RNA–Protein interactions for RNA: ENST00000489028.1

RFC4-213, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-213ENST00000489028 PIN1Q13526 163 aaPredicted RBP4.81□□□□□ -1.64
RFC4-213ENST00000489028 ZNF267Q14586 743 aaPredicted RBP4.81□□□□□ -1.64
RFC4-213ENST00000489028 CCDC93Q567U6 631 aa4.81□□□□□ -1.64
RFC4-213ENST00000489028 FOXR2Q6PJQ5 311 aa4.81□□□□□ -1.64
RFC4-213ENST00000489028 HEATR3Q7Z4Q2 680 aa4.81□□□□□ -1.64
RFC4-213ENST00000489028 FAM43AQ8N2R8 423 aa4.81□□□□□ -1.64
RFC4-213ENST00000489028 SLC44A3Q8N4M1 653 aa4.81□□□□□ -1.64
RFC4-213ENST00000489028 C3orf20Q8ND61 904 aa4.81□□□□□ -1.64
RFC4-213ENST00000489028 SLC17A8Q8NDX2 589 aa4.81□□□□□ -1.64
RFC4-213ENST00000489028 MVB12AQ96EY5 273 aa4.81□□□□□ -1.64
RFC4-213ENST00000489028 Q96MF0 132 aa4.81□□□□□ -1.64
RFC4-213ENST00000489028 MED15Q96RN5 788 aa4.81□□□□□ -1.64
RFC4-213ENST00000489028 IMPG2Q9BZV3 1241 aa4.81□□□□□ -1.64
RFC4-213ENST00000489028 SLC12A5Q9H2X9 1139 aa4.81□□□□□ -1.64
RFC4-213ENST00000489028 TOR3AQ9H497 397 aa4.81□□□□□ -1.64
RFC4-213ENST00000489028 DTNBO60941 627 aa4.8□□□□□ -1.64
RFC4-213ENST00000489028 FTLP02792 175 aaPredicted RBP4.8□□□□□ -1.64
RFC4-213ENST00000489028 RPLP2P05387 115 aaKnown RBP4.8□□□□□ -1.64
RFC4-213ENST00000489028 HKR1P10072 659 aa4.8□□□□□ -1.64
RFC4-213ENST00000489028 FDXRP22570 491 aa4.8□□□□□ -1.64
RFC4-213ENST00000489028 ADRA1BP35368 520 aa4.8□□□□□ -1.64
RFC4-213ENST00000489028 MPLP40238 635 aa4.8□□□□□ -1.64
RFC4-213ENST00000489028 PHKA1P46020 1223 aa4.8□□□□□ -1.64
RFC4-213ENST00000489028 USP14P54578 494 aa4.8□□□□□ -1.64
RFC4-213ENST00000489028 TAP1Q03518 808 aa4.8□□□□□ -1.64
RFC4-213ENST00000489028 PGS1Q32NB8 556 aa4.8□□□□□ -1.64
RFC4-213ENST00000489028 CFAP52Q8N1V2 620 aa4.8□□□□□ -1.64
RFC4-213ENST00000489028 HPS3Q969F9 1004 aa4.8□□□□□ -1.64
RFC4-213ENST00000489028 COQ10AQ96MF6 247 aa4.8□□□□□ -1.64
RFC4-213ENST00000489028 NUP88Q99567 741 aaPredicted RBP4.8□□□□□ -1.64
RFC4-213ENST00000489028 SYNPO2LQ9H987 977 aa4.8□□□□□ -1.64
RFC4-213ENST00000489028 ALG13Q9NP73 1137 aaKnown RBP4.8□□□□□ -1.64
RFC4-213ENST00000489028 SIDT1Q9NXL6 827 aaKnown RBP4.8□□□□□ -1.64
RFC4-213ENST00000489028 ABCF2Q9UG63 623 aa4.8□□□□□ -1.64
RFC4-213ENST00000489028 TESQ9UGI8 421 aaKnown RBP4.8□□□□□ -1.64
RFC4-213ENST00000489028 AGAP1Q9UPQ3 857 aa4.8□□□□□ -1.64
RFC4-213ENST00000489028 ANKRD6Q9Y2G4 727 aa4.8□□□□□ -1.64
RFC4-213ENST00000489028 ZBTB32Q9Y2Y4 487 aaPredicted RBP4.8□□□□□ -1.64
RFC4-213ENST00000489028 SHROOM4Q9ULL8 1493 aa4.8□□□□□ -1.64
RFC4-213ENST00000489028 MAST3O60307 1309 aa4.79□□□□□ -1.64
RFC4-213ENST00000489028 A0A1W2PS29 197 aa4.79□□□□□ -1.64
RFC4-213ENST00000489028 MYADML2A6NDP7 307 aa4.79□□□□□ -1.64
RFC4-213ENST00000489028 SUN1O94901 812 aa4.79□□□□□ -1.64
RFC4-213ENST00000489028 MATN4O95460 622 aa4.79□□□□□ -1.64
RFC4-213ENST00000489028 ALDH2P05091 517 aa4.79□□□□□ -1.64
RFC4-213ENST00000489028 GJB1P08034 283 aa4.79□□□□□ -1.64
RFC4-213ENST00000489028 KCNA2P16389 499 aa4.79□□□□□ -1.64
RFC4-213ENST00000489028 NCLP19338 710 aaKnown RBP4.79□□□□□ -1.64
RFC4-213ENST00000489028 LPOP22079 712 aaPredicted RBP4.79□□□□□ -1.64
RFC4-213ENST00000489028 AKAP5P24588 427 aa4.79□□□□□ -1.64
RFC4-213ENST00000489028 SMARCA1P28370 1054 aa4.79□□□□□ -1.64
RFC4-213ENST00000489028 PSMC1P62191 440 aaKnown RBP4.79□□□□□ -1.64
RFC4-213ENST00000489028 PLEKHG6Q3KR16 790 aa4.79□□□□□ -1.64
RFC4-213ENST00000489028 ATAT1Q5SQI0 421 aa4.79□□□□□ -1.64
RFC4-213ENST00000489028 TMPRSS9Q7Z410 1059 aa4.79□□□□□ -1.64
RFC4-213ENST00000489028 PPP1R3BQ86XI6 285 aa4.79□□□□□ -1.64
RFC4-213ENST00000489028 SUPT20HQ8NEM7 779 aa4.79□□□□□ -1.64
RFC4-213ENST00000489028 SSH3Q8TE77 659 aa4.79□□□□□ -1.64
RFC4-213ENST00000489028 JPH3Q8WXH2 748 aaPredicted RBP4.79□□□□□ -1.64
RFC4-213ENST00000489028 TMEM125Q96AQ2 219 aa4.79□□□□□ -1.64
RFC4-213ENST00000489028 PRDM13Q9H4Q3 707 aa4.79□□□□□ -1.64
RFC4-213ENST00000489028 SLAMF7Q9NQ25 335 aa4.79□□□□□ -1.64
RFC4-213ENST00000489028 MAN1C1Q9NR34 630 aa4.79□□□□□ -1.64
RFC4-213ENST00000489028 LMBRD1Q9NUN5 540 aa4.79□□□□□ -1.64
RFC4-213ENST00000489028 C11orf21Q9P2W6 132 aa4.79□□□□□ -1.64
RFC4-213ENST00000489028 POLHQ9Y253 713 aa4.79□□□□□ -1.64
RFC4-213ENST00000489028 PRAMEF33A0A0G2JMD5 474 aa4.78□□□□□ -1.64
RFC4-213ENST00000489028 ZNF785A8K8V0 405 aa4.78□□□□□ -1.64
RFC4-213ENST00000489028 SLC16A6O15403 523 aa4.78□□□□□ -1.64
RFC4-213ENST00000489028 PRAMEF10O60809 474 aa4.78□□□□□ -1.64
RFC4-213ENST00000489028 ESRRBO95718 433 aa4.78□□□□□ -1.64
RFC4-213ENST00000489028 LMNAP02545 664 aaKnown RBP4.78□□□□□ -1.64
RFC4-213ENST00000489028 AHSGP02765 367 aa4.78□□□□□ -1.64
RFC4-213ENST00000489028 TYRP14679 529 aa4.78□□□□□ -1.64
RFC4-213ENST00000489028 CYP2C19P33261 490 aa4.78□□□□□ -1.64
RFC4-213ENST00000489028 PIK3CGP48736 1102 aa4.78□□□□□ -1.64
RFC4-213ENST00000489028 INHBEP58166 350 aa4.78□□□□□ -1.64
RFC4-213ENST00000489028 PURAQ00577 322 aaKnown RBP4.78□□□□□ -1.64
RFC4-213ENST00000489028 CD300EQ496F6 205 aaPredicted RBP4.78□□□□□ -1.64
RFC4-213ENST00000489028 TAPT1Q6NXT6 567 aa4.78□□□□□ -1.64
RFC4-213ENST00000489028 OLFML1Q6UWY5 402 aa4.78□□□□□ -1.64
RFC4-213ENST00000489028 TPH2Q8IWU9 490 aa4.78□□□□□ -1.64
RFC4-213ENST00000489028 GRAMD1CQ8IYS0 662 aa4.78□□□□□ -1.64
RFC4-213ENST00000489028 SH2D3CQ8N5H7 860 aa4.78□□□□□ -1.64
RFC4-213ENST00000489028 CELF5Q8N6W0 485 aaKnown RBP4.78□□□□□ -1.64
RFC4-213ENST00000489028 PLBD2Q8NHP8 589 aa4.78□□□□□ -1.64
RFC4-213ENST00000489028 FBXO41Q8TF61 875 aa4.78□□□□□ -1.64
RFC4-213ENST00000489028 CAVIN3Q969G5 261 aa4.78□□□□□ -1.64
RFC4-213ENST00000489028 PTCD3Q96EY7 689 aaKnown RBP4.78□□□□□ -1.64
RFC4-213ENST00000489028 CDH19Q9H159 772 aa4.78□□□□□ -1.64
RFC4-213ENST00000489028 MRPL46Q9H2W6 279 aaKnown RBP4.78□□□□□ -1.64
RFC4-213ENST00000489028 BRD9Q9H8M2 597 aa4.78□□□□□ -1.64
RFC4-213ENST00000489028 TBCCD1Q9NVR7 557 aa4.78□□□□□ -1.64
RFC4-213ENST00000489028 ETAA1Q9NY74 926 aa4.78□□□□□ -1.64
RFC4-213ENST00000489028 ZNF180Q9UJW8 692 aa4.78□□□□□ -1.64
RFC4-213ENST00000489028 NR2E3Q9Y5X4 410 aa4.78□□□□□ -1.64
RFC4-213ENST00000489028 TRGV11A0A075B6L2 103 aa4.77□□□□□ -1.65
RFC4-213ENST00000489028 CCDC195A0A1B0GUA6 201 aa4.77□□□□□ -1.65
RFC4-213ENST00000489028 MGST3O14880 152 aa4.77□□□□□ -1.65
RFC4-213ENST00000489028 RHOBTB3O94955 611 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms