RNA–Protein interactions for RNA: ENST00000493669.2

PHACTR4-204, Transcript of phosphatase and actin regulator 4, humanhuman

TSL 1 (best)

Gene PHACTR4, Length 3,078 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-204ENST00000493669 C12orf50Q8NA57 414 aaPredicted RBP11.5□□□□□ -0.57
PHACTR4-204ENST00000493669 TSEN2Q8NCE0 465 aaKnown RBP11.5□□□□□ -0.57
PHACTR4-204ENST00000493669 XYLT2Q9H1B5 865 aa11.5□□□□□ -0.57
PHACTR4-204ENST00000493669 CISHQ9NSE2 258 aa11.5□□□□□ -0.57
PHACTR4-204ENST00000493669 AKT3Q9Y243 479 aa11.5□□□□□ -0.57
PHACTR4-204ENST00000493669 A0A087WZ62 844 aa11.5□□□□□ -0.57
PHACTR4-204ENST00000493669 RRN3P2A6NIE6 340 aa11.5□□□□□ -0.57
PHACTR4-204ENST00000493669 PODXLO00592 558 aa11.5□□□□□ -0.57
PHACTR4-204ENST00000493669 TTI1O43156 1089 aa11.5□□□□□ -0.57
PHACTR4-204ENST00000493669 ATICP31939 592 aa11.5□□□□□ -0.57
PHACTR4-204ENST00000493669 CDH5P33151 784 aaPredicted RBP11.5□□□□□ -0.57
PHACTR4-204ENST00000493669 FNTAP49354 379 aa11.5□□□□□ -0.57
PHACTR4-204ENST00000493669 SPDYCQ5MJ68 293 aa11.5□□□□□ -0.57
PHACTR4-204ENST00000493669 CFAP58Q5T655 872 aa11.5□□□□□ -0.57
PHACTR4-204ENST00000493669 NT5DC4Q86YG4 428 aa11.5□□□□□ -0.57
PHACTR4-204ENST00000493669 IQCKQ8N0W5 287 aa11.5□□□□□ -0.57
PHACTR4-204ENST00000493669 C1orf131Q8NDD1 294 aaKnown RBP11.5□□□□□ -0.57
PHACTR4-204ENST00000493669 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.5□□□□□ -0.57
PHACTR4-204ENST00000493669 FDXACB1Q9BRP7 624 aaPredicted RBP11.5□□□□□ -0.57
PHACTR4-204ENST00000493669 FAM129AQ9BZQ8 928 aa11.5□□□□□ -0.57
PHACTR4-204ENST00000493669 PDZD7Q9H5P4 517 aa11.5□□□□□ -0.57
PHACTR4-204ENST00000493669 VRTNQ9H8Y1 702 aa11.5□□□□□ -0.57
PHACTR4-204ENST00000493669 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.5□□□□□ -0.57
PHACTR4-204ENST00000493669 CHORDC1Q9UHD1 332 aaPredicted RBP11.5□□□□□ -0.57
PHACTR4-204ENST00000493669 PSTPIP1O43586 416 aa11.49□□□□□ -0.57
PHACTR4-204ENST00000493669 FAM153BP0C7A2 387 aa11.49□□□□□ -0.57
PHACTR4-204ENST00000493669 ZNF286BP0CG31 522 aa11.49□□□□□ -0.57
PHACTR4-204ENST00000493669 PYGMP11217 842 aa11.49□□□□□ -0.57
PHACTR4-204ENST00000493669 SMPD1P17405 629 aa11.49□□□□□ -0.57
PHACTR4-204ENST00000493669 MMP8P22894 467 aa11.49□□□□□ -0.57
PHACTR4-204ENST00000493669 ASPAP45381 313 aa11.49□□□□□ -0.57
PHACTR4-204ENST00000493669 MTMR3Q13615 1198 aa11.49□□□□□ -0.57
PHACTR4-204ENST00000493669 FAM153CQ494X1 144 aa11.49□□□□□ -0.57
PHACTR4-204ENST00000493669 ZNF771Q7L3S4 317 aaPredicted RBP11.49□□□□□ -0.57
PHACTR4-204ENST00000493669 TMEM35BQ8NCS4 154 aa11.49□□□□□ -0.57
PHACTR4-204ENST00000493669 OR6J1Q8NGC5 347 aa11.49□□□□□ -0.57
PHACTR4-204ENST00000493669 BTBD6Q96KE9 485 aa11.49□□□□□ -0.57
PHACTR4-204ENST00000493669 ERP44Q9BS26 406 aa11.49□□□□□ -0.57
PHACTR4-204ENST00000493669 PARVAQ9NVD7 372 aa11.49□□□□□ -0.57
PHACTR4-204ENST00000493669 FAM153AQ9UHL3 310 aa11.49□□□□□ -0.57
PHACTR4-204ENST00000493669 EVPLQ92817 2033 aa11.49□□□□□ -0.57
PHACTR4-204ENST00000493669 GPR25O00155 361 aa11.49□□□□□ -0.57
PHACTR4-204ENST00000493669 FSCN2O14926 492 aa11.49□□□□□ -0.57
PHACTR4-204ENST00000493669 CELF2O95319 508 aaKnown RBP11.49□□□□□ -0.57
PHACTR4-204ENST00000493669 CALCAP01258 141 aa11.49□□□□□ -0.57
PHACTR4-204ENST00000493669 IQCF3P0C7M6 154 aa11.49□□□□□ -0.57
PHACTR4-204ENST00000493669 STAG3L1P0CL83 205 aa11.49□□□□□ -0.57
PHACTR4-204ENST00000493669 CXCL8P10145 99 aa11.49□□□□□ -0.57
PHACTR4-204ENST00000493669 EIF4BP23588 611 aaKnown RBP11.49□□□□□ -0.57
PHACTR4-204ENST00000493669 TAP1Q03518 808 aa11.49□□□□□ -0.57
PHACTR4-204ENST00000493669 MKRN3Q13064 507 aaKnown RBP11.49□□□□□ -0.57
PHACTR4-204ENST00000493669 GRIK4Q16099 956 aa11.49□□□□□ -0.57
PHACTR4-204ENST00000493669 DUPD1Q68J44 220 aa11.49□□□□□ -0.57
PHACTR4-204ENST00000493669 LRIG3Q6UXM1 1119 aa11.49□□□□□ -0.57
PHACTR4-204ENST00000493669 APBB1IPQ7Z5R6 666 aaPredicted RBP11.49□□□□□ -0.57
PHACTR4-204ENST00000493669 PRELID2Q8N945 189 aa11.49□□□□□ -0.57
PHACTR4-204ENST00000493669 C11orf70Q9BRQ4 267 aa11.49□□□□□ -0.57
PHACTR4-204ENST00000493669 BCO2Q9BYV7 579 aa11.49□□□□□ -0.57
PHACTR4-204ENST00000493669 ERVK-5Q9HDB9 667 aa11.49□□□□□ -0.57
PHACTR4-204ENST00000493669 NR2E1Q9Y466 385 aa11.49□□□□□ -0.57
PHACTR4-204ENST00000493669 CEP83Q9Y592 693 aa11.49□□□□□ -0.57
PHACTR4-204ENST00000493669 UTRNP46939 3433 aa11.49□□□□□ -0.57
PHACTR4-204ENST00000493669 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.49□□□□□ -0.57
PHACTR4-204ENST00000493669 MAMLD1Q13495 774 aa11.49□□□□□ -0.57
PHACTR4-204ENST00000493669 PCBP1Q15365 356 aaKnown RBP eCLIP11.49□□□□□ -0.579e-9■■■■■ 27.3
PHACTR4-204ENST00000493669 PTPN18Q99952 460 aa11.49□□□□□ -0.57
PHACTR4-204ENST00000493669 FAM170AA1A519 330 aa11.48□□□□□ -0.57
PHACTR4-204ENST00000493669 MED7O43513 233 aa11.48□□□□□ -0.57
PHACTR4-204ENST00000493669 STAU1O95793 577 aaKnown RBP11.48□□□□□ -0.57
PHACTR4-204ENST00000493669 PAEPP09466 180 aa11.48□□□□□ -0.57
PHACTR4-204ENST00000493669 GUCY2FP51841 1108 aa11.48□□□□□ -0.57
PHACTR4-204ENST00000493669 ZNF667Q5HYK9 610 aa11.48□□□□□ -0.57
PHACTR4-204ENST00000493669 MMS22LQ6ZRQ5 1243 aa11.48□□□□□ -0.57
PHACTR4-204ENST00000493669 JAMLQ86YT9 394 aa11.48□□□□□ -0.57
PHACTR4-204ENST00000493669 TTC39CQ8N584 583 aa11.48□□□□□ -0.57
PHACTR4-204ENST00000493669 CEP120Q8N960 986 aa11.48□□□□□ -0.57
PHACTR4-204ENST00000493669 SLCO2A1Q92959 643 aa11.48□□□□□ -0.57
PHACTR4-204ENST00000493669 MAGOHBQ96A72 148 aaKnown RBP11.48□□□□□ -0.57
PHACTR4-204ENST00000493669 ZIM3Q96PE6 472 aa11.48□□□□□ -0.57
PHACTR4-204ENST00000493669 FAM204AQ9H8W3 233 aa11.48□□□□□ -0.57
PHACTR4-204ENST00000493669 CYP3A43Q9HB55 503 aa11.48□□□□□ -0.57
PHACTR4-204ENST00000493669 PARP2Q9UGN5 583 aa11.48□□□□□ -0.57
PHACTR4-204ENST00000493669 IP6K2Q9UHH9 426 aa11.48□□□□□ -0.57
PHACTR4-204ENST00000493669 ZHX1Q9UKY1 873 aaPredicted RBP11.48□□□□□ -0.57
PHACTR4-204ENST00000493669 C2CD2Q9Y426 696 aa11.48□□□□□ -0.57
PHACTR4-204ENST00000493669 DAPK3O43293 454 aa11.48□□□□□ -0.57
PHACTR4-204ENST00000493669 P4HA1P13674 534 aa11.48□□□□□ -0.57
PHACTR4-204ENST00000493669 ARF4P18085 180 aaPredicted RBP11.48□□□□□ -0.57
PHACTR4-204ENST00000493669 DCAF4L1Q3SXM0 396 aa11.48□□□□□ -0.57
PHACTR4-204ENST00000493669 PASD1Q8IV76 773 aa11.48□□□□□ -0.57
PHACTR4-204ENST00000493669 RHOT1Q8IXI2 618 aa11.48□□□□□ -0.57
PHACTR4-204ENST00000493669 FEZF2Q8TBJ5 459 aa11.48□□□□□ -0.57
PHACTR4-204ENST00000493669 NLRP7Q8WX94 980 aa11.48□□□□□ -0.57
PHACTR4-204ENST00000493669 ZBTB10Q96DT7 871 aa11.48□□□□□ -0.57
PHACTR4-204ENST00000493669 ADPGKQ9BRR6 497 aa11.48□□□□□ -0.57
PHACTR4-204ENST00000493669 CELF4Q9BZC1 486 aaKnown RBP11.48□□□□□ -0.57
PHACTR4-204ENST00000493669 LHX5Q9H2C1 402 aa11.48□□□□□ -0.57
PHACTR4-204ENST00000493669 PLEKHA4Q9H4M7 779 aa11.48□□□□□ -0.57
PHACTR4-204ENST00000493669 LRRC19Q9H756 370 aa11.48□□□□□ -0.57
PHACTR4-204ENST00000493669 LACTBL1A8MY62 500 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms