RNA–Protein interactions for RNA: ENST00000488865.2

RNF220-216, Transcript of ring finger protein 220, humanhuman

TSL 2

Gene RNF220, Length 860 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-216ENST00000488865 K7ENM7 598 aa28.25■■■□□ 2.11
RNF220-216ENST00000488865 TRAK2O60296 914 aa28.25■■■□□ 2.11
RNF220-216ENST00000488865 FCARP24071 287 aa28.25■■■□□ 2.11
RNF220-216ENST00000488865 CCR2P41597 374 aa28.25■■■□□ 2.11
RNF220-216ENST00000488865 EPHA5P54756 1037 aa28.25■■■□□ 2.11
RNF220-216ENST00000488865 TWF1Q12792 350 aa28.25■■■□□ 2.11
RNF220-216ENST00000488865 FAM78AQ5JUQ0 283 aa28.25■■■□□ 2.11
RNF220-216ENST00000488865 CD302Q8IX05 232 aa28.25■■■□□ 2.11
RNF220-216ENST00000488865 RAD54LQ92698 747 aa28.25■■■□□ 2.11
RNF220-216ENST00000488865 ASB16Q96NS5 453 aa28.25■■■□□ 2.11
RNF220-216ENST00000488865 CEP72Q9P209 647 aa28.25■■■□□ 2.11
RNF220-216ENST00000488865 COL4A3Q01955 1670 aa28.25■■■□□ 2.11
RNF220-216ENST00000488865 FANCMQ8IYD8 2048 aa28.25■■■□□ 2.11
RNF220-216ENST00000488865 A0A0B4J269 797 aa28.24■■■□□ 2.11
RNF220-216ENST00000488865 KRT18P05783 430 aaKnown RBP28.24■■■□□ 2.11
RNF220-216ENST00000488865 PLCG1P19174 1290 aa28.24■■■□□ 2.11
RNF220-216ENST00000488865 MCM6Q14566 821 aa28.24■■■□□ 2.11
RNF220-216ENST00000488865 ZBTB41Q5SVQ8 909 aa28.24■■■□□ 2.11
RNF220-216ENST00000488865 TPRG1Q6ZUI0 275 aa28.24■■■□□ 2.11
RNF220-216ENST00000488865 USP37Q86T82 979 aa28.24■■■□□ 2.11
RNF220-216ENST00000488865 MAML2Q8IZL2 1156 aaPredicted RBP28.24■■■□□ 2.11
RNF220-216ENST00000488865 TMEM130Q8N3G9 435 aa28.24■■■□□ 2.11
RNF220-216ENST00000488865 FBXO4Q9UKT5 387 aa28.24■■■□□ 2.11
RNF220-216ENST00000488865 TIMM13Q9Y5L4 95 aaPredicted RBP28.24■■■□□ 2.11
RNF220-216ENST00000488865 OR6C75A6NL08 312 aa28.23■■■□□ 2.11
RNF220-216ENST00000488865 PAX3P23760 479 aa28.23■■■□□ 2.11
RNF220-216ENST00000488865 GTF2BQ00403 316 aa28.23■■■□□ 2.11
RNF220-216ENST00000488865 KARSQ15046 597 aaKnown RBP28.23■■■□□ 2.11
RNF220-216ENST00000488865 ZNF528Q3MIS6 628 aa28.23■■■□□ 2.11
RNF220-216ENST00000488865 SPATA1Q5VX52 437 aa28.23■■■□□ 2.11
RNF220-216ENST00000488865 DSTYKQ6XUX3 929 aa28.23■■■□□ 2.11
RNF220-216ENST00000488865 HS6ST3Q8IZP7 471 aa28.23■■■□□ 2.11
RNF220-216ENST00000488865 RASSF8Q8NHQ8 419 aa28.23■■■□□ 2.11
RNF220-216ENST00000488865 CLDN23Q96B33 292 aa28.23■■■□□ 2.11
RNF220-216ENST00000488865 BORCS6Q96GS4 357 aa28.23■■■□□ 2.11
RNF220-216ENST00000488865 MSTO1Q9BUK6 570 aa28.23■■■□□ 2.11
RNF220-216ENST00000488865 ASAH2Q9NR71 780 aa28.23■■■□□ 2.11
RNF220-216ENST00000488865 SPATA6Q9NWH7 488 aaPredicted RBP28.23■■■□□ 2.11
RNF220-216ENST00000488865 MRPS17Q9Y2R5 130 aaKnown RBP28.23■■■□□ 2.11
RNF220-216ENST00000488865 ZNF292O60281 2723 aa28.22■■■□□ 2.11
RNF220-216ENST00000488865 NCAM2O15394 837 aa28.22■■■□□ 2.11
RNF220-216ENST00000488865 MOSPD3O75425 235 aa28.22■■■□□ 2.11
RNF220-216ENST00000488865 TYMPP19971 482 aa28.22■■■□□ 2.11
RNF220-216ENST00000488865 CD72P21854 359 aa28.22■■■□□ 2.11
RNF220-216ENST00000488865 GRIN1Q05586 938 aa28.22■■■□□ 2.11
RNF220-216ENST00000488865 PLD1Q13393 1074 aa28.22■■■□□ 2.11
RNF220-216ENST00000488865 SF3A1Q15459 793 aaKnown RBP28.22■■■□□ 2.11
RNF220-216ENST00000488865 ZNF852Q6ZMS4 543 aa28.22■■■□□ 2.11
RNF220-216ENST00000488865 LARP4BQ92615 738 aaKnown RBP28.22■■■□□ 2.11
RNF220-216ENST00000488865 SMARCD2Q92925 531 aa28.22■■■□□ 2.11
RNF220-216ENST00000488865 FIZ1Q96SL8 496 aa28.22■■■□□ 2.11
RNF220-216ENST00000488865 TRMT61BQ9BVS5 477 aaKnown RBP28.22■■■□□ 2.11
RNF220-216ENST00000488865 CPSF3Q9UKF6 684 aaKnown RBP28.22■■■□□ 2.11
RNF220-216ENST00000488865 FRYLO94915 3013 aa28.21■■■□□ 2.11
RNF220-216ENST00000488865 LAMTOR5O43504 91 aa28.21■■■□□ 2.11
RNF220-216ENST00000488865 TBCAO75347 108 aaKnown RBP28.21■■■□□ 2.11
RNF220-216ENST00000488865 MYL4P12829 197 aa28.21■■■□□ 2.11
RNF220-216ENST00000488865 TARSP26639 723 aaKnown RBP28.21■■■□□ 2.11
RNF220-216ENST00000488865 GUCY2FP51841 1108 aa28.21■■■□□ 2.11
RNF220-216ENST00000488865 FOXK2Q01167 660 aa28.21■■■□□ 2.11
RNF220-216ENST00000488865 GPR17Q13304 367 aa28.21■■■□□ 2.11
RNF220-216ENST00000488865 MYBPC2Q14324 1141 aa28.21■■■□□ 2.11
RNF220-216ENST00000488865 SLC39A4Q6P5W5 647 aa28.21■■■□□ 2.11
RNF220-216ENST00000488865 MAP4K3Q8IVH8 894 aa28.21■■■□□ 2.11
RNF220-216ENST00000488865 ZSWIM3Q96MP5 696 aa28.21■■■□□ 2.11
RNF220-216ENST00000488865 CCSER1Q9C0I3 900 aa28.21■■■□□ 2.11
RNF220-216ENST00000488865 GPR88Q9GZN0 384 aa28.21■■■□□ 2.11
RNF220-216ENST00000488865 BRD9Q9H8M2 597 aa28.21■■■□□ 2.11
RNF220-216ENST00000488865 TRPV4Q9HBA0 871 aa28.21■■■□□ 2.11
RNF220-216ENST00000488865 TRPV5Q9NQA5 729 aa28.21■■■□□ 2.11
RNF220-216ENST00000488865 HEBP1Q9NRV9 189 aa28.21■■■□□ 2.11
RNF220-216ENST00000488865 DERAQ9Y315 318 aa28.21■■■□□ 2.11
RNF220-216ENST00000488865 YIPF1Q9Y548 306 aa28.21■■■□□ 2.11
RNF220-216ENST00000488865 PATJQ8NI35 1801 aa28.2■■■□□ 2.11
RNF220-216ENST00000488865 NRG2O14511 850 aaPredicted RBP28.2■■■□□ 2.1
RNF220-216ENST00000488865 VNN2O95498 520 aa28.2■■■□□ 2.1
RNF220-216ENST00000488865 DDIT3P35638 169 aa28.2■■■□□ 2.1
RNF220-216ENST00000488865 RPS9P46781 194 aaKnown RBP28.2■■■□□ 2.1
RNF220-216ENST00000488865 LILRA4P59901 499 aa28.2■■■□□ 2.1
RNF220-216ENST00000488865 GRM2Q14416 872 aa28.2■■■□□ 2.1
RNF220-216ENST00000488865 JADE1Q6IE81 842 aa28.2■■■□□ 2.1
RNF220-216ENST00000488865 IRF7Q92985 503 aa28.2■■■□□ 2.1
RNF220-216ENST00000488865 ST6GALNAC4Q9H4F1 302 aa28.2■■■□□ 2.1
RNF220-216ENST00000488865 ZHX3Q9H4I2 956 aa28.2■■■□□ 2.1
RNF220-216ENST00000488865 DCHS1Q96JQ0 3298 aa28.2■■■□□ 2.1
RNF220-216ENST00000488865 EP300Q09472 2414 aaPredicted RBP28.2■■■□□ 2.1
RNF220-216ENST00000488865 OR4Q2P0C623 313 aa28.19■■■□□ 2.1
RNF220-216ENST00000488865 PSMC3P17980 439 aa28.19■■■□□ 2.1
RNF220-216ENST00000488865 OVOS1Q6IE37 1185 aa28.19■■■□□ 2.1
RNF220-216ENST00000488865 DEPDC1BQ8WUY9 529 aa28.19■■■□□ 2.1
RNF220-216ENST00000488865 FAM212AQ96EL1 285 aa28.19■■■□□ 2.1
RNF220-216ENST00000488865 PGLYRP2Q96PD5 576 aa28.19■■■□□ 2.1
RNF220-216ENST00000488865 SHISA7A6NL88 538 aa28.18■■■□□ 2.1
RNF220-216ENST00000488865 MAN2B1O00754 1011 aa28.18■■■□□ 2.1
RNF220-216ENST00000488865 PPEF2O14830 753 aa28.18■■■□□ 2.1
RNF220-216ENST00000488865 NMT1P30419 496 aaKnown RBP28.18■■■□□ 2.1
RNF220-216ENST00000488865 DUSP4Q13115 394 aa28.18■■■□□ 2.1
RNF220-216ENST00000488865 SLFN12LQ6IEE8 588 aa28.18■■■□□ 2.1
RNF220-216ENST00000488865 VITQ6UXI7 678 aa28.18■■■□□ 2.1
RNF220-216ENST00000488865 KRI1Q8N9T8 703 aaKnown RBP28.18■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms