RNA–Protein interactions for RNA: ENST00000488864.5

CHD1L-208, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 2

Gene CHD1L, Length 2,415 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-208ENST00000488864 TMEM59LQ9UK28 342 aa14.23□□□□□ -0.13
CHD1L-208ENST00000488864 PCDHGC5Q9Y5F6 944 aa14.23□□□□□ -0.13
CHD1L-208ENST00000488864 CLDN3O15551 220 aa14.22□□□□□ -0.13
CHD1L-208ENST00000488864 PSMC2P35998 433 aaKnown RBP14.22□□□□□ -0.13
CHD1L-208ENST00000488864 FLT3P36888 993 aa14.22□□□□□ -0.13
CHD1L-208ENST00000488864 ACOT2P49753 483 aa14.22□□□□□ -0.13
CHD1L-208ENST00000488864 POU5F1BQ06416 359 aa14.22□□□□□ -0.13
CHD1L-208ENST00000488864 SNX17Q15036 470 aa14.22□□□□□ -0.13
CHD1L-208ENST00000488864 AMHR2Q16671 573 aa14.22□□□□□ -0.13
CHD1L-208ENST00000488864 ZBTB41Q5SVQ8 909 aa14.22□□□□□ -0.13
CHD1L-208ENST00000488864 EEF1DP3Q658K8 133 aa14.22□□□□□ -0.13
CHD1L-208ENST00000488864 DNAAF5Q86Y56 855 aa14.22□□□□□ -0.13
CHD1L-208ENST00000488864 FAM213AQ9BRX8 229 aa14.22□□□□□ -0.13
CHD1L-208ENST00000488864 EDEM3Q9BZQ6 932 aa14.22□□□□□ -0.13
CHD1L-208ENST00000488864 ISCUQ9H1K1 167 aa14.22□□□□□ -0.13
CHD1L-208ENST00000488864 LRRC4CQ9HCJ2 640 aa14.22□□□□□ -0.13
CHD1L-208ENST00000488864 CEP72Q9P209 647 aa14.22□□□□□ -0.13
CHD1L-208ENST00000488864 ARMCX3Q9UH62 379 aaPredicted RBP14.22□□□□□ -0.13
CHD1L-208ENST00000488864 SLC12A6Q9UHW9 1150 aa14.22□□□□□ -0.13
CHD1L-208ENST00000488864 CDY2AQ9Y6F7 541 aa14.22□□□□□ -0.13
CHD1L-208ENST00000488864 ARVCFO00192 962 aa14.22□□□□□ -0.13
CHD1L-208ENST00000488864 MYZAPP0CAP1 466 aa14.22□□□□□ -0.13
CHD1L-208ENST00000488864 DARSP14868 501 aaKnown RBP14.22□□□□□ -0.13
CHD1L-208ENST00000488864 ARF4P18085 180 aaPredicted RBP14.22□□□□□ -0.13
CHD1L-208ENST00000488864 EIF4BP23588 611 aaKnown RBP14.22□□□□□ -0.13
CHD1L-208ENST00000488864 ABCD1P33897 745 aa14.22□□□□□ -0.13
CHD1L-208ENST00000488864 PSEN1P49768 467 aa14.22□□□□□ -0.13
CHD1L-208ENST00000488864 BYSLQ13895 437 aaKnown RBP14.22□□□□□ -0.13
CHD1L-208ENST00000488864 PREPLQ4J6C6 727 aaPredicted RBP14.22□□□□□ -0.13
CHD1L-208ENST00000488864 ATF7IP2Q5U623 682 aa14.22□□□□□ -0.13
CHD1L-208ENST00000488864 LRIG3Q6UXM1 1119 aa14.22□□□□□ -0.13
CHD1L-208ENST00000488864 DHX38Q92620 1227 aaKnown RBP14.22□□□□□ -0.13
CHD1L-208ENST00000488864 CCDC114Q96M63 670 aa14.22□□□□□ -0.13
CHD1L-208ENST00000488864 MSTO1Q9BUK6 570 aa14.22□□□□□ -0.13
CHD1L-208ENST00000488864 PRMT7Q9NVM4 692 aaPredicted RBP14.22□□□□□ -0.13
CHD1L-208ENST00000488864 BCCIPQ9P287 314 aaKnown RBP eCLIP14.22□□□□□ -0.13
CHD1L-208ENST00000488864 MCM8Q9UJA3 840 aa14.22□□□□□ -0.13
CHD1L-208ENST00000488864 KCNK3O14649 394 aa14.21□□□□□ -0.13
CHD1L-208ENST00000488864 TRAPPC3O43617 180 aa14.21□□□□□ -0.13
CHD1L-208ENST00000488864 PIGRP01833 764 aa14.21□□□□□ -0.13
CHD1L-208ENST00000488864 CHRNA1P02708 482 aa14.21□□□□□ -0.13
CHD1L-208ENST00000488864 ADRB2P07550 413 aa14.21□□□□□ -0.13
CHD1L-208ENST00000488864 MNX1P50219 401 aaPredicted RBP14.21□□□□□ -0.13
CHD1L-208ENST00000488864 OSTNP61366 133 aa14.21□□□□□ -0.13
CHD1L-208ENST00000488864 TNNC1P63316 161 aa14.21□□□□□ -0.13
CHD1L-208ENST00000488864 MRPS6P82932 125 aaKnown RBP14.21□□□□□ -0.13
CHD1L-208ENST00000488864 SNRNP35Q16560 246 aaKnown RBP14.21□□□□□ -0.13
CHD1L-208ENST00000488864 SLC18A3Q16572 532 aa14.21□□□□□ -0.13
CHD1L-208ENST00000488864 NFIL3Q16649 462 aa14.21□□□□□ -0.13
CHD1L-208ENST00000488864 CCDC121Q6ZUS5 278 aa14.21□□□□□ -0.13
CHD1L-208ENST00000488864 CATSPER4Q7RTX7 472 aa14.21□□□□□ -0.13
CHD1L-208ENST00000488864 RSPH3Q86UC2 560 aa14.21□□□□□ -0.13
CHD1L-208ENST00000488864 FAM228AQ86W67 206 aa14.21□□□□□ -0.13
CHD1L-208ENST00000488864 IFNLR1Q8IU57 520 aaPredicted RBP14.21□□□□□ -0.13
CHD1L-208ENST00000488864 SLC9A9Q8IVB4 645 aa14.21□□□□□ -0.13
CHD1L-208ENST00000488864 AP1M1Q9BXS5 423 aa14.21□□□□□ -0.13
CHD1L-208ENST00000488864 CELF4Q9BZC1 486 aaKnown RBP14.21□□□□□ -0.13
CHD1L-208ENST00000488864 ADAMTS1Q9UHI8 967 aa14.21□□□□□ -0.13
CHD1L-208ENST00000488864 AGO2Q9UKV8 859 aaKnown RBP14.21□□□□□ -0.13
CHD1L-208ENST00000488864 GOLGA6L10A6NI86 522 aa14.21□□□□□ -0.14
CHD1L-208ENST00000488864 SRRM3A6NNA2 597 aaPredicted RBP14.21□□□□□ -0.14
CHD1L-208ENST00000488864 DCDC2CA8MYV0 355 aa14.21□□□□□ -0.14
CHD1L-208ENST00000488864 M0QZ92 97 aa14.21□□□□□ -0.14
CHD1L-208ENST00000488864 TSPAN1O60635 241 aa14.21□□□□□ -0.14
CHD1L-208ENST00000488864 TOM1L1O75674 476 aa14.21□□□□□ -0.14
CHD1L-208ENST00000488864 GNA14O95837 355 aa14.21□□□□□ -0.14
CHD1L-208ENST00000488864 TRIM49P0CI25 452 aa14.21□□□□□ -0.14
CHD1L-208ENST00000488864 TRIM49CP0CI26 452 aa14.21□□□□□ -0.14
CHD1L-208ENST00000488864 RDXP35241 583 aaKnown RBP14.21□□□□□ -0.14
CHD1L-208ENST00000488864 RAPGEF1Q13905 1077 aa14.21□□□□□ -0.14
CHD1L-208ENST00000488864 ZNF568Q3ZCX4 644 aa14.21□□□□□ -0.14
CHD1L-208ENST00000488864 ZPBP2Q6X784 338 aa14.21□□□□□ -0.14
CHD1L-208ENST00000488864 TRIM59Q8IWR1 403 aa14.21□□□□□ -0.14
CHD1L-208ENST00000488864 C12orf56Q8IXR9 622 aa14.21□□□□□ -0.14
CHD1L-208ENST00000488864 NME8Q8N427 588 aa14.21□□□□□ -0.14
CHD1L-208ENST00000488864 CEP120Q8N960 986 aa14.21□□□□□ -0.14
CHD1L-208ENST00000488864 KCNN1Q92952 543 aa14.21□□□□□ -0.14
CHD1L-208ENST00000488864 FAM84AQ96KN4 292 aa14.21□□□□□ -0.14
CHD1L-208ENST00000488864 CRISPLD2Q9H0B8 497 aa14.21□□□□□ -0.14
CHD1L-208ENST00000488864 HAUS2Q9NVX0 235 aa14.21□□□□□ -0.14
CHD1L-208ENST00000488864 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.21□□□□□ -0.14
CHD1L-208ENST00000488864 A0A0B4J269 797 aa14.2□□□□□ -0.14
CHD1L-208ENST00000488864 PQBP1O60828 265 aaKnown RBP14.2□□□□□ -0.14
CHD1L-208ENST00000488864 GARTP22102 1010 aa14.2□□□□□ -0.14
CHD1L-208ENST00000488864 SCP2P22307 547 aa14.2□□□□□ -0.14
CHD1L-208ENST00000488864 CTNNA1P35221 906 aaKnown RBP14.2□□□□□ -0.14
CHD1L-208ENST00000488864 DLG4P78352 724 aa14.2□□□□□ -0.14
CHD1L-208ENST00000488864 THNSL1Q8IYQ7 743 aa14.2□□□□□ -0.14
CHD1L-208ENST00000488864 SLC43A3Q8NBI5 491 aa14.2□□□□□ -0.14
CHD1L-208ENST00000488864 SYN2Q92777 582 aaPredicted RBP14.2□□□□□ -0.14
CHD1L-208ENST00000488864 CCDC127Q96BQ5 260 aa14.2□□□□□ -0.14
CHD1L-208ENST00000488864 BORCS6Q96GS4 357 aa14.2□□□□□ -0.14
CHD1L-208ENST00000488864 SEC16BQ96JE7 1060 aa14.2□□□□□ -0.14
CHD1L-208ENST00000488864 DONSONQ9NYP3 566 aa14.2□□□□□ -0.14
CHD1L-208ENST00000488864 SUFUQ9UMX1 484 aa14.2□□□□□ -0.14
CHD1L-208ENST00000488864 LAMA2P24043 3122 aaKnown RBP14.2□□□□□ -0.14
CHD1L-208ENST00000488864 SLC16A3O15427 465 aaKnown RBP14.2□□□□□ -0.14
CHD1L-208ENST00000488864 CHRM1P11229 460 aaPredicted RBP14.2□□□□□ -0.14
CHD1L-208ENST00000488864 TNFSF9P41273 254 aa14.2□□□□□ -0.14
CHD1L-208ENST00000488864 CRYBB1P53674 252 aaPredicted RBP14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms