RNA–Protein interactions for RNA: ENST00000491881.1

VTA1-204, Transcript of vesicle trafficking 1, humanhuman

TSL 2

Gene VTA1, Length 528 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-204ENST00000491881 CCDC146Q8IYE0 955 aa4.92□□□□□ -1.62
VTA1-204ENST00000491881 HAS1Q92839 578 aa4.92□□□□□ -1.62
VTA1-204ENST00000491881 TNPO1Q92973 898 aaKnown RBP4.92□□□□□ -1.62
VTA1-204ENST00000491881 LRFN3Q9BTN0 628 aa4.92□□□□□ -1.62
VTA1-204ENST00000491881 NDC1Q9BTX1 674 aa4.92□□□□□ -1.62
VTA1-204ENST00000491881 SARS2Q9NP81 518 aaKnown RBP4.92□□□□□ -1.62
VTA1-204ENST00000491881 SLAMF7Q9NQ25 335 aa4.92□□□□□ -1.62
VTA1-204ENST00000491881 SIDT1Q9NXL6 827 aaKnown RBP4.92□□□□□ -1.62
VTA1-204ENST00000491881 PNPLA7Q6ZV29 1317 aa4.92□□□□□ -1.62
VTA1-204ENST00000491881 A0A088AWK7 358 aa4.91□□□□□ -1.62
VTA1-204ENST00000491881 CFAP69A5D8W1 941 aa4.91□□□□□ -1.62
VTA1-204ENST00000491881 CDHR4A6H8M9 788 aa4.91□□□□□ -1.62
VTA1-204ENST00000491881 A6NNZ2 444 aa4.91□□□□□ -1.62
VTA1-204ENST00000491881 NT5C1B-RDH14C9J2C7 533 aa4.91□□□□□ -1.62
VTA1-204ENST00000491881 RHOBTB3O94955 611 aa4.91□□□□□ -1.62
VTA1-204ENST00000491881 ZBED1O96006 694 aa4.91□□□□□ -1.62
VTA1-204ENST00000491881 ITGB1P05556 798 aa4.91□□□□□ -1.62
VTA1-204ENST00000491881 MYL1P05976 194 aa4.91□□□□□ -1.62
VTA1-204ENST00000491881 SBK3P0C264 359 aa4.91□□□□□ -1.62
VTA1-204ENST00000491881 PRDX5P30044 214 aa4.91□□□□□ -1.62
VTA1-204ENST00000491881 AGFG1P52594 562 aaKnown RBP4.91□□□□□ -1.62
VTA1-204ENST00000491881 USP14P54578 494 aa4.91□□□□□ -1.62
VTA1-204ENST00000491881 NKX6-1P78426 367 aaPredicted RBP4.91□□□□□ -1.62
VTA1-204ENST00000491881 UBXN2BQ14CS0 331 aa4.91□□□□□ -1.62
VTA1-204ENST00000491881 KIAA0753Q2KHM9 967 aa4.91□□□□□ -1.62
VTA1-204ENST00000491881 CCDC93Q567U6 631 aa4.91□□□□□ -1.62
VTA1-204ENST00000491881 MED25Q71SY5 747 aa4.91□□□□□ -1.62
VTA1-204ENST00000491881 CHST15Q7LFX5 561 aaPredicted RBP4.91□□□□□ -1.62
VTA1-204ENST00000491881 MRGPREQ86SM8 312 aa4.91□□□□□ -1.62
VTA1-204ENST00000491881 FAM156AQ8NDB6 213 aa4.91□□□□□ -1.62
VTA1-204ENST00000491881 IL17RDQ8NFM7 739 aa4.91□□□□□ -1.62
VTA1-204ENST00000491881 MNTQ99583 582 aa4.91□□□□□ -1.62
VTA1-204ENST00000491881 REXO4Q9GZR2 422 aaKnown RBP4.91□□□□□ -1.62
VTA1-204ENST00000491881 GSTO2Q9H4Y5 243 aa4.91□□□□□ -1.62
VTA1-204ENST00000491881 FBXO34Q9NWN3 711 aa4.91□□□□□ -1.62
VTA1-204ENST00000491881 STAP2Q9UGK3 403 aa4.91□□□□□ -1.62
VTA1-204ENST00000491881 CPA4Q9UI42 421 aa4.91□□□□□ -1.62
VTA1-204ENST00000491881 PCDHA1Q9Y5I3 950 aa4.91□□□□□ -1.62
VTA1-204ENST00000491881 A0A1W2PPL8 197 aa4.9□□□□□ -1.63
VTA1-204ENST00000491881 PLIN1O60240 522 aa4.9□□□□□ -1.63
VTA1-204ENST00000491881 FAM20BO75063 409 aa4.9□□□□□ -1.63
VTA1-204ENST00000491881 HRGP04196 525 aa4.9□□□□□ -1.63
VTA1-204ENST00000491881 RHCEP18577 417 aa4.9□□□□□ -1.63
VTA1-204ENST00000491881 CHN2P52757 468 aa4.9□□□□□ -1.63
VTA1-204ENST00000491881 RABGGTBP53611 331 aa4.9□□□□□ -1.63
VTA1-204ENST00000491881 FAM193AP78312 1265 aa4.9□□□□□ -1.63
VTA1-204ENST00000491881 RHDQ02161 417 aa4.9□□□□□ -1.63
VTA1-204ENST00000491881 TOB2Q14106 344 aaPredicted RBP4.9□□□□□ -1.63
VTA1-204ENST00000491881 CNN3Q15417 329 aaKnown RBP4.9□□□□□ -1.63
VTA1-204ENST00000491881 KHDC1LQ5JSQ8 128 aa4.9□□□□□ -1.63
VTA1-204ENST00000491881 DARS2Q6PI48 645 aaKnown RBP4.9□□□□□ -1.63
VTA1-204ENST00000491881 ZNF365Q70YC5 407 aa4.9□□□□□ -1.63
VTA1-204ENST00000491881 MAEAQ7L5Y9 396 aa4.9□□□□□ -1.63
VTA1-204ENST00000491881 FAM90A1Q86YD7 464 aa4.9□□□□□ -1.63
VTA1-204ENST00000491881 KIAA0319LQ8IZA0 1049 aa4.9□□□□□ -1.63
VTA1-204ENST00000491881 FITM2Q8N6M3 262 aa4.9□□□□□ -1.63
VTA1-204ENST00000491881 GPR150Q8NGU9 434 aa4.9□□□□□ -1.63
VTA1-204ENST00000491881 PLBD2Q8NHP8 589 aa4.9□□□□□ -1.63
VTA1-204ENST00000491881 SLC25A43Q8WUT9 341 aaPredicted RBP4.9□□□□□ -1.63
VTA1-204ENST00000491881 SARGQ9BW04 601 aa4.9□□□□□ -1.63
VTA1-204ENST00000491881 C1orf43Q9BWL3 253 aa4.9□□□□□ -1.63
VTA1-204ENST00000491881 MRPL46Q9H2W6 279 aaKnown RBP4.9□□□□□ -1.63
VTA1-204ENST00000491881 BRD9Q9H8M2 597 aa4.9□□□□□ -1.63
VTA1-204ENST00000491881 FAM30AQ9NZY2 134 aa4.9□□□□□ -1.63
VTA1-204ENST00000491881 JKAMPQ9P055 326 aa4.9□□□□□ -1.63
VTA1-204ENST00000491881 PTGFRNQ9P2B2 879 aa4.9□□□□□ -1.63
VTA1-204ENST00000491881 CFAP97Q9P2B7 532 aa4.9□□□□□ -1.63
VTA1-204ENST00000491881 EIF2B4Q9UI10 523 aaKnown RBP4.9□□□□□ -1.63
VTA1-204ENST00000491881 PCDHA6Q9UN73 950 aa4.9□□□□□ -1.63
VTA1-204ENST00000491881 L1RE1Q9UN81 338 aa4.9□□□□□ -1.63
VTA1-204ENST00000491881 FAM50BQ9Y247 325 aa4.9□□□□□ -1.63
VTA1-204ENST00000491881 KLRG2A4D1S0 409 aaPredicted RBP4.89□□□□□ -1.63
VTA1-204ENST00000491881 DRGXA6NNA5 263 aa4.89□□□□□ -1.63
VTA1-204ENST00000491881 GOLIM4O00461 696 aa4.89□□□□□ -1.63
VTA1-204ENST00000491881 MGEA5O60502 916 aa4.89□□□□□ -1.63
VTA1-204ENST00000491881 SLC43A1O75387 559 aa4.89□□□□□ -1.63
VTA1-204ENST00000491881 RECQL4O94761 1208 aa4.89□□□□□ -1.63
VTA1-204ENST00000491881 LMNAP02545 664 aaKnown RBP4.89□□□□□ -1.63
VTA1-204ENST00000491881 AHSGP02765 367 aa4.89□□□□□ -1.63
VTA1-204ENST00000491881 GNAI2P04899 355 aa4.89□□□□□ -1.63
VTA1-204ENST00000491881 NBPF7P0C2Y1 421 aaPredicted RBP4.89□□□□□ -1.63
VTA1-204ENST00000491881 PROZP22891 400 aa4.89□□□□□ -1.63
VTA1-204ENST00000491881 PHKA1P46020 1223 aa4.89□□□□□ -1.63
VTA1-204ENST00000491881 KCNJ5P48544 419 aa4.89□□□□□ -1.63
VTA1-204ENST00000491881 NHLH2Q02577 135 aa4.89□□□□□ -1.63
VTA1-204ENST00000491881 COBLL1Q53SF7 1204 aa4.89□□□□□ -1.63
VTA1-204ENST00000491881 UTP14CQ5TAP6 766 aaKnown RBP4.89□□□□□ -1.63
VTA1-204ENST00000491881 RNF220Q5VTB9 566 aa4.89□□□□□ -1.63
VTA1-204ENST00000491881 LRCH2Q5VUJ6 765 aa4.89□□□□□ -1.63
VTA1-204ENST00000491881 C1QL3Q5VWW1 255 aa4.89□□□□□ -1.63
VTA1-204ENST00000491881 NAIF1Q69YI7 327 aaPredicted RBP4.89□□□□□ -1.63
VTA1-204ENST00000491881 PPP1R3BQ86XI6 285 aa4.89□□□□□ -1.63
VTA1-204ENST00000491881 TBC1D15Q8TC07 691 aa4.89□□□□□ -1.63
VTA1-204ENST00000491881 LRTOMTQ8WZ04 291 aa4.89□□□□□ -1.63
VTA1-204ENST00000491881 NT5C1BQ96P26 610 aa4.89□□□□□ -1.63
VTA1-204ENST00000491881 RIOX1Q9H6W3 641 aa4.89□□□□□ -1.63
VTA1-204ENST00000491881 ARNT2Q9HBZ2 717 aa4.89□□□□□ -1.63
VTA1-204ENST00000491881 RLIMQ9NVW2 624 aa4.89□□□□□ -1.63
VTA1-204ENST00000491881 PIH1D1Q9NWS0 290 aaKnown RBP4.89□□□□□ -1.63
VTA1-204ENST00000491881 ZNHIT2Q9UHR6 403 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms