RNA–Protein interactions for RNA: ENST00000489111.1

USP11-211, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 516 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-211ENST00000489111 ACO1P21399 889 aaKnown RBP10.72□□□□□ -0.69
USP11-211ENST00000489111 CLCN1P35523 988 aa10.72□□□□□ -0.69
USP11-211ENST00000489111 CDR2Q01850 454 aa10.72□□□□□ -0.69
USP11-211ENST00000489111 FAAP100Q0VG06 881 aa10.72□□□□□ -0.69
USP11-211ENST00000489111 ZBTB6Q15916 424 aa10.72□□□□□ -0.69
USP11-211ENST00000489111 SV2CQ496J9 727 aa10.72□□□□□ -0.69
USP11-211ENST00000489111 CCDC122Q5T0U0 273 aa10.72□□□□□ -0.69
USP11-211ENST00000489111 TAF3Q5VWG9 929 aa10.72□□□□□ -0.69
USP11-211ENST00000489111 C9orf57Q5W0N0 161 aa10.72□□□□□ -0.69
USP11-211ENST00000489111 GLB1LQ6UWU2 654 aa10.72□□□□□ -0.69
USP11-211ENST00000489111 AGMOQ6ZNB7 445 aa10.72□□□□□ -0.69
USP11-211ENST00000489111 SLC24A5Q71RS6 500 aa10.72□□□□□ -0.69
USP11-211ENST00000489111 NECAB2Q7Z6G3 386 aa10.72□□□□□ -0.69
USP11-211ENST00000489111 NOP9Q86U38 636 aaKnown RBP10.72□□□□□ -0.69
USP11-211ENST00000489111 SLC47A2Q86VL8 602 aa10.72□□□□□ -0.69
USP11-211ENST00000489111 ZNF677Q86XU0 584 aa10.72□□□□□ -0.69
USP11-211ENST00000489111 RPUSD2Q8IZ73 545 aaKnown RBP10.72□□□□□ -0.69
USP11-211ENST00000489111 TTC39CQ8N584 583 aa10.72□□□□□ -0.69
USP11-211ENST00000489111 CXorf38Q8TB03 319 aa10.72□□□□□ -0.69
USP11-211ENST00000489111 SLC20A1Q8WUM9 679 aa10.72□□□□□ -0.69
USP11-211ENST00000489111 PAWRQ96IZ0 340 aaKnown RBP10.72□□□□□ -0.69
USP11-211ENST00000489111 PPP1R10Q96QC0 940 aaKnown RBP10.72□□□□□ -0.69
USP11-211ENST00000489111 MMS19Q96T76 1030 aa10.72□□□□□ -0.69
USP11-211ENST00000489111 BCO2Q9BYV7 579 aa10.72□□□□□ -0.69
USP11-211ENST00000489111 CXCL16Q9H2A7 254 aa10.72□□□□□ -0.69
USP11-211ENST00000489111 TSPYL2Q9H2G4 693 aaPredicted RBP10.72□□□□□ -0.69
USP11-211ENST00000489111 PDCL3Q9H2J4 239 aa10.72□□□□□ -0.69
USP11-211ENST00000489111 SMYD3Q9H7B4 428 aa10.72□□□□□ -0.69
USP11-211ENST00000489111 RGS18Q9NS28 235 aa10.72□□□□□ -0.69
USP11-211ENST00000489111 CISHQ9NSE2 258 aa10.72□□□□□ -0.69
USP11-211ENST00000489111 RNF19AQ9NV58 838 aa10.72□□□□□ -0.69
USP11-211ENST00000489111 TMEM39AQ9NV64 488 aa10.72□□□□□ -0.69
USP11-211ENST00000489111 PUF60Q9UHX1 559 aaKnown RBP10.72□□□□□ -0.69
USP11-211ENST00000489111 NOCTQ9UK39 431 aaKnown RBP10.72□□□□□ -0.69
USP11-211ENST00000489111 INPP5FQ9Y2H2 1132 aa10.72□□□□□ -0.69
USP11-211ENST00000489111 ANO9A1A5B4 782 aa10.71□□□□□ -0.69
USP11-211ENST00000489111 MEIS3P2A8K0S8 358 aa10.71□□□□□ -0.69
USP11-211ENST00000489111 DDX3XO00571 662 aaKnown RBP eCLIP10.71□□□□□ -0.69
USP11-211ENST00000489111 ZNF263O14978 683 aa10.71□□□□□ -0.69
USP11-211ENST00000489111 NBNO60934 754 aa10.71□□□□□ -0.69
USP11-211ENST00000489111 PCNTO95613 3336 aa10.71□□□□□ -0.69
USP11-211ENST00000489111 EOMESO95936 686 aa10.71□□□□□ -0.69
USP11-211ENST00000489111 TUBB4AP04350 444 aa10.71□□□□□ -0.69
USP11-211ENST00000489111 CLTBP09497 229 aa10.71□□□□□ -0.69
USP11-211ENST00000489111 TNNT1P13805 278 aa10.71□□□□□ -0.69
USP11-211ENST00000489111 GNA15P30679 374 aa10.71□□□□□ -0.69
USP11-211ENST00000489111 RAP1GAPP47736 663 aa10.71□□□□□ -0.69
USP11-211ENST00000489111 TAF6P49848 677 aa10.71□□□□□ -0.69
USP11-211ENST00000489111 SCNN1GP51170 649 aa10.71□□□□□ -0.69
USP11-211ENST00000489111 CCL23P55773 120 aa10.71□□□□□ -0.69
USP11-211ENST00000489111 GRIK3Q13003 919 aa10.71□□□□□ -0.69
USP11-211ENST00000489111 NAB2Q15742 525 aa10.71□□□□□ -0.69
USP11-211ENST00000489111 PLEKHG4Q58EX7 1191 aa10.71□□□□□ -0.69
USP11-211ENST00000489111 SCARA3Q6AZY7 606 aa10.71□□□□□ -0.69
USP11-211ENST00000489111 ALKBH5Q6P6C2 394 aaKnown RBP10.71□□□□□ -0.69
USP11-211ENST00000489111 NYAP1Q6ZVC0 841 aa10.71□□□□□ -0.69
USP11-211ENST00000489111 TMEM130Q8N3G9 435 aa10.71□□□□□ -0.69
USP11-211ENST00000489111 UBR7Q8N806 425 aa10.71□□□□□ -0.69
USP11-211ENST00000489111 DBF4BQ8NFT6 615 aa10.71□□□□□ -0.69
USP11-211ENST00000489111 URGCPQ8TCY9 931 aa10.71□□□□□ -0.69
USP11-211ENST00000489111 KAT6AQ92794 2004 aa10.71□□□□□ -0.69
USP11-211ENST00000489111 SYT11Q9BT88 431 aa10.71□□□□□ -0.69
USP11-211ENST00000489111 DNAI2Q9GZS0 605 aa10.71□□□□□ -0.69
USP11-211ENST00000489111 FAM124BQ9H5Z6 455 aaPredicted RBP10.71□□□□□ -0.69
USP11-211ENST00000489111 PRDM10Q9NQV6 1147 aa10.71□□□□□ -0.69
USP11-211ENST00000489111 NAGPAQ9UK23 515 aa10.71□□□□□ -0.69
USP11-211ENST00000489111 GUCA1BQ9UMX6 200 aa10.71□□□□□ -0.69
USP11-211ENST00000489111 CNTN6Q9UQ52 1028 aa10.71□□□□□ -0.69
USP11-211ENST00000489111 CEP350Q5VT06 3117 aa10.7□□□□□ -0.7
USP11-211ENST00000489111 ATP8B3O60423 1300 aa10.7□□□□□ -0.7
USP11-211ENST00000489111 C9IYK1 514 aa10.7□□□□□ -0.7
USP11-211ENST00000489111 PPEF2O14830 753 aa10.7□□□□□ -0.7
USP11-211ENST00000489111 THAP12O43422 761 aa10.7□□□□□ -0.7
USP11-211ENST00000489111 H2AFZP0C0S5 128 aa10.7□□□□□ -0.7
USP11-211ENST00000489111 CD19P15391 556 aa10.7□□□□□ -0.7
USP11-211ENST00000489111 LRPAP1P30533 357 aa10.7□□□□□ -0.7
USP11-211ENST00000489111 CYP2C18P33260 490 aa10.7□□□□□ -0.7
USP11-211ENST00000489111 ARHGAP25P42331 645 aa10.7□□□□□ -0.7
USP11-211ENST00000489111 ZNF132P52740 706 aa10.7□□□□□ -0.7
USP11-211ENST00000489111 GNG11P61952 73 aa10.7□□□□□ -0.7
USP11-211ENST00000489111 SOX4Q06945 474 aaPredicted RBP10.7□□□□□ -0.7
USP11-211ENST00000489111 LRRC26Q2I0M4 334 aa10.7□□□□□ -0.7
USP11-211ENST00000489111 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.7□□□□□ -0.7
USP11-211ENST00000489111 TRIM72Q6ZMU5 477 aa10.7□□□□□ -0.7
USP11-211ENST00000489111 ZNF662Q6ZS27 426 aa10.7□□□□□ -0.7
USP11-211ENST00000489111 H2AFVQ71UI9 128 aa10.7□□□□□ -0.7
USP11-211ENST00000489111 ZNF598Q86UK7 904 aaKnown RBP10.7□□□□□ -0.7
USP11-211ENST00000489111 LNX1Q8TBB1 728 aaPredicted RBP10.7□□□□□ -0.7
USP11-211ENST00000489111 LINC01599Q8WXQ3 324 aa10.7□□□□□ -0.7
USP11-211ENST00000489111 ZNF592Q92610 1267 aa10.7□□□□□ -0.7
USP11-211ENST00000489111 SCLYQ96I15 445 aa10.7□□□□□ -0.7
USP11-211ENST00000489111 MCOLN1Q9GZU1 580 aa10.7□□□□□ -0.7
USP11-211ENST00000489111 WNT8AQ9H1J5 351 aa10.7□□□□□ -0.7
USP11-211ENST00000489111 GOLGA2P5Q9HBQ8 144 aa10.7□□□□□ -0.7
USP11-211ENST00000489111 RNF216Q9NWF9 866 aaPredicted RBP10.7□□□□□ -0.7
USP11-211ENST00000489111 TBX21Q9UL17 535 aa10.7□□□□□ -0.7
USP11-211ENST00000489111 LRFN2Q9ULH4 789 aa10.7□□□□□ -0.7
USP11-211ENST00000489111 SNX9Q9Y5X1 595 aa10.7□□□□□ -0.7
USP11-211ENST00000489111 A0A0U1RQJ8 604 aa10.69□□□□□ -0.7
USP11-211ENST00000489111 MACROD2A1Z1Q3 448 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms