RNA–Protein interactions for RNA: ENST00000489180.6

NPHP4-209, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 5,548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-209ENST00000489180 OTULINQ96BN8 352 aa18.46■□□□□ 0.55
NPHP4-209ENST00000489180 TNIP3Q96KP6 325 aa18.46■□□□□ 0.55
NPHP4-209ENST00000489180 ASCC2Q9H1I8 757 aaPredicted RBP18.46■□□□□ 0.55
NPHP4-209ENST00000489180 PRKAG2Q9UGJ0 569 aa18.46■□□□□ 0.55
NPHP4-209ENST00000489180 ZCCHC11Q5TAX3 1644 aaKnown RBP18.46■□□□□ 0.55
NPHP4-209ENST00000489180 TXNP10599 105 aaKnown RBP18.46■□□□□ 0.55
NPHP4-209ENST00000489180 RALAP11233 206 aa18.46■□□□□ 0.55
NPHP4-209ENST00000489180 KCNA4P22459 653 aa18.46■□□□□ 0.55
NPHP4-209ENST00000489180 PMS1P54277 932 aaKnown RBP18.46■□□□□ 0.55
NPHP4-209ENST00000489180 OVGP1Q12889 678 aa18.46■□□□□ 0.55
NPHP4-209ENST00000489180 PDAP1Q13442 181 aaKnown RBP18.46■□□□□ 0.55
NPHP4-209ENST00000489180 THEMIS2Q5TEJ8 643 aa18.46■□□□□ 0.55
NPHP4-209ENST00000489180 SP8Q8IXZ3 490 aa18.46■□□□□ 0.55
NPHP4-209ENST00000489180 FAM71DQ8N9W8 422 aa18.46■□□□□ 0.55
NPHP4-209ENST00000489180 OR9Q1Q8NGQ5 310 aa18.46■□□□□ 0.55
NPHP4-209ENST00000489180 SH3KBP1Q96B97 665 aa18.46■□□□□ 0.55
NPHP4-209ENST00000489180 HERC5Q9UII4 1024 aaKnown RBP18.46■□□□□ 0.55
NPHP4-209ENST00000489180 ADCY3O60266 1144 aa18.46■□□□□ 0.55
NPHP4-209ENST00000489180 DNAJC3Q13217 504 aa18.46■□□□□ 0.55
NPHP4-209ENST00000489180 IL1RL2Q9HB29 575 aa18.46■□□□□ 0.55
NPHP4-209ENST00000489180 CST8O60676 142 aa18.45■□□□□ 0.54
NPHP4-209ENST00000489180 MYL2P10916 166 aa18.45■□□□□ 0.54
NPHP4-209ENST00000489180 HNRNPH1P31943 449 aaKnown RBP18.45■□□□□ 0.54
NPHP4-209ENST00000489180 BTKQ06187 659 aa18.45■□□□□ 0.54
NPHP4-209ENST00000489180 CHI3L2Q15782 390 aa18.45■□□□□ 0.54
NPHP4-209ENST00000489180 EPS8L3Q8TE67 593 aaKnown RBP18.45■□□□□ 0.54
NPHP4-209ENST00000489180 ARHGEF38Q9NXL2 777 aa18.45■□□□□ 0.54
NPHP4-209ENST00000489180 HMBSP08397 361 aa18.45■□□□□ 0.54
NPHP4-209ENST00000489180 MAP4P27816 1152 aaKnown RBP18.45■□□□□ 0.54
NPHP4-209ENST00000489180 EMC2Q15006 297 aa18.45■□□□□ 0.54
NPHP4-209ENST00000489180 C6orf10Q5SRN2 563 aa18.45■□□□□ 0.54
NPHP4-209ENST00000489180 BTNL9Q6UXG8 535 aa18.45■□□□□ 0.54
NPHP4-209ENST00000489180 KCNB2Q92953 911 aa18.45■□□□□ 0.54
NPHP4-209ENST00000489180 SH3GL3Q99963 347 aa18.45■□□□□ 0.54
NPHP4-209ENST00000489180 ZBED2Q9BTP6 218 aa18.45■□□□□ 0.54
NPHP4-209ENST00000489180 CXorf56Q9H5V9 222 aa18.45■□□□□ 0.54
NPHP4-209ENST00000489180 JMJD4Q9H9V9 463 aa18.45■□□□□ 0.54
NPHP4-209ENST00000489180 PSD3Q9NYI0 1048 aa18.45■□□□□ 0.54
NPHP4-209ENST00000489180 PKD2L2Q9NZM6 624 aa18.45■□□□□ 0.54
NPHP4-209ENST00000489180 SPDYAQ5MJ70 313 aa18.45■□□□□ 0.54
NPHP4-209ENST00000489180 APPL2Q8NEU8 664 aa18.45■□□□□ 0.54
NPHP4-209ENST00000489180 TEX12Q9BXU0 123 aa18.45■□□□□ 0.54
NPHP4-209ENST00000489180 SHCBP1LQ9BZQ2 653 aa18.45■□□□□ 0.54
NPHP4-209ENST00000489180 DDX28Q9NUL7 540 aaKnown RBP18.45■□□□□ 0.54
NPHP4-209ENST00000489180 EEF2KO00418 725 aaKnown RBP18.45■□□□□ 0.54
NPHP4-209ENST00000489180 KDM1AO60341 852 aa18.45■□□□□ 0.54
NPHP4-209ENST00000489180 GTF2H1P32780 548 aa18.45■□□□□ 0.54
NPHP4-209ENST00000489180 NEK2P51955 445 aa18.45■□□□□ 0.54
NPHP4-209ENST00000489180 TMEM62Q0P6H9 643 aa18.45■□□□□ 0.54
NPHP4-209ENST00000489180 TRIM28Q13263 835 aaKnown RBP18.45■□□□□ 0.54
NPHP4-209ENST00000489180 SGSM1Q2NKQ1 1148 aa18.45■□□□□ 0.54
NPHP4-209ENST00000489180 XKR3Q5GH77 459 aa18.45■□□□□ 0.54
NPHP4-209ENST00000489180 MROH9Q5TGP6 573 aa18.45■□□□□ 0.54
NPHP4-209ENST00000489180 TPCN2Q8NHX9 752 aa18.45■□□□□ 0.54
NPHP4-209ENST00000489180 ROPN1BQ9BZX4 212 aaPredicted RBP18.45■□□□□ 0.54
NPHP4-209ENST00000489180 ROPN1Q9HAT0 212 aaPredicted RBP18.45■□□□□ 0.54
NPHP4-209ENST00000489180 PRR12Q9ULL5 1215 aa18.45■□□□□ 0.54
NPHP4-209ENST00000489180 MTO1Q9Y2Z2 717 aaKnown RBP18.45■□□□□ 0.54
NPHP4-209ENST00000489180 HMOX2P30519 316 aa18.45■□□□□ 0.54
NPHP4-209ENST00000489180 TMEM132DQ14C87 1099 aa18.45■□□□□ 0.54
NPHP4-209ENST00000489180 TTC39BQ5VTQ0 682 aaPredicted RBP18.45■□□□□ 0.54
NPHP4-209ENST00000489180 OLFML2BQ68BL8 750 aa18.45■□□□□ 0.54
NPHP4-209ENST00000489180 GPAT2Q6NUI2 795 aa18.45■□□□□ 0.54
NPHP4-209ENST00000489180 LAYNQ6UX15 382 aa18.45■□□□□ 0.54
NPHP4-209ENST00000489180 BRD2P25440 801 aaKnown RBP18.44■□□□□ 0.54
NPHP4-209ENST00000489180 DMC1Q14565 340 aa18.44■□□□□ 0.54
NPHP4-209ENST00000489180 C16orf86Q6ZW13 317 aa18.44■□□□□ 0.54
NPHP4-209ENST00000489180 SLC25A41Q8N5S1 370 aa18.44■□□□□ 0.54
NPHP4-209ENST00000489180 TIPINQ9BVW5 301 aa18.44■□□□□ 0.54
NPHP4-209ENST00000489180 METTL5Q9NRN9 209 aaKnown RBP18.44■□□□□ 0.54
NPHP4-209ENST00000489180 KIF1CO43896 1103 aaKnown RBP18.44■□□□□ 0.54
NPHP4-209ENST00000489180 SRP72O76094 671 aaKnown RBP18.44■□□□□ 0.54
NPHP4-209ENST00000489180 UBE3AQ05086 875 aa18.44■□□□□ 0.54
NPHP4-209ENST00000489180 ASAP3Q8TDY4 903 aa18.44■□□□□ 0.54
NPHP4-209ENST00000489180 V9GYQ6 96 aa18.44■□□□□ 0.54
NPHP4-209ENST00000489180 LRRIQ3A6PVS8 624 aaPredicted RBP18.44■□□□□ 0.54
NPHP4-209ENST00000489180 CORO7P57737 925 aa18.44■□□□□ 0.54
NPHP4-209ENST00000489180 PTK2BQ14289 1009 aa18.44■□□□□ 0.54
NPHP4-209ENST00000489180 ZNF772Q68DY9 489 aaPredicted RBP18.44■□□□□ 0.54
NPHP4-209ENST00000489180 C16orf89Q6UX73 402 aa18.44■□□□□ 0.54
NPHP4-209ENST00000489180 CLEC4FQ8N1N0 589 aa18.44■□□□□ 0.54
NPHP4-209ENST00000489180 TRIM54Q9BYV2 358 aa18.44■□□□□ 0.54
NPHP4-209ENST00000489180 ZNF212Q9UDV6 495 aa18.44■□□□□ 0.54
NPHP4-209ENST00000489180 TJP2Q9UDY2 1190 aa18.44■□□□□ 0.54
NPHP4-209ENST00000489180 CDYLQ9Y232 598 aa18.44■□□□□ 0.54
NPHP4-209ENST00000489180 SERPINB9P50453 376 aa18.44■□□□□ 0.54
NPHP4-209ENST00000489180 RBP5P82980 135 aa18.44■□□□□ 0.54
NPHP4-209ENST00000489180 ELMOD1Q8N336 334 aa18.44■□□□□ 0.54
NPHP4-209ENST00000489180 ATPAF2Q8N5M1 289 aa18.44■□□□□ 0.54
NPHP4-209ENST00000489180 ZNF555Q8NEP9 628 aa18.44■□□□□ 0.54
NPHP4-209ENST00000489180 WDR35Q9P2L0 1181 aa18.44■□□□□ 0.54
NPHP4-209ENST00000489180 MYO1GB0I1T2 1018 aa18.43■□□□□ 0.54
NPHP4-209ENST00000489180 XPO1O14980 1071 aaKnown RBP18.43■□□□□ 0.54
NPHP4-209ENST00000489180 SLC37A4O43826 429 aa18.43■□□□□ 0.54
NPHP4-209ENST00000489180 CDC42EP5Q6NZY7 148 aa18.43■□□□□ 0.54
NPHP4-209ENST00000489180 SCAF8Q9UPN6 1271 aaKnown RBP18.43■□□□□ 0.54
NPHP4-209ENST00000489180 CROCC2H7BZ55 1655 aa18.43■□□□□ 0.54
NPHP4-209ENST00000489180 TBX3O15119 743 aa18.43■□□□□ 0.54
NPHP4-209ENST00000489180 KCNK16Q96T55 309 aa18.43■□□□□ 0.54
NPHP4-209ENST00000489180 FUT8Q9BYC5 575 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms