RNA–Protein interactions for RNA: ENST00000490692.1

PCSK9-202, Transcript of proprotein convertase subtilisin/kexin type 9, humanhuman

TSL 2

Gene PCSK9, Length 3,891 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCSK9-202ENST00000490692 CPNE8Q86YQ8 564 aa12.12□□□□□ -0.47
PCSK9-202ENST00000490692 TCP10LQ8TDR4 215 aa12.12□□□□□ -0.47
PCSK9-202ENST00000490692 SH3TC2Q8TF17 1288 aa12.12□□□□□ -0.47
PCSK9-202ENST00000490692 ZNF333Q96JL9 665 aa12.12□□□□□ -0.47
PCSK9-202ENST00000490692 TUBGCP5Q96RT8 1024 aa12.12□□□□□ -0.47
PCSK9-202ENST00000490692 ZWILCHQ9H900 591 aa12.12□□□□□ -0.47
PCSK9-202ENST00000490692 C1orf112Q9NSG2 853 aa12.12□□□□□ -0.47
PCSK9-202ENST00000490692 IQANK1A0A1B0GTG1 560 aa12.12□□□□□ -0.47
PCSK9-202ENST00000490692 ZSCAN5DPP0CG00 497 aa12.12□□□□□ -0.47
PCSK9-202ENST00000490692 TCN1P20061 433 aaPredicted RBP12.12□□□□□ -0.47
PCSK9-202ENST00000490692 TMED10P49755 219 aaKnown RBP12.12□□□□□ -0.47
PCSK9-202ENST00000490692 ESRRGP62508 458 aa12.12□□□□□ -0.47
PCSK9-202ENST00000490692 TRIM28Q13263 835 aaKnown RBP12.12□□□□□ -0.47
PCSK9-202ENST00000490692 PARP10Q53GL7 1025 aa12.12□□□□□ -0.47
PCSK9-202ENST00000490692 FAM84BQ96KN1 310 aaPredicted RBP12.12□□□□□ -0.47
PCSK9-202ENST00000490692 ZDHHC18Q9NUE0 388 aa12.12□□□□□ -0.47
PCSK9-202ENST00000490692 BTBD7Q9P203 1132 aa12.12□□□□□ -0.47
PCSK9-202ENST00000490692 APOBEC2Q9Y235 224 aaKnown RBP12.12□□□□□ -0.47
PCSK9-202ENST00000490692 A0A1W2PPM1 405 aa12.12□□□□□ -0.47
PCSK9-202ENST00000490692 E2F8A0AVK6 867 aa12.12□□□□□ -0.47
PCSK9-202ENST00000490692 NDC80O14777 642 aa12.12□□□□□ -0.47
PCSK9-202ENST00000490692 MED24O75448 989 aa12.12□□□□□ -0.47
PCSK9-202ENST00000490692 SEC24DO94855 1032 aaPredicted RBP12.12□□□□□ -0.47
PCSK9-202ENST00000490692 CALCAP01258 141 aa12.12□□□□□ -0.47
PCSK9-202ENST00000490692 MPP2Q14168 576 aa12.12□□□□□ -0.47
PCSK9-202ENST00000490692 TCHHL1Q5QJ38 904 aaPredicted RBP12.12□□□□□ -0.47
PCSK9-202ENST00000490692 WDR75Q8IWA0 830 aaKnown RBP12.12□□□□□ -0.47
PCSK9-202ENST00000490692 RFWD2Q8NHY2 731 aa12.12□□□□□ -0.47
PCSK9-202ENST00000490692 C17orf50Q8WW18 174 aa12.12□□□□□ -0.47
PCSK9-202ENST00000490692 NLRP7Q8WX94 980 aa12.12□□□□□ -0.47
PCSK9-202ENST00000490692 PPP2R3CQ969Q6 453 aa12.12□□□□□ -0.47
PCSK9-202ENST00000490692 SLC35C1Q96A29 364 aa12.12□□□□□ -0.47
PCSK9-202ENST00000490692 TTC25Q96NG3 672 aa12.12□□□□□ -0.47
PCSK9-202ENST00000490692 SLC4A9Q96Q91 983 aa12.12□□□□□ -0.47
PCSK9-202ENST00000490692 CALN1Q9BXU9 219 aa12.12□□□□□ -0.47
PCSK9-202ENST00000490692 MRPL1Q9BYD6 325 aaKnown RBP12.12□□□□□ -0.47
PCSK9-202ENST00000490692 IMPG2Q9BZV3 1241 aa12.12□□□□□ -0.47
PCSK9-202ENST00000490692 GRHL1Q9NZI5 618 aa12.12□□□□□ -0.47
PCSK9-202ENST00000490692 SENP1Q9P0U3 644 aa12.12□□□□□ -0.47
PCSK9-202ENST00000490692 TMEM59LQ9UK28 342 aa12.12□□□□□ -0.47
PCSK9-202ENST00000490692 TDRKHQ9Y2W6 561 aaKnown RBP12.12□□□□□ -0.47
PCSK9-202ENST00000490692 MTO1Q9Y2Z2 717 aaKnown RBP12.12□□□□□ -0.47
PCSK9-202ENST00000490692 LRRC42Q9Y546 428 aa12.12□□□□□ -0.47
PCSK9-202ENST00000490692 TRPM3Q9HCF6 1732 aaPredicted RBP12.12□□□□□ -0.47
PCSK9-202ENST00000490692 A0A0A6YYK5 440 aaPredicted RBP12.12□□□□□ -0.47
PCSK9-202ENST00000490692 F5H423 210 aaPredicted RBP12.12□□□□□ -0.47
PCSK9-202ENST00000490692 WFS1O76024 890 aa12.12□□□□□ -0.47
PCSK9-202ENST00000490692 CYP19A1P11511 503 aaPredicted RBP12.12□□□□□ -0.47
PCSK9-202ENST00000490692 SKIV2L2P42285 1042 aaKnown RBP12.12□□□□□ -0.47
PCSK9-202ENST00000490692 ARL4CP56559 192 aa12.12□□□□□ -0.47
PCSK9-202ENST00000490692 ZNF200P98182 395 aaPredicted RBP12.12□□□□□ -0.47
PCSK9-202ENST00000490692 CCDC15Q0P6D6 951 aa12.12□□□□□ -0.47
PCSK9-202ENST00000490692 C16orf72Q14CZ0 275 aa12.12□□□□□ -0.47
PCSK9-202ENST00000490692 NKX1-1Q15270 411 aaPredicted RBP12.12□□□□□ -0.47
PCSK9-202ENST00000490692 OLFML1Q6UWY5 402 aa12.12□□□□□ -0.47
PCSK9-202ENST00000490692 CLNKQ7Z7G1 428 aa12.12□□□□□ -0.47
PCSK9-202ENST00000490692 DCUN1D5Q9BTE7 237 aa12.12□□□□□ -0.47
PCSK9-202ENST00000490692 CADM1Q9BY67 442 aaKnown RBP12.12□□□□□ -0.47
PCSK9-202ENST00000490692 STARD13Q9Y3M8 1113 aa12.12□□□□□ -0.47
PCSK9-202ENST00000490692 MYH15Q9Y2K3 1946 aa12.11□□□□□ -0.47
PCSK9-202ENST00000490692 H7C0C1 242 aa12.11□□□□□ -0.47
PCSK9-202ENST00000490692 BANF1O75531 89 aa12.11□□□□□ -0.47
PCSK9-202ENST00000490692 SSTR1P30872 391 aa12.11□□□□□ -0.47
PCSK9-202ENST00000490692 ATP5OP48047 213 aa12.11□□□□□ -0.47
PCSK9-202ENST00000490692 FXR2P51116 673 aaKnown RBP eCLIP12.11□□□□□ -0.475e-8■■□□□ 14.5
PCSK9-202ENST00000490692 HIRAP54198 1017 aaPredicted RBP12.11□□□□□ -0.47
PCSK9-202ENST00000490692 NPEPPSP55786 919 aa12.11□□□□□ -0.47
PCSK9-202ENST00000490692 PPIDQ08752 370 aaKnown RBP12.11□□□□□ -0.47
PCSK9-202ENST00000490692 ZNF394Q53GI3 561 aa12.11□□□□□ -0.47
PCSK9-202ENST00000490692 FAM102BQ5T8I3 360 aa12.11□□□□□ -0.47
PCSK9-202ENST00000490692 C12orf60Q5U649 245 aa12.11□□□□□ -0.47
PCSK9-202ENST00000490692 LPCAT4Q643R3 524 aa12.11□□□□□ -0.47
PCSK9-202ENST00000490692 RBM44Q6ZP01 1051 aaKnown RBP12.11□□□□□ -0.47
PCSK9-202ENST00000490692 ZNF804AQ7Z570 1209 aa12.11□□□□□ -0.47
PCSK9-202ENST00000490692 CATSPER2Q96P56 530 aa12.11□□□□□ -0.47
PCSK9-202ENST00000490692 WWP1Q9H0M0 922 aa12.11□□□□□ -0.47
PCSK9-202ENST00000490692 WHRNQ9P202 907 aa12.11□□□□□ -0.47
PCSK9-202ENST00000490692 MAGED2Q9UNF1 606 aaPredicted RBP12.11□□□□□ -0.47
PCSK9-202ENST00000490692 SCINQ9Y6U3 715 aa12.11□□□□□ -0.47
PCSK9-202ENST00000490692 GSC2O15499 205 aa12.11□□□□□ -0.47
PCSK9-202ENST00000490692 RRM1P23921 792 aa12.11□□□□□ -0.47
PCSK9-202ENST00000490692 KLRK1P26718 216 aa12.11□□□□□ -0.47
PCSK9-202ENST00000490692 KRT81Q14533 505 aa12.11□□□□□ -0.47
PCSK9-202ENST00000490692 SLC5A9Q2M3M2 681 aa12.11□□□□□ -0.47
PCSK9-202ENST00000490692 CERKLQ49MI3 558 aaPredicted RBP12.11□□□□□ -0.47
PCSK9-202ENST00000490692 ATG16L1Q676U5 607 aa12.11□□□□□ -0.47
PCSK9-202ENST00000490692 RIPOR1Q6ZS17 1223 aa12.11□□□□□ -0.47
PCSK9-202ENST00000490692 NCAPG2Q86XI2 1143 aa12.11□□□□□ -0.47
PCSK9-202ENST00000490692 SLF2Q8IX21 1173 aa12.11□□□□□ -0.47
PCSK9-202ENST00000490692 RASGEF1CQ8N431 466 aa12.11□□□□□ -0.47
PCSK9-202ENST00000490692 CELF1Q92879 486 aaKnown RBP12.11□□□□□ -0.47
PCSK9-202ENST00000490692 PRPF18Q99633 342 aaKnown RBP12.11□□□□□ -0.47
PCSK9-202ENST00000490692 SENP7Q9BQF6 1050 aa12.11□□□□□ -0.47
PCSK9-202ENST00000490692 ADAM7Q9H2U9 754 aa12.11□□□□□ -0.47
PCSK9-202ENST00000490692 UNC45AQ9H3U1 944 aa12.11□□□□□ -0.47
PCSK9-202ENST00000490692 IL17RBQ9NRM6 502 aa12.11□□□□□ -0.47
PCSK9-202ENST00000490692 LRRC4BQ9NT99 713 aa12.11□□□□□ -0.47
PCSK9-202ENST00000490692 DTNAQ9Y4J8 743 aa12.11□□□□□ -0.47
PCSK9-202ENST00000490692 MYH7BA7E2Y1 1941 aa12.11□□□□□ -0.47
PCSK9-202ENST00000490692 FAM237BA0A1B0GVD1 139 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms