RNA–Protein interactions for RNA: ENST00000489948.5

TRAIP-210, Transcript of TRAF interacting protein, humanhuman

TSL 4

Gene TRAIP, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-210ENST00000489948 DDHD2O94830 711 aa14.34□□□□□ -0.11
TRAIP-210ENST00000489948 UPP2O95045 317 aa14.34□□□□□ -0.11
TRAIP-210ENST00000489948 MFAP3P55082 362 aa14.34□□□□□ -0.11
TRAIP-210ENST00000489948 GSDMDP57764 484 aa14.34□□□□□ -0.11
TRAIP-210ENST00000489948 LILRA4P59901 499 aa14.34□□□□□ -0.11
TRAIP-210ENST00000489948 POLR2FP61218 127 aaKnown RBP14.34□□□□□ -0.11
TRAIP-210ENST00000489948 ZBED6P86452 979 aa14.34□□□□□ -0.11
TRAIP-210ENST00000489948 CUL2Q13617 745 aa14.34□□□□□ -0.11
TRAIP-210ENST00000489948 SCARA3Q6AZY7 606 aa14.34□□□□□ -0.11
TRAIP-210ENST00000489948 IQCEQ6IPM2 695 aa14.34□□□□□ -0.11
TRAIP-210ENST00000489948 PPFIBP1Q86W92 1011 aa14.34□□□□□ -0.11
TRAIP-210ENST00000489948 ZNF280BQ86YH2 543 aa14.34□□□□□ -0.11
TRAIP-210ENST00000489948 HERC6Q8IVU3 1022 aa14.34□□□□□ -0.11
TRAIP-210ENST00000489948 ARHGEF19Q8IW93 802 aa14.34□□□□□ -0.11
TRAIP-210ENST00000489948 TMEM130Q8N3G9 435 aa14.34□□□□□ -0.11
TRAIP-210ENST00000489948 PPM1KQ8N3J5 372 aa14.34□□□□□ -0.11
TRAIP-210ENST00000489948 TTC39CQ8N584 583 aa14.34□□□□□ -0.11
TRAIP-210ENST00000489948 UBR7Q8N806 425 aa14.34□□□□□ -0.11
TRAIP-210ENST00000489948 C3orf58Q8NDZ4 430 aa14.34□□□□□ -0.11
TRAIP-210ENST00000489948 SPATA18Q8TC71 538 aa14.34□□□□□ -0.11
TRAIP-210ENST00000489948 SHC3Q92529 594 aa14.34□□□□□ -0.11
TRAIP-210ENST00000489948 FAM193BQ96PV7 902 aaPredicted RBP14.34□□□□□ -0.11
TRAIP-210ENST00000489948 NRDE2Q9H7Z3 1164 aa14.34□□□□□ -0.11
TRAIP-210ENST00000489948 CYP3A43Q9HB55 503 aa14.34□□□□□ -0.11
TRAIP-210ENST00000489948 NLRC5Q86WI3 1866 aa14.33□□□□□ -0.11
TRAIP-210ENST00000489948 GBF1Q92538 1859 aa14.33□□□□□ -0.11
TRAIP-210ENST00000489948 ARHGEF37A1IGU5 675 aa14.33□□□□□ -0.12
TRAIP-210ENST00000489948 F8VZ95 297 aa14.33□□□□□ -0.12
TRAIP-210ENST00000489948 TULP1O00294 542 aaPredicted RBP14.33□□□□□ -0.12
TRAIP-210ENST00000489948 FAM163BP0C2L3 166 aa14.33□□□□□ -0.12
TRAIP-210ENST00000489948 ATP2A2P16615 1042 aaKnown RBP14.33□□□□□ -0.12
TRAIP-210ENST00000489948 FXR1P51114 621 aaKnown RBP eCLIP14.33□□□□□ -0.12
TRAIP-210ENST00000489948 YWHAEP62258 255 aaKnown RBP14.33□□□□□ -0.12
TRAIP-210ENST00000489948 TNNC1P63316 161 aa14.33□□□□□ -0.12
TRAIP-210ENST00000489948 APBA1Q02410 837 aa14.33□□□□□ -0.12
TRAIP-210ENST00000489948 INCA1Q0VD86 236 aa14.33□□□□□ -0.12
TRAIP-210ENST00000489948 SPOPLQ6IQ16 392 aa14.33□□□□□ -0.12
TRAIP-210ENST00000489948 DCLRE1AQ6PJP8 1040 aa14.33□□□□□ -0.12
TRAIP-210ENST00000489948 DPH6Q7L8W6 267 aa14.33□□□□□ -0.12
TRAIP-210ENST00000489948 CACNA2D4Q7Z3S7 1137 aa14.33□□□□□ -0.12
TRAIP-210ENST00000489948 DRC7Q8IY82 874 aa14.33□□□□□ -0.12
TRAIP-210ENST00000489948 TOP6BLQ8N6T0 577 aa14.33□□□□□ -0.12
TRAIP-210ENST00000489948 ZNF397Q8NF99 534 aaPredicted RBP14.33□□□□□ -0.12
TRAIP-210ENST00000489948 SYN2Q92777 582 aaPredicted RBP14.33□□□□□ -0.12
TRAIP-210ENST00000489948 TATDN2Q93075 761 aa14.33□□□□□ -0.12
TRAIP-210ENST00000489948 KREMEN1Q96MU8 473 aa14.33□□□□□ -0.12
TRAIP-210ENST00000489948 YME1L1Q96TA2 773 aa14.33□□□□□ -0.12
TRAIP-210ENST00000489948 DNAJC7Q99615 494 aa14.33□□□□□ -0.12
TRAIP-210ENST00000489948 RAD9AQ99638 391 aa14.33□□□□□ -0.12
TRAIP-210ENST00000489948 PAAF1Q9BRP4 392 aa14.33□□□□□ -0.12
TRAIP-210ENST00000489948 STK33Q9BYT3 514 aa14.33□□□□□ -0.12
TRAIP-210ENST00000489948 GPR88Q9GZN0 384 aa14.33□□□□□ -0.12
TRAIP-210ENST00000489948 CWH43Q9H720 699 aa14.33□□□□□ -0.12
TRAIP-210ENST00000489948 DNAJB4Q9UDY4 337 aa14.33□□□□□ -0.12
TRAIP-210ENST00000489948 DNAJC12Q9UKB3 198 aa14.33□□□□□ -0.12
TRAIP-210ENST00000489948 AJAP1Q9UKB5 411 aaPredicted RBP14.33□□□□□ -0.12
TRAIP-210ENST00000489948 CNTN6Q9UQ52 1028 aa14.33□□□□□ -0.12
TRAIP-210ENST00000489948 LUC7L2Q9Y383 392 aaKnown RBP14.33□□□□□ -0.12
TRAIP-210ENST00000489948 INSL6Q9Y581 213 aa14.33□□□□□ -0.12
TRAIP-210ENST00000489948 CHD9Q3L8U1 2897 aa14.32□□□□□ -0.12
TRAIP-210ENST00000489948 KPNA7A9QM74 516 aa14.32□□□□□ -0.12
TRAIP-210ENST00000489948 AKR1B15C9JRZ8 316 aaPredicted RBP14.32□□□□□ -0.12
TRAIP-210ENST00000489948 M0QZQ0 153 aa14.32□□□□□ -0.12
TRAIP-210ENST00000489948 SPTLC1O15269 473 aa14.32□□□□□ -0.12
TRAIP-210ENST00000489948 TACC1O75410 805 aa14.32□□□□□ -0.12
TRAIP-210ENST00000489948 KIF4AO95239 1232 aa14.32□□□□□ -0.12
TRAIP-210ENST00000489948 LAG3P18627 525 aa14.32□□□□□ -0.12
TRAIP-210ENST00000489948 FECHP22830 423 aa14.32□□□□□ -0.12
TRAIP-210ENST00000489948 HNRNPH3P31942 346 aaKnown RBP14.32□□□□□ -0.12
TRAIP-210ENST00000489948 CASP14P31944 242 aa14.32□□□□□ -0.12
TRAIP-210ENST00000489948 BMP8BP34820 402 aa14.32□□□□□ -0.12
TRAIP-210ENST00000489948 BTG3Q14201 252 aaPredicted RBP14.32□□□□□ -0.12
TRAIP-210ENST00000489948 WDR72Q3MJ13 1102 aa14.32□□□□□ -0.12
TRAIP-210ENST00000489948 PAN2Q504Q3 1202 aaKnown RBP14.32□□□□□ -0.12
TRAIP-210ENST00000489948 PDXDC1Q6P996 788 aa14.32□□□□□ -0.12
TRAIP-210ENST00000489948 GJB7Q6PEY0 223 aa14.32□□□□□ -0.12
TRAIP-210ENST00000489948 CD300LGQ6UXG3 332 aa14.32□□□□□ -0.12
TRAIP-210ENST00000489948 TC2NQ8N9U0 490 aa14.32□□□□□ -0.12
TRAIP-210ENST00000489948 CLP1Q92989 425 aaKnown RBP14.32□□□□□ -0.12
TRAIP-210ENST00000489948 SUSD3Q96L08 255 aa14.32□□□□□ -0.12
TRAIP-210ENST00000489948 RNPC3Q96LT9 517 aaKnown RBP14.32□□□□□ -0.12
TRAIP-210ENST00000489948 UBE2TQ9NPD8 197 aaPredicted RBP14.32□□□□□ -0.12
TRAIP-210ENST00000489948 MARCH5Q9NX47 278 aa14.32□□□□□ -0.12
TRAIP-210ENST00000489948 VWA8A3KMH1 1905 aa14.31□□□□□ -0.12
TRAIP-210ENST00000489948 NRP1O14786 923 aa14.31□□□□□ -0.12
TRAIP-210ENST00000489948 B3GAT3O94766 335 aa14.31□□□□□ -0.12
TRAIP-210ENST00000489948 CYP11A1P05108 521 aa14.31□□□□□ -0.12
TRAIP-210ENST00000489948 GALTP07902 379 aa14.31□□□□□ -0.12
TRAIP-210ENST00000489948 ACO1P21399 889 aaKnown RBP14.31□□□□□ -0.12
TRAIP-210ENST00000489948 KRT9P35527 623 aa14.31□□□□□ -0.12
TRAIP-210ENST00000489948 OR1G1P47890 313 aa14.31□□□□□ -0.12
TRAIP-210ENST00000489948 SLC11A1P49279 550 aa14.31□□□□□ -0.12
TRAIP-210ENST00000489948 LRMPQ12912 555 aa14.31□□□□□ -0.12
TRAIP-210ENST00000489948 RAPGEF1Q13905 1077 aa14.31□□□□□ -0.12
TRAIP-210ENST00000489948 C9orf50Q5SZB4 431 aa14.31□□□□□ -0.12
TRAIP-210ENST00000489948 RRAGAQ7L523 313 aa14.31□□□□□ -0.12
TRAIP-210ENST00000489948 TMCO2Q7Z6W1 182 aaPredicted RBP14.31□□□□□ -0.12
TRAIP-210ENST00000489948 TMEM86AQ8N2M4 240 aa14.31□□□□□ -0.12
TRAIP-210ENST00000489948 SPC24Q8NBT2 197 aa14.31□□□□□ -0.12
TRAIP-210ENST00000489948 SPAG5Q96R06 1193 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms