RNA–Protein interactions for RNA: ENST00000493952.2

SATB1-217, Transcript of SATB homeobox 1, humanhuman

TSL 3 BASIC

Gene SATB1, Length 626 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SATB1-217ENST00000493952 ELMSAN1Q6PJG2 1045 aa17.47■□□□□ 0.39
SATB1-217ENST00000493952 DSTYKQ6XUX3 929 aa17.47■□□□□ 0.39
SATB1-217ENST00000493952 C12orf56Q8IXR9 622 aa17.47■□□□□ 0.39
SATB1-217ENST00000493952 XXYLT1Q8NBI6 393 aa17.47■□□□□ 0.39
SATB1-217ENST00000493952 APPL2Q8NEU8 664 aa17.47■□□□□ 0.39
SATB1-217ENST00000493952 CMASQ8NFW8 434 aaPredicted RBP17.47■□□□□ 0.39
SATB1-217ENST00000493952 KHSRPQ92945 711 aaKnown RBP eCLIP17.47■□□□□ 0.39
SATB1-217ENST00000493952 CCDC47Q96A33 483 aaKnown RBP17.47■□□□□ 0.39
SATB1-217ENST00000493952 NECTIN4Q96NY8 510 aa17.47■□□□□ 0.39
SATB1-217ENST00000493952 KCTD10Q9H3F6 313 aa17.47■□□□□ 0.39
SATB1-217ENST00000493952 KIAA1586Q9HCI6 787 aa17.47■□□□□ 0.39
SATB1-217ENST00000493952 CGNQ9P2M7 1197 aaKnown RBP17.47■□□□□ 0.39
SATB1-217ENST00000493952 TIMM13Q9Y5L4 95 aaPredicted RBP17.47■□□□□ 0.39
SATB1-217ENST00000493952 CCDC195A0A1B0GUA6 201 aa17.46■□□□□ 0.39
SATB1-217ENST00000493952 H7C4K7 107 aa17.46■□□□□ 0.39
SATB1-217ENST00000493952 ITGB3P05106 788 aa17.46■□□□□ 0.39
SATB1-217ENST00000493952 KCNB1Q14721 858 aa17.46■□□□□ 0.39
SATB1-217ENST00000493952 CTXN3Q4LDR2 81 aa17.46■□□□□ 0.39
SATB1-217ENST00000493952 ATAT1Q5SQI0 421 aa17.46■□□□□ 0.39
SATB1-217ENST00000493952 LMBRD2Q68DH5 695 aaPredicted RBP17.46■□□□□ 0.39
SATB1-217ENST00000493952 ZNF280DQ6N043 979 aa17.46■□□□□ 0.39
SATB1-217ENST00000493952 C15orf39Q6ZRI6 1047 aa17.46■□□□□ 0.39
SATB1-217ENST00000493952 C1orf127Q8N9H9 656 aa17.46■□□□□ 0.39
SATB1-217ENST00000493952 RDH13Q8NBN7 331 aa17.46■□□□□ 0.39
SATB1-217ENST00000493952 CACTINQ8WUQ7 758 aaKnown RBP17.46■□□□□ 0.39
SATB1-217ENST00000493952 CCDC34Q96HJ3 373 aa17.46■□□□□ 0.39
SATB1-217ENST00000493952 RPGRIP1Q96KN7 1286 aa17.46■□□□□ 0.39
SATB1-217ENST00000493952 SENP8Q96LD8 212 aa17.46■□□□□ 0.39
SATB1-217ENST00000493952 MTMR12Q9C0I1 747 aa17.46■□□□□ 0.39
SATB1-217ENST00000493952 FBXL5Q9UKA1 691 aa17.46■□□□□ 0.39
SATB1-217ENST00000493952 WDR27A2RRH5 827 aa17.45■□□□□ 0.38
SATB1-217ENST00000493952 LOC730098B7Z3J9 87 aa17.45■□□□□ 0.38
SATB1-217ENST00000493952 ZMYND10O75800 440 aa17.45■□□□□ 0.38
SATB1-217ENST00000493952 PAPLNO95428 1278 aa17.45■□□□□ 0.38
SATB1-217ENST00000493952 SP100P23497 879 aaPredicted RBP17.45■□□□□ 0.38
SATB1-217ENST00000493952 POLR2BP30876 1174 aaKnown RBP17.45■□□□□ 0.38
SATB1-217ENST00000493952 TAF6P49848 677 aa17.45■□□□□ 0.38
SATB1-217ENST00000493952 YWHAHQ04917 246 aaPredicted RBP17.45■□□□□ 0.38
SATB1-217ENST00000493952 SCARA3Q6AZY7 606 aa17.45■□□□□ 0.38
SATB1-217ENST00000493952 CXorf38Q8TB03 319 aa17.45■□□□□ 0.38
SATB1-217ENST00000493952 GOLGA5Q8TBA6 731 aa17.45■□□□□ 0.38
SATB1-217ENST00000493952 ZNF707Q96C28 371 aaPredicted RBP17.45■□□□□ 0.38
SATB1-217ENST00000493952 TIGD1Q96MW7 591 aa17.45■□□□□ 0.38
SATB1-217ENST00000493952 INTS13Q9NVM9 706 aa17.45■□□□□ 0.38
SATB1-217ENST00000493952 ZDHHC7Q9NXF8 308 aa17.45■□□□□ 0.38
SATB1-217ENST00000493952 PDXKO00764 312 aa17.44■□□□□ 0.38
SATB1-217ENST00000493952 OAZ2O95190 189 aa17.44■□□□□ 0.38
SATB1-217ENST00000493952 C8AP07357 584 aa17.44■□□□□ 0.38
SATB1-217ENST00000493952 TMEM191BP0C7N4 346 aa17.44■□□□□ 0.38
SATB1-217ENST00000493952 ODC1P11926 461 aa17.44■□□□□ 0.38
SATB1-217ENST00000493952 TYMPP19971 482 aa17.44■□□□□ 0.38
SATB1-217ENST00000493952 PAX3P23760 479 aa17.44■□□□□ 0.38
SATB1-217ENST00000493952 ARPP19P56211 112 aa17.44■□□□□ 0.38
SATB1-217ENST00000493952 CYP24A1Q07973 514 aa17.44■□□□□ 0.38
SATB1-217ENST00000493952 SURF1Q15526 300 aa17.44■□□□□ 0.38
SATB1-217ENST00000493952 SV2CQ496J9 727 aa17.44■□□□□ 0.38
SATB1-217ENST00000493952 LIN9Q5TKA1 542 aa17.44■□□□□ 0.38
SATB1-217ENST00000493952 OR5B17Q8NGF7 314 aa17.44■□□□□ 0.38
SATB1-217ENST00000493952 ERCC4Q92889 916 aaPredicted RBP17.44■□□□□ 0.38
SATB1-217ENST00000493952 BORCS6Q96GS4 357 aa17.44■□□□□ 0.38
SATB1-217ENST00000493952 ZNF560Q96MR9 790 aa17.44■□□□□ 0.38
SATB1-217ENST00000493952 RHOBTB2Q9BYZ6 727 aa17.44■□□□□ 0.38
SATB1-217ENST00000493952 ITGA11Q9UKX5 1188 aa17.44■□□□□ 0.38
SATB1-217ENST00000493952 AGAP1Q9UPQ3 857 aa17.44■□□□□ 0.38
SATB1-217ENST00000493952 MAPK8IP1Q9UQF2 711 aa17.44■□□□□ 0.38
SATB1-217ENST00000493952 PTPRDP23468 1912 aa17.44■□□□□ 0.38
SATB1-217ENST00000493952 DENND4CQ5VZ89 1909 aa17.43■□□□□ 0.38
SATB1-217ENST00000493952 EXOC3O60645 756 aa17.43■□□□□ 0.38
SATB1-217ENST00000493952 ABLIM3O94929 683 aa17.43■□□□□ 0.38
SATB1-217ENST00000493952 PSMD6Q15008 389 aa17.43■□□□□ 0.38
SATB1-217ENST00000493952 OVOS1Q6IE37 1185 aa17.43■□□□□ 0.38
SATB1-217ENST00000493952 USP37Q86T82 979 aa17.43■□□□□ 0.38
SATB1-217ENST00000493952 WDR49Q8IV35 697 aa17.43■□□□□ 0.38
SATB1-217ENST00000493952 ZNF461Q8TAF7 563 aa17.43■□□□□ 0.38
SATB1-217ENST00000493952 SLC7A14Q8TBB6 771 aa17.43■□□□□ 0.38
SATB1-217ENST00000493952 SMG7Q92540 1137 aaKnown RBP17.43■□□□□ 0.38
SATB1-217ENST00000493952 ANKRD36BP1Q96IX9 119 aa17.43■□□□□ 0.38
SATB1-217ENST00000493952 PRKD2Q9BZL6 878 aa17.43■□□□□ 0.38
SATB1-217ENST00000493952 GZF1Q9H116 711 aaPredicted RBP17.43■□□□□ 0.38
SATB1-217ENST00000493952 TSHZ2Q9NRE2 1034 aa17.43■□□□□ 0.38
SATB1-217ENST00000493952 DMAC2Q9NW81 257 aa17.43■□□□□ 0.38
SATB1-217ENST00000493952 SIX4Q9UIU6 781 aa17.43■□□□□ 0.38
SATB1-217ENST00000493952 OBSL1O75147 1896 aa17.43■□□□□ 0.38
SATB1-217ENST00000493952 KPNA7A9QM74 516 aa17.42■□□□□ 0.38
SATB1-217ENST00000493952 CYB561D2O14569 222 aa17.42■□□□□ 0.38
SATB1-217ENST00000493952 NR3C1P04150 777 aa17.42■□□□□ 0.38
SATB1-217ENST00000493952 KRT19P08727 400 aa17.42■□□□□ 0.38
SATB1-217ENST00000493952 DLATP10515 647 aaKnown RBP17.42■□□□□ 0.38
SATB1-217ENST00000493952 PNPLA4P41247 253 aa17.42■□□□□ 0.38
SATB1-217ENST00000493952 PPM1LQ5SGD2 360 aa17.42■□□□□ 0.38
SATB1-217ENST00000493952 CYP26C1Q6V0L0 522 aa17.42■□□□□ 0.38
SATB1-217ENST00000493952 CCDC149Q6ZUS6 474 aa17.42■□□□□ 0.38
SATB1-217ENST00000493952 RNF135Q8IUD6 432 aa17.42■□□□□ 0.38
SATB1-217ENST00000493952 SLC9A9Q8IVB4 645 aa17.42■□□□□ 0.38
SATB1-217ENST00000493952 SMYD4Q8IYR2 804 aaPredicted RBP17.42■□□□□ 0.38
SATB1-217ENST00000493952 GUF1Q8N442 669 aaKnown RBP17.42■□□□□ 0.38
SATB1-217ENST00000493952 CSGALNACT2Q8N6G5 542 aa17.42■□□□□ 0.38
SATB1-217ENST00000493952 PLEKHO2Q8TD55 490 aa17.42■□□□□ 0.38
SATB1-217ENST00000493952 TMEM174Q8WUU8 243 aa17.42■□□□□ 0.38
SATB1-217ENST00000493952 CCDC127Q96BQ5 260 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms