RNA–Protein interactions for RNA: ENST00000488317.1

SRRM1-215, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 2

Gene SRRM1, Length 333 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-215ENST00000488317 LMF1Q96S06 567 aa5.69□□□□□ -1.5
SRRM1-215ENST00000488317 CPPED1Q9BRF8 314 aaPredicted RBP5.69□□□□□ -1.5
SRRM1-215ENST00000488317 COLEC11Q9BWP8 271 aa5.69□□□□□ -1.5
SRRM1-215ENST00000488317 STK31Q9BXU1 1019 aa5.69□□□□□ -1.5
SRRM1-215ENST00000488317 ZNF518BQ9C0D4 1074 aa5.69□□□□□ -1.5
SRRM1-215ENST00000488317 AGO3Q9H9G7 860 aaKnown RBP5.69□□□□□ -1.5
SRRM1-215ENST00000488317 RLIMQ9NVW2 624 aa5.69□□□□□ -1.5
SRRM1-215ENST00000488317 ITGB1BP2Q9UKP3 347 aa5.69□□□□□ -1.5
SRRM1-215ENST00000488317 OAZ3Q9UMX2 235 aa5.69□□□□□ -1.5
SRRM1-215ENST00000488317 SLC45A2Q9UMX9 530 aa5.69□□□□□ -1.5
SRRM1-215ENST00000488317 A0A087WV62 115 aa5.68□□□□□ -1.5
SRRM1-215ENST00000488317 TRIM43BA6NCK2 446 aa5.68□□□□□ -1.5
SRRM1-215ENST00000488317 PRSS29PA6NIE9 313 aa5.68□□□□□ -1.5
SRRM1-215ENST00000488317 PRR5-ARHGAP8B1AHC4 643 aa5.68□□□□□ -1.5
SRRM1-215ENST00000488317 ADAMTS3O15072 1205 aa5.68□□□□□ -1.5
SRRM1-215ENST00000488317 THAP12O43422 761 aa5.68□□□□□ -1.5
SRRM1-215ENST00000488317 PIP5K1CO60331 668 aa5.68□□□□□ -1.5
SRRM1-215ENST00000488317 B4GALT3O60512 393 aa5.68□□□□□ -1.5
SRRM1-215ENST00000488317 AGFG2O95081 481 aa5.68□□□□□ -1.5
SRRM1-215ENST00000488317 UNC5CO95185 931 aa5.68□□□□□ -1.5
SRRM1-215ENST00000488317 CNOT4O95628 575 aaKnown RBP5.68□□□□□ -1.5
SRRM1-215ENST00000488317 TSPAN15O95858 294 aa5.68□□□□□ -1.5
SRRM1-215ENST00000488317 ABHD16AO95870 558 aa5.68□□□□□ -1.5
SRRM1-215ENST00000488317 GRPP07492 148 aa5.68□□□□□ -1.5
SRRM1-215ENST00000488317 GNAT2P19087 354 aa5.68□□□□□ -1.5
SRRM1-215ENST00000488317 PAX3P23760 479 aa5.68□□□□□ -1.5
SRRM1-215ENST00000488317 SLC6A4P31645 630 aa5.68□□□□□ -1.5
SRRM1-215ENST00000488317 ZNF135P52742 658 aaPredicted RBP5.68□□□□□ -1.5
SRRM1-215ENST00000488317 BMT2Q1RMZ1 405 aa5.68□□□□□ -1.5
SRRM1-215ENST00000488317 AMOTQ4VCS5 1084 aa5.68□□□□□ -1.5
SRRM1-215ENST00000488317 FKBP15Q5T1M5 1219 aa5.68□□□□□ -1.5
SRRM1-215ENST00000488317 NT5DC1Q5TFE4 455 aa5.68□□□□□ -1.5
SRRM1-215ENST00000488317 EFCAB12Q6NXP0 572 aa5.68□□□□□ -1.5
SRRM1-215ENST00000488317 PDSS2Q86YH6 399 aa5.68□□□□□ -1.5
SRRM1-215ENST00000488317 SMAP1Q8IYB5 467 aaPredicted RBP5.68□□□□□ -1.5
SRRM1-215ENST00000488317 GPR135Q8IZ08 494 aa5.68□□□□□ -1.5
SRRM1-215ENST00000488317 CPXCR1Q8N123 301 aa5.68□□□□□ -1.5
SRRM1-215ENST00000488317 LGI4Q8N135 537 aa5.68□□□□□ -1.5
SRRM1-215ENST00000488317 SLC15A4Q8N697 577 aa5.68□□□□□ -1.5
SRRM1-215ENST00000488317 FITM2Q8N6M3 262 aa5.68□□□□□ -1.5
SRRM1-215ENST00000488317 DNAJC5GQ8N7S2 189 aa5.68□□□□□ -1.5
SRRM1-215ENST00000488317 ZNF527Q8NB42 609 aa5.68□□□□□ -1.5
SRRM1-215ENST00000488317 SLC17A8Q8NDX2 589 aa5.68□□□□□ -1.5
SRRM1-215ENST00000488317 TBC1D15Q8TC07 691 aa5.68□□□□□ -1.5
SRRM1-215ENST00000488317 DDX17Q92841 729 aaKnown RBP5.68□□□□□ -1.5
SRRM1-215ENST00000488317 TRIM43Q96BQ3 446 aaPredicted RBP5.68□□□□□ -1.5
SRRM1-215ENST00000488317 PHACTR3Q96KR7 559 aa5.68□□□□□ -1.5
SRRM1-215ENST00000488317 DPH1Q9BZG8 443 aa5.68□□□□□ -1.5
SRRM1-215ENST00000488317 ADAM7Q9H2U9 754 aa5.68□□□□□ -1.5
SRRM1-215ENST00000488317 NELFAQ9H3P2 528 aa5.68□□□□□ -1.5
SRRM1-215ENST00000488317 SMURF2Q9HAU4 748 aa5.68□□□□□ -1.5
SRRM1-215ENST00000488317 GJB4Q9NTQ9 266 aa5.68□□□□□ -1.5
SRRM1-215ENST00000488317 FBXO34Q9NWN3 711 aa5.68□□□□□ -1.5
SRRM1-215ENST00000488317 POGKQ9P215 609 aa5.68□□□□□ -1.5
SRRM1-215ENST00000488317 TMX2Q9Y320 296 aa5.68□□□□□ -1.5
SRRM1-215ENST00000488317 PAXBP1Q9Y5B6 917 aa5.68□□□□□ -1.5
SRRM1-215ENST00000488317 PNPLA7Q6ZV29 1317 aa5.68□□□□□ -1.5
SRRM1-215ENST00000488317 CDHR4A6H8M9 788 aa5.67□□□□□ -1.5
SRRM1-215ENST00000488317 M0QYG6 137 aa5.67□□□□□ -1.5
SRRM1-215ENST00000488317 NOBOXO60393 691 aa5.67□□□□□ -1.5
SRRM1-215ENST00000488317 RASSF9O75901 435 aa5.67□□□□□ -1.5
SRRM1-215ENST00000488317 MT-ND5P03915 603 aa5.67□□□□□ -1.5
SRRM1-215ENST00000488317 ANXA1P04083 346 aa5.67□□□□□ -1.5
SRRM1-215ENST00000488317 ANXA2P07355 339 aaKnown RBP5.67□□□□□ -1.5
SRRM1-215ENST00000488317 FGFR2P21802 821 aa5.67□□□□□ -1.5
SRRM1-215ENST00000488317 HSPA7P48741 367 aa5.67□□□□□ -1.5
SRRM1-215ENST00000488317 PPP2CBP62714 309 aa5.67□□□□□ -1.5
SRRM1-215ENST00000488317 PPP2CAP67775 309 aa5.67□□□□□ -1.5
SRRM1-215ENST00000488317 POU6F2P78424 691 aaPredicted RBP5.67□□□□□ -1.5
SRRM1-215ENST00000488317 ICA1Q05084 483 aa5.67□□□□□ -1.5
SRRM1-215ENST00000488317 DUSP8Q13202 625 aa5.67□□□□□ -1.5
SRRM1-215ENST00000488317 GRM7Q14831 915 aa5.67□□□□□ -1.5
SRRM1-215ENST00000488317 CCDC38Q502W7 563 aa5.67□□□□□ -1.5
SRRM1-215ENST00000488317 MCTP1Q6DN14 999 aa5.67□□□□□ -1.5
SRRM1-215ENST00000488317 MFSD5Q6N075 450 aa5.67□□□□□ -1.5
SRRM1-215ENST00000488317 UNC13DQ70J99 1090 aa5.67□□□□□ -1.5
SRRM1-215ENST00000488317 RNF44Q7L0R7 432 aa5.67□□□□□ -1.5
SRRM1-215ENST00000488317 BEND5Q7L4P6 421 aa5.67□□□□□ -1.5
SRRM1-215ENST00000488317 USP37Q86T82 979 aa5.67□□□□□ -1.5
SRRM1-215ENST00000488317 SPATA5Q8NB90 893 aa5.67□□□□□ -1.5
SRRM1-215ENST00000488317 RNF169Q8NCN4 708 aa5.67□□□□□ -1.5
SRRM1-215ENST00000488317 MAML1Q92585 1016 aa5.67□□□□□ -1.5
SRRM1-215ENST00000488317 BORCS6Q96GS4 357 aa5.67□□□□□ -1.5
SRRM1-215ENST00000488317 TMEM41AQ96HV5 264 aa5.67□□□□□ -1.5
SRRM1-215ENST00000488317 IMPG2Q9BZV3 1241 aa5.67□□□□□ -1.5
SRRM1-215ENST00000488317 SIK2Q9H0K1 926 aa5.67□□□□□ -1.5
SRRM1-215ENST00000488317 A1CFQ9NQ94 594 aaKnown RBP5.67□□□□□ -1.5
SRRM1-215ENST00000488317 TBC1D23Q9NUY8 699 aa5.67□□□□□ -1.5
SRRM1-215ENST00000488317 USP40Q9NVE5 1235 aa5.67□□□□□ -1.5
SRRM1-215ENST00000488317 MYO1AQ9UBC5 1043 aa5.67□□□□□ -1.5
SRRM1-215ENST00000488317 PLEKHM1Q9Y4G2 1056 aa5.67□□□□□ -1.5
SRRM1-215ENST00000488317 A0A1W2PPC4 97 aa5.66□□□□□ -1.5
SRRM1-215ENST00000488317 PYCARD-AS1I3L0S3 204 aa5.66□□□□□ -1.5
SRRM1-215ENST00000488317 FFAR2O15552 330 aa5.66□□□□□ -1.5
SRRM1-215ENST00000488317 TYRP1P17643 537 aa5.66□□□□□ -1.5
SRRM1-215ENST00000488317 EEF1GP26641 437 aaKnown RBP5.66□□□□□ -1.5
SRRM1-215ENST00000488317 CARSP49589 748 aaKnown RBP5.66□□□□□ -1.5
SRRM1-215ENST00000488317 UCP3P55916 312 aa5.66□□□□□ -1.5
SRRM1-215ENST00000488317 BIRC3Q13489 604 aa5.66□□□□□ -1.5
SRRM1-215ENST00000488317 PUM3Q15397 648 aaKnown RBP5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms