RNA–Protein interactions for RNA: ENST00000488834.5

SSR1-209, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 4

Gene SSR1, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-209ENST00000488834 CGRRF1Q99675 332 aa5.09□□□□□ -1.59
SSR1-209ENST00000488834 C1orf43Q9BWL3 253 aa5.09□□□□□ -1.59
SSR1-209ENST00000488834 SCAND2PQ9GZW5 306 aaPredicted RBP5.09□□□□□ -1.59
SSR1-209ENST00000488834 SLC12A5Q9H2X9 1139 aa5.09□□□□□ -1.59
SSR1-209ENST00000488834 ARMT1Q9H993 441 aa5.09□□□□□ -1.59
SSR1-209ENST00000488834 GALNT9Q9HCQ5 603 aa5.09□□□□□ -1.59
SSR1-209ENST00000488834 SARS2Q9NP81 518 aaKnown RBP5.09□□□□□ -1.59
SSR1-209ENST00000488834 SLC45A2Q9UMX9 530 aa5.09□□□□□ -1.59
SSR1-209ENST00000488834 PCDHA1Q9Y5I3 950 aa5.09□□□□□ -1.59
SSR1-209ENST00000488834 GOLGA6CA6NDK9 693 aa5.08□□□□□ -1.6
SSR1-209ENST00000488834 GOLGA6BA6NDN3 693 aa5.08□□□□□ -1.6
SSR1-209ENST00000488834 TMEM191CA6NGB0 347 aa5.08□□□□□ -1.6
SSR1-209ENST00000488834 TMEM200CA6NKL6 621 aa5.08□□□□□ -1.6
SSR1-209ENST00000488834 NT5C1B-RDH14C9J2C7 533 aa5.08□□□□□ -1.6
SSR1-209ENST00000488834 CTNND1O60716 968 aaKnown RBP5.08□□□□□ -1.6
SSR1-209ENST00000488834 GOLGA6DP0CG33 693 aa5.08□□□□□ -1.6
SSR1-209ENST00000488834 ITGAMP11215 1152 aa5.08□□□□□ -1.6
SSR1-209ENST00000488834 TYRP14679 529 aa5.08□□□□□ -1.6
SSR1-209ENST00000488834 KCNJ5P48544 419 aa5.08□□□□□ -1.6
SSR1-209ENST00000488834 SLFN5Q08AF3 891 aa5.08□□□□□ -1.6
SSR1-209ENST00000488834 FAM102BQ5T8I3 360 aa5.08□□□□□ -1.6
SSR1-209ENST00000488834 PPP4R4Q6NUP7 873 aa5.08□□□□□ -1.6
SSR1-209ENST00000488834 PDSS2Q86YH6 399 aa5.08□□□□□ -1.6
SSR1-209ENST00000488834 COLGALT2Q8IYK4 626 aa5.08□□□□□ -1.6
SSR1-209ENST00000488834 TMIEQ8NEW7 156 aa5.08□□□□□ -1.6
SSR1-209ENST00000488834 KLHDC4Q8TBB5 520 aa5.08□□□□□ -1.6
SSR1-209ENST00000488834 SLC35G2Q8TBE7 412 aa5.08□□□□□ -1.6
SSR1-209ENST00000488834 KLHL32Q96NJ5 620 aa5.08□□□□□ -1.6
SSR1-209ENST00000488834 SMOQ99835 787 aa5.08□□□□□ -1.6
SSR1-209ENST00000488834 TLR10Q9BXR5 811 aa5.08□□□□□ -1.6
SSR1-209ENST00000488834 SIK2Q9H0K1 926 aa5.08□□□□□ -1.6
SSR1-209ENST00000488834 GOLGA6AQ9NYA3 693 aa5.08□□□□□ -1.6
SSR1-209ENST00000488834 KLHL42Q9P2K6 505 aa5.08□□□□□ -1.6
SSR1-209ENST00000488834 TOR1BO14657 336 aa5.07□□□□□ -1.6
SSR1-209ENST00000488834 TSPAN6O43657 245 aa5.07□□□□□ -1.6
SSR1-209ENST00000488834 B3GALT2O43825 422 aa5.07□□□□□ -1.6
SSR1-209ENST00000488834 SPDEFO95238 335 aa5.07□□□□□ -1.6
SSR1-209ENST00000488834 ELANEP08246 267 aa5.07□□□□□ -1.6
SSR1-209ENST00000488834 MYBP10242 640 aa5.07□□□□□ -1.6
SSR1-209ENST00000488834 RARBP10826 455 aa5.07□□□□□ -1.6
SSR1-209ENST00000488834 LPOP22079 712 aaPredicted RBP5.07□□□□□ -1.6
SSR1-209ENST00000488834 ZFP36P26651 326 aaKnown RBP5.07□□□□□ -1.6
SSR1-209ENST00000488834 HTR1BP28222 390 aa5.07□□□□□ -1.6
SSR1-209ENST00000488834 ACVRL1P37023 503 aa5.07□□□□□ -1.6
SSR1-209ENST00000488834 ZNF135P52742 658 aaPredicted RBP5.07□□□□□ -1.6
SSR1-209ENST00000488834 USP14P54578 494 aa5.07□□□□□ -1.6
SSR1-209ENST00000488834 FSTL1Q12841 308 aa5.07□□□□□ -1.6
SSR1-209ENST00000488834 KLF10Q13118 480 aa5.07□□□□□ -1.6
SSR1-209ENST00000488834 TP53BP2Q13625 1128 aa5.07□□□□□ -1.6
SSR1-209ENST00000488834 MLC1Q15049 377 aa5.07□□□□□ -1.6
SSR1-209ENST00000488834 ARHGAP29Q52LW3 1261 aa5.07□□□□□ -1.6
SSR1-209ENST00000488834 B3GNTL1Q67FW5 361 aaPredicted RBP5.07□□□□□ -1.6
SSR1-209ENST00000488834 RHOUQ7L0Q8 258 aa5.07□□□□□ -1.6
SSR1-209ENST00000488834 EPM2AIP1Q7L775 607 aaPredicted RBP5.07□□□□□ -1.6
SSR1-209ENST00000488834 CLNKQ7Z7G1 428 aa5.07□□□□□ -1.6
SSR1-209ENST00000488834 ARHGEF19Q8IW93 802 aa5.07□□□□□ -1.6
SSR1-209ENST00000488834 WDR75Q8IWA0 830 aaKnown RBP5.07□□□□□ -1.6
SSR1-209ENST00000488834 MYO1HQ8N1T3 1032 aa5.07□□□□□ -1.6
SSR1-209ENST00000488834 PCSK9Q8NBP7 692 aaKnown RBP5.07□□□□□ -1.6
SSR1-209ENST00000488834 PDPRQ8NCN5 879 aa5.07□□□□□ -1.6
SSR1-209ENST00000488834 SUPT20HQ8NEM7 779 aa5.07□□□□□ -1.6
SSR1-209ENST00000488834 LARP4BQ92615 738 aaKnown RBP5.07□□□□□ -1.6
SSR1-209ENST00000488834 SCAMP4Q969E2 229 aa5.07□□□□□ -1.6
SSR1-209ENST00000488834 CAVIN3Q969G5 261 aa5.07□□□□□ -1.6
SSR1-209ENST00000488834 TAAR9Q96RI9 348 aa5.07□□□□□ -1.6
SSR1-209ENST00000488834 ACO2Q99798 780 aaKnown RBP5.07□□□□□ -1.6
SSR1-209ENST00000488834 WDR11Q9BZH6 1224 aa5.07□□□□□ -1.6
SSR1-209ENST00000488834 ANLNQ9NQW6 1124 aa5.07□□□□□ -1.6
SSR1-209ENST00000488834 TBCCD1Q9NVR7 557 aa5.07□□□□□ -1.6
SSR1-209ENST00000488834 RLIMQ9NVW2 624 aa5.07□□□□□ -1.6
SSR1-209ENST00000488834 HSFX1Q9UBD0 423 aa5.07□□□□□ -1.6
SSR1-209ENST00000488834 CPA4Q9UI42 421 aa5.07□□□□□ -1.6
SSR1-209ENST00000488834 ZDHHC8Q9ULC8 765 aa5.07□□□□□ -1.6
SSR1-209ENST00000488834 TRGV11A0A075B6L2 103 aa5.06□□□□□ -1.6
SSR1-209ENST00000488834 CCDC195A0A1B0GUA6 201 aa5.06□□□□□ -1.6
SSR1-209ENST00000488834 MARCH11A6NNE9 402 aa5.06□□□□□ -1.6
SSR1-209ENST00000488834 H3BML4 177 aa5.06□□□□□ -1.6
SSR1-209ENST00000488834 POLRMTO00411 1230 aaKnown RBP5.06□□□□□ -1.6
SSR1-209ENST00000488834 AKAP8O43823 692 aaKnown RBP5.06□□□□□ -1.6
SSR1-209ENST00000488834 MARCH6O60337 910 aa5.06□□□□□ -1.6
SSR1-209ENST00000488834 CHEK2O96017 543 aa5.06□□□□□ -1.6
SSR1-209ENST00000488834 AHSGP02765 367 aa5.06□□□□□ -1.6
SSR1-209ENST00000488834 AVPR1BP47901 424 aa5.06□□□□□ -1.6
SSR1-209ENST00000488834 FPGSQ05932 587 aa5.06□□□□□ -1.6
SSR1-209ENST00000488834 PLS1Q14651 629 aa5.06□□□□□ -1.6
SSR1-209ENST00000488834 KHDC1LQ5JSQ8 128 aa5.06□□□□□ -1.6
SSR1-209ENST00000488834 FAM90A1Q86YD7 464 aa5.06□□□□□ -1.6
SSR1-209ENST00000488834 VRK3Q8IV63 474 aa5.06□□□□□ -1.6
SSR1-209ENST00000488834 CFAP52Q8N1V2 620 aa5.06□□□□□ -1.6
SSR1-209ENST00000488834 ZBTB34Q8NCN2 500 aa5.06□□□□□ -1.6
SSR1-209ENST00000488834 NSUN7Q8NE18 718 aaKnown RBP5.06□□□□□ -1.6
SSR1-209ENST00000488834 TMEM125Q96AQ2 219 aa5.06□□□□□ -1.6
SSR1-209ENST00000488834 PTCD3Q96EY7 689 aaKnown RBP5.06□□□□□ -1.6
SSR1-209ENST00000488834 BOD1Q96IK1 185 aa5.06□□□□□ -1.6
SSR1-209ENST00000488834 PUS7Q96PZ0 661 aaKnown RBP5.06□□□□□ -1.6
SSR1-209ENST00000488834 PRRX2Q99811 253 aa5.06□□□□□ -1.6
SSR1-209ENST00000488834 TTPALQ9BTX7 342 aa5.06□□□□□ -1.6
SSR1-209ENST00000488834 CNPPD1Q9BV87 410 aa5.06□□□□□ -1.6
SSR1-209ENST00000488834 MRPL46Q9H2W6 279 aaKnown RBP5.06□□□□□ -1.6
SSR1-209ENST00000488834 SERHL2Q9H4I8 314 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms