RNA–Protein interactions for RNA: ENST00000491165.5

USF3-203, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USF3, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-203ENST00000491165 BORCS6Q96GS4 357 aa24.4■■□□□ 1.5
USF3-203ENST00000491165 FAM213AQ9BRX8 229 aa24.4■■□□□ 1.5
USF3-203ENST00000491165 PACSIN1Q9BY11 444 aa24.4■■□□□ 1.5
USF3-203ENST00000491165 ERVK-5Q9HDB9 667 aa24.4■■□□□ 1.5
USF3-203ENST00000491165 ANK1P16157 1881 aa24.39■■□□□ 1.5
USF3-203ENST00000491165 LAMA3Q16787 3333 aa24.39■■□□□ 1.5
USF3-203ENST00000491165 TRIP11Q15643 1979 aa24.39■■□□□ 1.5
USF3-203ENST00000491165 MGEA5O60502 916 aa24.39■■□□□ 1.49
USF3-203ENST00000491165 RPL13P26373 211 aaKnown RBP24.39■■□□□ 1.49
USF3-203ENST00000491165 IRAK1P51617 712 aa24.39■■□□□ 1.49
USF3-203ENST00000491165 PCBP1Q15365 356 aaKnown RBP eCLIP24.39■■□□□ 1.49
USF3-203ENST00000491165 CAPS2Q9BXY5 557 aa24.39■■□□□ 1.49
USF3-203ENST00000491165 PLCB1Q9NQ66 1216 aa24.39■■□□□ 1.49
USF3-203ENST00000491165 TMEM39AQ9NV64 488 aa24.39■■□□□ 1.49
USF3-203ENST00000491165 ARMCX3Q9UH62 379 aaPredicted RBP24.39■■□□□ 1.49
USF3-203ENST00000491165 CLSTN1O94985 981 aa24.38■■□□□ 1.49
USF3-203ENST00000491165 OSTNP61366 133 aa24.38■■□□□ 1.49
USF3-203ENST00000491165 SNRNP35Q16560 246 aaKnown RBP24.38■■□□□ 1.49
USF3-203ENST00000491165 SLFN12LQ6IEE8 588 aa24.38■■□□□ 1.49
USF3-203ENST00000491165 PLEKHO2Q8TD55 490 aa24.38■■□□□ 1.49
USF3-203ENST00000491165 EPB41L5Q9HCM4 733 aa24.38■■□□□ 1.49
USF3-203ENST00000491165 GUCY2DQ02846 1103 aa24.38■■□□□ 1.49
USF3-203ENST00000491165 MYBPC2Q14324 1141 aa24.38■■□□□ 1.49
USF3-203ENST00000491165 DNAJC21Q5F1R6 531 aaKnown RBP24.38■■□□□ 1.49
USF3-203ENST00000491165 UBXN11Q5T124 520 aa24.38■■□□□ 1.49
USF3-203ENST00000491165 NOTUMQ6P988 496 aa24.38■■□□□ 1.49
USF3-203ENST00000491165 THNSL1Q8IYQ7 743 aa24.38■■□□□ 1.49
USF3-203ENST00000491165 GPD1LQ8N335 351 aa24.38■■□□□ 1.49
USF3-203ENST00000491165 VWCEQ96DN2 955 aa24.38■■□□□ 1.49
USF3-203ENST00000491165 NFU1Q9UMS0 254 aa24.38■■□□□ 1.49
USF3-203ENST00000491165 HES2Q9Y543 173 aa24.38■■□□□ 1.49
USF3-203ENST00000491165 BZW2Q9Y6E2 419 aaKnown RBP24.38■■□□□ 1.49
USF3-203ENST00000491165 MEFVO15553 781 aaPredicted RBP24.37■■□□□ 1.49
USF3-203ENST00000491165 AFPP02771 609 aaKnown RBP24.37■■□□□ 1.49
USF3-203ENST00000491165 CARSP49589 748 aaKnown RBP24.37■■□□□ 1.49
USF3-203ENST00000491165 TCTN1Q2MV58 587 aa24.37■■□□□ 1.49
USF3-203ENST00000491165 ZIM3Q96PE6 472 aa24.37■■□□□ 1.49
USF3-203ENST00000491165 SPAG5Q96R06 1193 aa24.37■■□□□ 1.49
USF3-203ENST00000491165 KRT12Q99456 494 aa24.37■■□□□ 1.49
USF3-203ENST00000491165 PACSIN2Q9UNF0 486 aaPredicted RBP24.37■■□□□ 1.49
USF3-203ENST00000491165 CES2O00748 559 aa24.37■■□□□ 1.49
USF3-203ENST00000491165 NPTXRO95502 500 aa24.37■■□□□ 1.49
USF3-203ENST00000491165 ACTN1P12814 892 aa24.37■■□□□ 1.49
USF3-203ENST00000491165 PTK2Q05397 1052 aa24.37■■□□□ 1.49
USF3-203ENST00000491165 IRF2BP2Q7Z5L9 587 aa24.37■■□□□ 1.49
USF3-203ENST00000491165 FAM186BQ8IYM0 893 aa24.37■■□□□ 1.49
USF3-203ENST00000491165 IFT81Q8WYA0 676 aa24.37■■□□□ 1.49
USF3-203ENST00000491165 TAF4BQ92750 862 aa24.37■■□□□ 1.49
USF3-203ENST00000491165 FAM84AQ96KN4 292 aa24.37■■□□□ 1.49
USF3-203ENST00000491165 PRDM5Q9NQX1 630 aaPredicted RBP24.37■■□□□ 1.49
USF3-203ENST00000491165 SQORQ9Y6N5 450 aa24.37■■□□□ 1.49
USF3-203ENST00000491165 GPR182O15218 404 aa24.36■■□□□ 1.49
USF3-203ENST00000491165 UCHL3P15374 230 aa24.36■■□□□ 1.49
USF3-203ENST00000491165 PSMC2P35998 433 aaKnown RBP24.36■■□□□ 1.49
USF3-203ENST00000491165 DLG4P78352 724 aa24.36■■□□□ 1.49
USF3-203ENST00000491165 TTMPQ5BVD1 217 aa24.36■■□□□ 1.49
USF3-203ENST00000491165 DPY19L2P1Q6NXN4 242 aa24.36■■□□□ 1.49
USF3-203ENST00000491165 SLC27A1Q6PCB7 646 aa24.36■■□□□ 1.49
USF3-203ENST00000491165 FRMD4BQ9Y2L6 1034 aa24.36■■□□□ 1.49
USF3-203ENST00000491165 CITO14578 2027 aa24.36■■□□□ 1.49
USF3-203ENST00000491165 OGTO15294 1046 aa24.35■■□□□ 1.49
USF3-203ENST00000491165 EXTL3O43909 919 aa24.35■■□□□ 1.49
USF3-203ENST00000491165 SLC9A1P19634 815 aa24.35■■□□□ 1.49
USF3-203ENST00000491165 CORO7P57737 925 aa24.35■■□□□ 1.49
USF3-203ENST00000491165 TNNC1P63316 161 aa24.35■■□□□ 1.49
USF3-203ENST00000491165 EXOC3L4Q17RC7 722 aa24.35■■□□□ 1.49
USF3-203ENST00000491165 USP38Q8NB14 1042 aa24.35■■□□□ 1.49
USF3-203ENST00000491165 ARL8AQ96BM9 186 aa24.35■■□□□ 1.49
USF3-203ENST00000491165 CXCL16Q9H2A7 254 aa24.35■■□□□ 1.49
USF3-203ENST00000491165 NXF3Q9H4D5 531 aaKnown RBP24.35■■□□□ 1.49
USF3-203ENST00000491165 ESYT3A0FGR9 886 aa24.35■■□□□ 1.49
USF3-203ENST00000491165 ZSCAN5CA6NGD5 496 aaPredicted RBP24.35■■□□□ 1.49
USF3-203ENST00000491165 SLC16A3O15427 465 aaKnown RBP24.35■■□□□ 1.49
USF3-203ENST00000491165 AXLP30530 894 aa24.35■■□□□ 1.49
USF3-203ENST00000491165 MAGEA9P43362 315 aa24.35■■□□□ 1.49
USF3-203ENST00000491165 RPS6KA1Q15418 735 aa24.35■■□□□ 1.49
USF3-203ENST00000491165 IFI16Q16666 785 aaKnown RBP24.35■■□□□ 1.49
USF3-203ENST00000491165 CFAP58Q5T655 872 aa24.35■■□□□ 1.49
USF3-203ENST00000491165 TWF2Q6IBS0 349 aaKnown RBP24.35■■□□□ 1.49
USF3-203ENST00000491165 ZNF571Q7Z3V5 609 aaPredicted RBP24.35■■□□□ 1.49
USF3-203ENST00000491165 MREGQ8N565 214 aa24.35■■□□□ 1.49
USF3-203ENST00000491165 MKNK1Q9BUB5 465 aa24.35■■□□□ 1.49
USF3-203ENST00000491165 CPSF3Q9UKF6 684 aaKnown RBP24.35■■□□□ 1.49
USF3-203ENST00000491165 CCDC85CA6NKD9 419 aa24.34■■□□□ 1.49
USF3-203ENST00000491165 EIF3HO15372 352 aaKnown RBP eCLIP24.34■■□□□ 1.49
USF3-203ENST00000491165 GNGT1P63211 74 aa24.34■■□□□ 1.49
USF3-203ENST00000491165 RTN4RL1Q86UN2 441 aaPredicted RBP24.34■■□□□ 1.49
USF3-203ENST00000491165 DBF4BQ8NFT6 615 aa24.34■■□□□ 1.49
USF3-203ENST00000491165 LINC01599Q8WXQ3 324 aa24.34■■□□□ 1.49
USF3-203ENST00000491165 A6NNZ2 444 aa24.34■■□□□ 1.49
USF3-203ENST00000491165 MEIS3P2A8K0S8 358 aa24.34■■□□□ 1.49
USF3-203ENST00000491165 FAM153BP0C7A2 387 aa24.34■■□□□ 1.49
USF3-203ENST00000491165 MCF2P10911 925 aa24.34■■□□□ 1.49
USF3-203ENST00000491165 PON1P27169 355 aa24.34■■□□□ 1.49
USF3-203ENST00000491165 SKOR1P84550 965 aa24.34■■□□□ 1.49
USF3-203ENST00000491165 DSC3Q14574 896 aa24.34■■□□□ 1.49
USF3-203ENST00000491165 TUBB8Q3ZCM7 444 aa24.34■■□□□ 1.49
USF3-203ENST00000491165 FAM153CQ494X1 144 aa24.34■■□□□ 1.49
USF3-203ENST00000491165 C1orf220Q5T0J3 134 aa24.34■■□□□ 1.49
USF3-203ENST00000491165 POP1Q99575 1024 aaKnown RBP24.34■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 98.2 ms