50-206ENST00000494795 WDR49Q8IV35 697 aa11.07□□□□□ -0.64
SAMM50-206ENST00000494795 CXorf38Q8TB03 319 aa11.07□□□□□ -0.64
SAMM50-206ENST00000494795 NLRP7Q8WX94 980 aa11.07□□□□□ -0.64
SAMM50-206ENST00000494795 MAGOHBQ96A72 148 aaKnown RBP11.07□□□□□ -0.64
SAMM50-206ENST00000494795 ZIC5Q96T25 663 aa11.07□□□□□ -0.64
SAMM50-206ENST00000494795 DNAJC17Q9NVM6 304 aaKnown RBP11.07□□□□□ -0.64
SAMM50-206ENST00000494795 PCDHA3Q9Y5H8 950 aa11.07□□□□□ -0.64
SAMM50-206ENST00000494795 ASB14A6NK59 587 aa11.07□□□□□ -0.64
SAMM50-206ENST00000494795 ZC3H11AO75152 810 aaKnown RBP eCLIP11.07□□□□□ -0.64
SAMM50-206ENST00000494795 MTA2O94776 668 aa11.07□□□□□ -0.64
SAMM50-206ENST00000494795 TMEM191BP0C7N4 346 aa11.07□□□□□ -0.64
SAMM50-206ENST00000494795 CETPP11597 493 aa11.07□□□□□ -0.64
SAMM50-206ENST00000494795 MCM3P25205 808 aa11.07□□□□□ -0.64
SAMM50-206ENST00000494795 TNFRSF8P28908 595 aa11.07□□□□□ -0.64
SAMM50-206ENST00000494795 RPL21P46778 160 aaKnown RBP11.07□□□□□ -0.64
SAMM50-206ENST00000494795 ZNF132P52740 706 aa11.07□□□□□ -0.64
SAMM50-206ENST00000494795 NUBP1P53384 320 aa11.07□□□□□ -0.64
SAMM50-206ENST00000494795 PLTPP55058 493 aa11.07□□□□□ -0.64
SAMM50-206ENST00000494795 BEX3Q00994 111 aa11.07□□□□□ -0.64
SAMM50-206ENST00000494795 PAK2Q13177 524 aa11.07□□□□□ -0.64
SAMM50-206ENST00000494795 GLRA4Q5JXX5 417 aa11.07□□□□□ -0.64
SAMM50-206ENST00000494795 DENND1BQ6P3S1 775 aa11.07□□□□□ -0.64
SAMM50-206ENST00000494795 MTHFD1LQ6UB35 978 aa11.07□□□□□ -0.64
SAMM50-206ENST00000494795 LINC01465Q8N7H1 131 aa11.07□□□□□ -0.64
SAMM50-206ENST00000494795 FBXO25Q8TCJ0 367 aa11.07□□□□□ -0.64
SAMM50-206ENST00000494795 PLAAQ9Y263 795 aa11.07□□□□□ -0.64
SAMM50-206ENST00000494795 IVNS1ABPQ9Y6Y0 642 aa11.07□□□□□ -0.64
SAMM50-206ENST00000494795 GH1P01241 217 aa11.07□□□□□ -0.64
SAMM50-206ENST00000494795 KRT10P13645 584 aa11.07□□□□□ -0.64
SAMM50-206ENST00000494795 SSR1P43307 286 aaKnown RBP11.07□□□□□ -0.64
SAMM50-206ENST00000494795 DUOXA2Q1HG44 320 aa11.07□□□□□ -0.64
SAMM50-206ENST00000494795 ZNF699Q32M78 642 aa11.07□□□□□ -0.64
SAMM50-206ENST00000494795 ZDHHC24Q6UX98 284 aa11.07□□□□□ -0.64
SAMM50-206ENST00000494795 RUFY4Q6ZNE9 571 aa11.07□□□□□ -0.64
SAMM50-206ENST00000494795 ILDR2Q71H61 639 aa11.07□□□□□ -0.64
SAMM50-206ENST00000494795 SLC13A5Q86YT5 568 aaPredicted RBP11.07□□□□□ -0.64
SAMM50-206ENST00000494795 TCP11Q8WWU5 503 aa11.07□□□□□ -0.64
SAMM50-206ENST00000494795 CALR3Q96L12 384 aaKnown RBP11.07□□□□□ -0.64
SAMM50-206ENST00000494795 EIF2AQ9BY44 585 aaKnown RBP11.07□□□□□ -0.64
SAMM50-206ENST00000494795 CENPHQ9H3R5 247 aa11.07□□□□□ -0.64
SAMM50-206ENST00000494795 C10orf88Q9H8K7 445 aa11.07□□□□□ -0.64
SAMM50-206ENST00000494795 IQCA1LA6NCM1 817 aa11.06□□□□□ -0.64
SAMM50-206ENST00000494795 TP73O15350 636 aa11.06□□□□□ -0.64
SAMM50-206ENST00000494795 SHBGP04278 402 aa11.06□□□□□ -0.64
SAMM50-206ENST00000494795 MMP3P08254 477 aa11.06□□□□□ -0.64
SAMM50-206ENST00000494795 VPS41P49754 854 aa11.06□□□□□ -0.64
SAMM50-206ENST00000494795 DHX9Q08211 1270 aaKnown RBP11.06□□□□□ -0.64
SAMM50-206ENST00000494795 OLFML2BQ68BL8 750 aa11.06□□□□□ -0.64
SAMM50-206ENST00000494795 CCDC137Q6PK04 289 aaKnown RBP11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms